RNA–Protein interactions for RNA: ENST00000487129.1

PFDN4-204, Transcript of prefoldin subunit 4, humanhuman

TSL 2

Gene PFDN4, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-204ENST00000487129 LRRC41Q15345 812 aa18.25■□□□□ 0.51
PFDN4-204ENST00000487129 FAM47AQ5JRC9 791 aa18.25■□□□□ 0.51
PFDN4-204ENST00000487129 TTC39AQ5SRH9 613 aa18.25■□□□□ 0.51
PFDN4-204ENST00000487129 TMEM265A0A087WTH1 108 aa18.24■□□□□ 0.51
PFDN4-204ENST00000487129 CYP7A1P22680 504 aa18.24■□□□□ 0.51
PFDN4-204ENST00000487129 POLA2Q14181 598 aa18.24■□□□□ 0.51
PFDN4-204ENST00000487129 ABCB5Q2M3G0 1257 aa18.24■□□□□ 0.51
PFDN4-204ENST00000487129 CERKLQ49MI3 558 aaPredicted RBP18.24■□□□□ 0.51
PFDN4-204ENST00000487129 PRAMEF19Q5SWL8 479 aa18.24■□□□□ 0.51
PFDN4-204ENST00000487129 MIGA1Q8NAN2 632 aa18.24■□□□□ 0.51
PFDN4-204ENST00000487129 STRNO43815 780 aa18.23■□□□□ 0.51
PFDN4-204ENST00000487129 GNAI2P04899 355 aa18.23■□□□□ 0.51
PFDN4-204ENST00000487129 ERCC3P19447 782 aa18.23■□□□□ 0.51
PFDN4-204ENST00000487129 PLCD1P51178 756 aa18.23■□□□□ 0.51
PFDN4-204ENST00000487129 EVX2Q03828 476 aa18.23■□□□□ 0.51
PFDN4-204ENST00000487129 TLE2Q04725 743 aa18.23■□□□□ 0.51
PFDN4-204ENST00000487129 GABPAQ06546 454 aa18.23■□□□□ 0.51
PFDN4-204ENST00000487129 KIAA1755Q5JYT7 1200 aa18.23■□□□□ 0.51
PFDN4-204ENST00000487129 DPP9Q86TI2 863 aa18.23■□□□□ 0.51
PFDN4-204ENST00000487129 SHCBP1Q8NEM2 672 aa18.23■□□□□ 0.51
PFDN4-204ENST00000487129 FERMT2Q96AC1 680 aa18.23■□□□□ 0.51
PFDN4-204ENST00000487129 SPATC1LQ9H0A9 340 aa18.23■□□□□ 0.51
PFDN4-204ENST00000487129 TLR7Q9NYK1 1049 aaKnown RBP18.23■□□□□ 0.51
PFDN4-204ENST00000487129 DBNLQ9UJU6 430 aaKnown RBP18.23■□□□□ 0.51
PFDN4-204ENST00000487129 TRIM27P14373 513 aa18.22■□□□□ 0.51
PFDN4-204ENST00000487129 HOXD11P31277 338 aaPredicted RBP18.22■□□□□ 0.51
PFDN4-204ENST00000487129 GRIN2CQ14957 1233 aa18.22■□□□□ 0.51
PFDN4-204ENST00000487129 SEPT2Q15019 361 aa18.22■□□□□ 0.51
PFDN4-204ENST00000487129 CCDC158Q5M9N0 1113 aa18.22■□□□□ 0.51
PFDN4-204ENST00000487129 PHF24Q9UPV7 400 aa18.22■□□□□ 0.51
PFDN4-204ENST00000487129 COG2Q14746 738 aa18.21■□□□□ 0.51
PFDN4-204ENST00000487129 SYMPKQ92797 1274 aaKnown RBP18.21■□□□□ 0.51
PFDN4-204ENST00000487129 MAML3Q96JK9 1138 aa18.21■□□□□ 0.51
PFDN4-204ENST00000487129 RNPC3Q96LT9 517 aaKnown RBP18.21■□□□□ 0.51
PFDN4-204ENST00000487129 KIAA0355O15063 1070 aa18.2■□□□□ 0.5
PFDN4-204ENST00000487129 USP5P45974 858 aa18.2■□□□□ 0.5
PFDN4-204ENST00000487129 ABRAQ8N0Z2 381 aa18.2■□□□□ 0.5
PFDN4-204ENST00000487129 SSH3Q8TE77 659 aa18.2■□□□□ 0.5
PFDN4-204ENST00000487129 RIOK1Q9BRS2 568 aaKnown RBP18.2■□□□□ 0.5
PFDN4-204ENST00000487129 ROBO3Q96MS0 1386 aa18.19■□□□□ 0.5
PFDN4-204ENST00000487129 IDH1O75874 414 aaKnown RBP18.19■□□□□ 0.5
PFDN4-204ENST00000487129 MYCNP04198 464 aaPredicted RBP18.19■□□□□ 0.5
PFDN4-204ENST00000487129 CLTBP09497 229 aa18.19■□□□□ 0.5
PFDN4-204ENST00000487129 TJAP1Q5JTD0 557 aa18.19■□□□□ 0.5
PFDN4-204ENST00000487129 TTC6Q86TZ1 520 aa18.19■□□□□ 0.5
PFDN4-204ENST00000487129 MAGEB6Q8N7X4 407 aa18.19■□□□□ 0.5
PFDN4-204ENST00000487129 ANTXR1Q9H6X2 564 aa18.19■□□□□ 0.5
PFDN4-204ENST00000487129 HOXC10Q9NYD6 342 aa18.19■□□□□ 0.5
PFDN4-204ENST00000487129 TACC3Q9Y6A5 838 aa18.19■□□□□ 0.5
PFDN4-204ENST00000487129 CHD9Q3L8U1 2897 aa18.18■□□□□ 0.5
PFDN4-204ENST00000487129 COL9A1P20849 921 aa18.18■□□□□ 0.5
PFDN4-204ENST00000487129 DNAJB2P25686 324 aa18.18■□□□□ 0.5
PFDN4-204ENST00000487129 CERS3Q8IU89 383 aa18.18■□□□□ 0.5
PFDN4-204ENST00000487129 SIAH1Q8IUQ4 282 aa18.18■□□□□ 0.5
PFDN4-204ENST00000487129 CABP5Q9NP86 173 aa18.18■□□□□ 0.5
PFDN4-204ENST00000487129 PARP14Q460N5 1801 aa18.17■□□□□ 0.5
PFDN4-204ENST00000487129 SMCHD1A6NHR9 2005 aa18.17■□□□□ 0.5
PFDN4-204ENST00000487129 DSG3P32926 999 aa18.17■□□□□ 0.5
PFDN4-204ENST00000487129 EAF2Q96CJ1 260 aaPredicted RBP18.17■□□□□ 0.5
PFDN4-204ENST00000487129 ATG4CQ96DT6 458 aa18.17■□□□□ 0.5
PFDN4-204ENST00000487129 TANGO6Q9C0B7 1094 aa18.17■□□□□ 0.5
PFDN4-204ENST00000487129 MROH8Q9H579 483 aa18.17■□□□□ 0.5
PFDN4-204ENST00000487129 XPNPEP3Q9NQH7 507 aa18.17■□□□□ 0.5
PFDN4-204ENST00000487129 RAPGEFL1Q9UHV5 662 aa18.17■□□□□ 0.5
PFDN4-204ENST00000487129 A0A1W2PQ45 241 aaPredicted RBP18.16■□□□□ 0.5
PFDN4-204ENST00000487129 A0A1W2PQY0 241 aa18.16■□□□□ 0.5
PFDN4-204ENST00000487129 TNFRSF10AO00220 468 aa18.16■□□□□ 0.5
PFDN4-204ENST00000487129 PGK1P00558 417 aa18.16■□□□□ 0.5
PFDN4-204ENST00000487129 TAL1P17542 331 aaPredicted RBP18.16■□□□□ 0.5
PFDN4-204ENST00000487129 MB21D1Q8N884 522 aa18.16■□□□□ 0.5
PFDN4-204ENST00000487129 LENG1Q96BZ8 264 aaPredicted RBP18.16■□□□□ 0.5
PFDN4-204ENST00000487129 CCDC8Q9H0W5 538 aaPredicted RBP18.16■□□□□ 0.5
PFDN4-204ENST00000487129 NRBP1Q9UHY1 535 aa18.16■□□□□ 0.5
PFDN4-204ENST00000487129 NOP58Q9Y2X3 529 aaKnown RBP18.16■□□□□ 0.5
PFDN4-204ENST00000487129 PQBP1O60828 265 aaKnown RBP18.15■□□□□ 0.5
PFDN4-204ENST00000487129 ADAMTS4O75173 837 aa18.15■□□□□ 0.5
PFDN4-204ENST00000487129 RAG1P15918 1043 aa18.15■□□□□ 0.5
PFDN4-204ENST00000487129 FPGSQ05932 587 aa18.15■□□□□ 0.5
PFDN4-204ENST00000487129 FAAP100Q0VG06 881 aa18.15■□□□□ 0.5
PFDN4-204ENST00000487129 TMEM132BQ14DG7 1078 aa18.15■□□□□ 0.5
PFDN4-204ENST00000487129 ANKRD33Q7Z3H0 272 aa18.15■□□□□ 0.5
PFDN4-204ENST00000487129 CLEC10AQ8IUN9 316 aa18.15■□□□□ 0.5
PFDN4-204ENST00000487129 SLC44A5Q8NCS7 719 aa18.15■□□□□ 0.5
PFDN4-204ENST00000487129 ZNF576Q9H609 170 aa18.15■□□□□ 0.5
PFDN4-204ENST00000487129 NAV1Q8NEY1 1877 aa18.15■□□□□ 0.5
PFDN4-204ENST00000487129 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.14■□□□□ 0.49
PFDN4-204ENST00000487129 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.14■□□□□ 0.49
PFDN4-204ENST00000487129 SURF6O75683 361 aaKnown RBP18.14■□□□□ 0.49
PFDN4-204ENST00000487129 ZNF865P0CJ78 1059 aaPredicted RBP18.14■□□□□ 0.49
PFDN4-204ENST00000487129 RARBP10826 455 aa18.14■□□□□ 0.49
PFDN4-204ENST00000487129 ATP8B2P98198 1209 aa18.14■□□□□ 0.49
PFDN4-204ENST00000487129 NCAPG2Q86XI2 1143 aa18.14■□□□□ 0.49
PFDN4-204ENST00000487129 CLUAP1Q96AJ1 413 aa18.14■□□□□ 0.49
PFDN4-204ENST00000487129 SLC5A4Q9NY91 659 aa18.14■□□□□ 0.49
PFDN4-204ENST00000487129 ADAMTS5Q9UNA0 930 aa18.14■□□□□ 0.49
PFDN4-204ENST00000487129 BCAR3O75815 825 aa18.13■□□□□ 0.49
PFDN4-204ENST00000487129 PGK2P07205 417 aa18.13■□□□□ 0.49
PFDN4-204ENST00000487129 FCER1AP12319 257 aa18.13■□□□□ 0.49
PFDN4-204ENST00000487129 PLS1Q14651 629 aa18.13■□□□□ 0.49
PFDN4-204ENST00000487129 ZNF792Q3KQV3 632 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms