RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.91□□□□□ -1.3
LINC00888-204ENST00000487386 DUSP15Q9H1R2 295 aaPredicted RBP6.91□□□□□ -1.3
LINC00888-204ENST00000487386 CCSER2Q9H7U1 834 aa6.91□□□□□ -1.3
LINC00888-204ENST00000487386 ADGRE2Q9UHX3 823 aa6.91□□□□□ -1.3
LINC00888-204ENST00000487386 EFR3BQ9Y2G0 817 aa6.91□□□□□ -1.3
LINC00888-204ENST00000487386 ACRP10323 421 aa6.9□□□□□ -1.3
LINC00888-204ENST00000487386 CBLL1Q75N03 491 aa6.9□□□□□ -1.3
LINC00888-204ENST00000487386 FERD3LQ96RJ6 166 aa6.9□□□□□ -1.3
LINC00888-204ENST00000487386 SLC9A7Q96T83 725 aa6.9□□□□□ -1.3
LINC00888-204ENST00000487386 GPR62Q9BZJ7 368 aa6.9□□□□□ -1.3
LINC00888-204ENST00000487386 H3BS24 57 aa6.89□□□□□ -1.31
LINC00888-204ENST00000487386 NBPF12Q5TAG4 269 aaPredicted RBP6.89□□□□□ -1.31
LINC00888-204ENST00000487386 TMEM192Q8IY95 271 aa6.89□□□□□ -1.31
LINC00888-204ENST00000487386 SEC16BQ96JE7 1060 aa6.89□□□□□ -1.31
LINC00888-204ENST00000487386 TM9SF2Q99805 663 aa6.89□□□□□ -1.31
LINC00888-204ENST00000487386 ATP13A1Q9HD20 1204 aa6.89□□□□□ -1.31
LINC00888-204ENST00000487386 LMCD1Q9NZU5 365 aa6.89□□□□□ -1.31
LINC00888-204ENST00000487386 KCNH3Q9ULD8 1083 aa6.89□□□□□ -1.31
LINC00888-204ENST00000487386 INPP5FQ9Y2H2 1132 aa6.89□□□□□ -1.31
LINC00888-204ENST00000487386 GAB4Q2WGN9 574 aa6.88□□□□□ -1.31
LINC00888-204ENST00000487386 ANGEL2Q5VTE6 544 aaKnown RBP6.88□□□□□ -1.31
LINC00888-204ENST00000487386 LSRQ86X29 649 aaPredicted RBP6.88□□□□□ -1.31
LINC00888-204ENST00000487386 UBE2FQ969M7 185 aa6.88□□□□□ -1.31
LINC00888-204ENST00000487386 GIPRP48546 466 aa6.87□□□□□ -1.31
LINC00888-204ENST00000487386 NASPP49321 788 aaPredicted RBP6.87□□□□□ -1.31
LINC00888-204ENST00000487386 RNF4P78317 190 aa6.87□□□□□ -1.31
LINC00888-204ENST00000487386 IKZF1Q13422 519 aa6.87□□□□□ -1.31
LINC00888-204ENST00000487386 CCDC81Q6ZN84 652 aa6.87□□□□□ -1.31
LINC00888-204ENST00000487386 MBNL3Q9NUK0 354 aaKnown RBP6.87□□□□□ -1.31
LINC00888-204ENST00000487386 ZSWIM5Q9P217 1185 aa6.87□□□□□ -1.31
LINC00888-204ENST00000487386 ADAMTS6Q9UKP5 1117 aa6.87□□□□□ -1.31
LINC00888-204ENST00000487386 WASH4PA8MWX3 477 aa6.86□□□□□ -1.31
LINC00888-204ENST00000487386 ESR1P03372 595 aa6.86□□□□□ -1.31
LINC00888-204ENST00000487386 ATF4P18848 351 aaPredicted RBP6.86□□□□□ -1.31
LINC00888-204ENST00000487386 PLCL1Q15111 1095 aa6.86□□□□□ -1.31
LINC00888-204ENST00000487386 ZNF792Q3KQV3 632 aa6.86□□□□□ -1.31
LINC00888-204ENST00000487386 LCE3BQ5TA77 95 aa6.86□□□□□ -1.31
LINC00888-204ENST00000487386 FBXW10Q5XX13 1052 aa6.86□□□□□ -1.31
LINC00888-204ENST00000487386 SLC23A3Q6PIS1 610 aa6.86□□□□□ -1.31
LINC00888-204ENST00000487386 RUFY4Q6ZNE9 571 aa6.86□□□□□ -1.31
LINC00888-204ENST00000487386 TMPRSS7Q7RTY8 843 aa6.86□□□□□ -1.31
LINC00888-204ENST00000487386 SHDQ96IW2 340 aa6.86□□□□□ -1.31
LINC00888-204ENST00000487386 SRRTQ9BXP5 876 aaKnown RBP6.86□□□□□ -1.31
LINC00888-204ENST00000487386 TRIT1Q9H3H1 467 aaKnown RBP6.86□□□□□ -1.31
LINC00888-204ENST00000487386 CLEC3AO75596 197 aa6.85□□□□□ -1.31
LINC00888-204ENST00000487386 RNASE1P07998 156 aaKnown RBP6.85□□□□□ -1.31
LINC00888-204ENST00000487386 GUCY2CP25092 1073 aa6.85□□□□□ -1.31
LINC00888-204ENST00000487386 EIF6P56537 245 aaKnown RBP6.85□□□□□ -1.31
LINC00888-204ENST00000487386 ZP2Q05996 745 aa6.85□□□□□ -1.31
LINC00888-204ENST00000487386 NBPF9Q3BBW0 867 aa6.85□□□□□ -1.31
LINC00888-204ENST00000487386 TSPYL5Q86VY4 417 aaPredicted RBP6.85□□□□□ -1.31
LINC00888-204ENST00000487386 OR6P1Q8NGX9 317 aa6.85□□□□□ -1.31
LINC00888-204ENST00000487386 PI4K2BQ8TCG2 481 aa6.85□□□□□ -1.31
LINC00888-204ENST00000487386 SLC6A18Q96N87 628 aa6.85□□□□□ -1.31
LINC00888-204ENST00000487386 TINF2Q9BSI4 451 aa6.85□□□□□ -1.31
LINC00888-204ENST00000487386 GPATCH2Q9NW75 528 aa6.85□□□□□ -1.31
LINC00888-204ENST00000487386 SUCOQ9UBS9 1254 aaKnown RBP6.85□□□□□ -1.31
LINC00888-204ENST00000487386 SHISA3A0PJX4 238 aa6.84□□□□□ -1.31
LINC00888-204ENST00000487386 TPP2P29144 1249 aaPredicted RBP6.84□□□□□ -1.31
LINC00888-204ENST00000487386 IRAK1P51617 712 aa6.84□□□□□ -1.31
LINC00888-204ENST00000487386 ZYXQ15942 572 aaKnown RBP6.84□□□□□ -1.31
LINC00888-204ENST00000487386 UNC5AQ6ZN44 842 aa6.84□□□□□ -1.31
LINC00888-204ENST00000487386 C19orf47Q8N9M1 422 aaKnown RBP6.84□□□□□ -1.31
LINC00888-204ENST00000487386 ENOX1Q8TC92 643 aaKnown RBP6.84□□□□□ -1.31
LINC00888-204ENST00000487386 DHRS1Q96LJ7 313 aa6.84□□□□□ -1.31
LINC00888-204ENST00000487386 CRBNQ96SW2 442 aa6.84□□□□□ -1.31
LINC00888-204ENST00000487386 CARS2Q9HA77 564 aaKnown RBP6.84□□□□□ -1.31
LINC00888-204ENST00000487386 CAPN10Q9HC96 672 aa6.84□□□□□ -1.31
LINC00888-204ENST00000487386 PMS1P54277 932 aaKnown RBP6.83□□□□□ -1.32
LINC00888-204ENST00000487386 CHMP4BP1P59074 171 aa6.83□□□□□ -1.32
LINC00888-204ENST00000487386 ZNF512BQ96KM6 892 aaPredicted RBP6.83□□□□□ -1.32
LINC00888-204ENST00000487386 PRDM7Q9NQW5 492 aa6.83□□□□□ -1.32
LINC00888-204ENST00000487386 STRIP2Q9ULQ0 834 aa6.83□□□□□ -1.32
LINC00888-204ENST00000487386 LTBP3Q9NS15 1303 aa6.82□□□□□ -1.32
LINC00888-204ENST00000487386 ITGB5P18084 799 aa6.82□□□□□ -1.32
LINC00888-204ENST00000487386 SNW1Q13573 536 aaKnown RBP6.82□□□□□ -1.32
LINC00888-204ENST00000487386 SLC43A3Q8NBI5 491 aa6.82□□□□□ -1.32
LINC00888-204ENST00000487386 HDAC8Q9BY41 377 aa6.82□□□□□ -1.32
LINC00888-204ENST00000487386 KRTAP9-9Q9BYP9 154 aa6.82□□□□□ -1.32
LINC00888-204ENST00000487386 KRTAP9-4Q9BYQ2 154 aa6.82□□□□□ -1.32
LINC00888-204ENST00000487386 A0A1W2PQH9 124 aa6.81□□□□□ -1.32
LINC00888-204ENST00000487386 FAM86C2PA6NEL3 165 aa6.81□□□□□ -1.32
LINC00888-204ENST00000487386 C9IYK1 514 aa6.81□□□□□ -1.32
LINC00888-204ENST00000487386 TAL1P17542 331 aaPredicted RBP6.81□□□□□ -1.32
LINC00888-204ENST00000487386 CASP7P55210 303 aa6.81□□□□□ -1.32
LINC00888-204ENST00000487386 NMIQ13287 307 aaPredicted RBP6.81□□□□□ -1.32
LINC00888-204ENST00000487386 MCTP1Q6DN14 999 aa6.81□□□□□ -1.32
LINC00888-204ENST00000487386 TMC3Q7Z5M5 1100 aa6.81□□□□□ -1.32
LINC00888-204ENST00000487386 TTC6Q86TZ1 520 aa6.81□□□□□ -1.32
LINC00888-204ENST00000487386 PPFIBP1Q86W92 1011 aa6.81□□□□□ -1.32
LINC00888-204ENST00000487386 VPS37DQ86XT2 251 aa6.81□□□□□ -1.32
LINC00888-204ENST00000487386 CREG2Q8IUH2 290 aa6.81□□□□□ -1.32
LINC00888-204ENST00000487386 FAM169BQ8N8A8 192 aa6.81□□□□□ -1.32
LINC00888-204ENST00000487386 DAGLBQ8NCG7 672 aa6.81□□□□□ -1.32
LINC00888-204ENST00000487386 LRRN4CLQ8ND94 238 aa6.81□□□□□ -1.32
LINC00888-204ENST00000487386 SYTL5Q8TDW5 730 aaPredicted RBP6.81□□□□□ -1.32
LINC00888-204ENST00000487386 PRDM14Q9GZV8 571 aa6.81□□□□□ -1.32
LINC00888-204ENST00000487386 DUSP13Q9UII6 198 aa6.81□□□□□ -1.32
LINC00888-204ENST00000487386 ZNF214Q9UL59 606 aaPredicted RBP6.81□□□□□ -1.32
LINC00888-204ENST00000487386 SHOXO15266 292 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms