RNA–Protein interactions for RNA: ENST00000486995.5

PTCD2-204, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 2,648 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-204ENST00000486995 NBPF5PQ86XG9 351 aaPredicted RBP14.05□□□□□ -0.16
PTCD2-204ENST00000486995 FANCGO15287 622 aa14.04□□□□□ -0.16
PTCD2-204ENST00000486995 SCG2P13521 617 aa14.04□□□□□ -0.16
PTCD2-204ENST00000486995 ELF2Q15723 593 aa14.04□□□□□ -0.16
PTCD2-204ENST00000486995 KMT5BQ4FZB7 885 aa14.04□□□□□ -0.16
PTCD2-204ENST00000486995 RCSD1Q6JBY9 416 aa14.04□□□□□ -0.16
PTCD2-204ENST00000486995 CCDC34Q96HJ3 373 aa14.04□□□□□ -0.16
PTCD2-204ENST00000486995 BAG1Q99933 345 aaPredicted RBP14.04□□□□□ -0.16
PTCD2-204ENST00000486995 ARPP21Q9UBL0 812 aaPredicted RBP14.04□□□□□ -0.16
PTCD2-204ENST00000486995 JAG2Q9Y219 1238 aa14.04□□□□□ -0.16
PTCD2-204ENST00000486995 IRS2Q9Y4H2 1338 aa14.04□□□□□ -0.16
PTCD2-204ENST00000486995 VWA3AA6NCI4 1184 aa14.04□□□□□ -0.16
PTCD2-204ENST00000486995 ADAMTS3O15072 1205 aa14.04□□□□□ -0.16
PTCD2-204ENST00000486995 RPS6KA4O75676 772 aa14.04□□□□□ -0.16
PTCD2-204ENST00000486995 ADKP55263 362 aaKnown RBP14.04□□□□□ -0.16
PTCD2-204ENST00000486995 CUL4BQ13620 913 aa14.04□□□□□ -0.16
PTCD2-204ENST00000486995 PFKFB3Q16875 520 aaPredicted RBP14.04□□□□□ -0.16
PTCD2-204ENST00000486995 RC3H1Q5TC82 1133 aaKnown RBP14.04□□□□□ -0.16
PTCD2-204ENST00000486995 APTXQ7Z2E3 356 aaKnown RBP14.04□□□□□ -0.16
PTCD2-204ENST00000486995 LRRN4CLQ8ND94 238 aa14.04□□□□□ -0.16
PTCD2-204ENST00000486995 PRDM10Q9NQV6 1147 aa14.04□□□□□ -0.16
PTCD2-204ENST00000486995 DNAI1Q9UI46 699 aa14.04□□□□□ -0.16
PTCD2-204ENST00000486995 PHLPP2Q6ZVD8 1323 aa14.04□□□□□ -0.16
PTCD2-204ENST00000486995 A0A1B0GTH6 734 aa14.03□□□□□ -0.16
PTCD2-204ENST00000486995 ZNF397Q8NF99 534 aaPredicted RBP14.03□□□□□ -0.16
PTCD2-204ENST00000486995 GSDMAQ96QA5 445 aa14.03□□□□□ -0.16
PTCD2-204ENST00000486995 OGFRQ9NZT2 677 aa14.03□□□□□ -0.16
PTCD2-204ENST00000486995 PPP2R2CQ9Y2T4 447 aa14.03□□□□□ -0.16
PTCD2-204ENST00000486995 TSPY2A6NKD2 308 aa14.03□□□□□ -0.16
PTCD2-204ENST00000486995 STX10O60499 249 aa14.03□□□□□ -0.16
PTCD2-204ENST00000486995 ZSCAN20P17040 1043 aaPredicted RBP14.03□□□□□ -0.16
PTCD2-204ENST00000486995 NLRP5P59047 1200 aa14.03□□□□□ -0.16
PTCD2-204ENST00000486995 SPATA1Q5VX52 437 aa14.03□□□□□ -0.16
PTCD2-204ENST00000486995 TPTE2Q6XPS3 522 aa14.03□□□□□ -0.16
PTCD2-204ENST00000486995 PIK3AP1Q6ZUJ8 805 aa14.03□□□□□ -0.16
PTCD2-204ENST00000486995 DDX41Q9UJV9 622 aaKnown RBP14.03□□□□□ -0.16
PTCD2-204ENST00000486995 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.03□□□□□ -0.16
PTCD2-204ENST00000486995 PPP1R3GB7ZBB8 358 aa14.02□□□□□ -0.16
PTCD2-204ENST00000486995 ZSCAN12O43309 604 aa14.02□□□□□ -0.16
PTCD2-204ENST00000486995 USP17L8P0C7I0 530 aa14.02□□□□□ -0.16
PTCD2-204ENST00000486995 E2F4Q16254 413 aa14.02□□□□□ -0.16
PTCD2-204ENST00000486995 IL17AQ16552 155 aa14.02□□□□□ -0.16
PTCD2-204ENST00000486995 TMED8Q6PL24 325 aaPredicted RBP14.02□□□□□ -0.16
PTCD2-204ENST00000486995 MCM9Q9NXL9 1143 aa14.02□□□□□ -0.16
PTCD2-204ENST00000486995 MKRN1Q9UHC7 482 aaKnown RBP14.02□□□□□ -0.16
PTCD2-204ENST00000486995 MYH13Q9UKX3 1938 aa14.02□□□□□ -0.17
PTCD2-204ENST00000486995 ZPR1O75312 459 aa14.02□□□□□ -0.17
PTCD2-204ENST00000486995 TRAPPC10P48553 1259 aa14.02□□□□□ -0.17
PTCD2-204ENST00000486995 STX17P56962 302 aa14.02□□□□□ -0.17
PTCD2-204ENST00000486995 KLHL10Q6JEL2 608 aa14.02□□□□□ -0.17
PTCD2-204ENST00000486995 FBXO38Q6PIJ6 1188 aa14.02□□□□□ -0.17
PTCD2-204ENST00000486995 SMYD4Q8IYR2 804 aaPredicted RBP14.02□□□□□ -0.17
PTCD2-204ENST00000486995 IL17RBQ9NRM6 502 aa14.02□□□□□ -0.17
PTCD2-204ENST00000486995 ZBTB22O15209 634 aa14.01□□□□□ -0.17
PTCD2-204ENST00000486995 GNPATO15228 680 aa14.01□□□□□ -0.17
PTCD2-204ENST00000486995 TEX33O43247 280 aa14.01□□□□□ -0.17
PTCD2-204ENST00000486995 ERCC6LQ2NKX8 1250 aa14.01□□□□□ -0.17
PTCD2-204ENST00000486995 SLC4A8Q2Y0W8 1093 aa14.01□□□□□ -0.17
PTCD2-204ENST00000486995 AMIGO3Q86WK7 504 aa14.01□□□□□ -0.17
PTCD2-204ENST00000486995 BAZ2BQ9UIF8 2168 aaKnown RBP14.01□□□□□ -0.17
PTCD2-204ENST00000486995 CDKAL1Q5VV42 579 aa14.01□□□□□ -0.17
PTCD2-204ENST00000486995 TOGARAM2Q6ZUX3 1019 aa14.01□□□□□ -0.17
PTCD2-204ENST00000486995 STAMQ92783 540 aa14.01□□□□□ -0.17
PTCD2-204ENST00000486995 XDHP47989 1333 aa14.01□□□□□ -0.17
PTCD2-204ENST00000486995 NPHP1O15259 732 aa14□□□□□ -0.17
PTCD2-204ENST00000486995 KIF5BP33176 963 aa14□□□□□ -0.17
PTCD2-204ENST00000486995 MCM7P33993 719 aa14□□□□□ -0.17
PTCD2-204ENST00000486995 TFAP4Q01664 338 aa14□□□□□ -0.17
PTCD2-204ENST00000486995 C12orf60Q5U649 245 aa14□□□□□ -0.17
PTCD2-204ENST00000486995 SLC51AQ86UW1 340 aa14□□□□□ -0.17
PTCD2-204ENST00000486995 DZIP1Q86YF9 867 aaKnown RBP14□□□□□ -0.17
PTCD2-204ENST00000486995 IQUBQ8NA54 791 aa14□□□□□ -0.17
PTCD2-204ENST00000486995 MTRQ99707 1265 aa14□□□□□ -0.17
PTCD2-204ENST00000486995 SYNRGQ9UMZ2 1314 aa14□□□□□ -0.17
PTCD2-204ENST00000486995 KIAA1551Q9HCM1 1747 aa14□□□□□ -0.17
PTCD2-204ENST00000486995 PBX1P40424 430 aa14□□□□□ -0.17
PTCD2-204ENST00000486995 SPTY2D1Q68D10 685 aaPredicted RBP14□□□□□ -0.17
PTCD2-204ENST00000486995 PDXDC2PQ6P474 469 aa14□□□□□ -0.17
PTCD2-204ENST00000486995 DGKHQ86XP1 1220 aa14□□□□□ -0.17
PTCD2-204ENST00000486995 C4orf32Q8N8J7 132 aa14□□□□□ -0.17
PTCD2-204ENST00000486995 KAT14Q9H8E8 782 aa14□□□□□ -0.17
PTCD2-204ENST00000486995 ADD3Q9UEY8 706 aaKnown RBP14□□□□□ -0.17
PTCD2-204ENST00000486995 LAMB1P07942 1786 aa13.99□□□□□ -0.17
PTCD2-204ENST00000486995 STAG2Q8N3U4 1231 aa13.99□□□□□ -0.17
PTCD2-204ENST00000486995 ANKS1AQ92625 1134 aa13.99□□□□□ -0.17
PTCD2-204ENST00000486995 ARHGEF1Q92888 912 aaKnown RBP13.99□□□□□ -0.17
PTCD2-204ENST00000486995 DYNLL2Q96FJ2 89 aa13.99□□□□□ -0.17
PTCD2-204ENST00000486995 BLZF1Q9H2G9 400 aa13.99□□□□□ -0.17
PTCD2-204ENST00000486995 PARP3Q9Y6F1 533 aa13.99□□□□□ -0.17
PTCD2-204ENST00000486995 COL24A1Q17RW2 1714 aa13.99□□□□□ -0.17
PTCD2-204ENST00000486995 FAM205AQ6ZU69 1335 aa13.98□□□□□ -0.17
PTCD2-204ENST00000486995 AKR1B15C9JRZ8 316 aaPredicted RBP13.98□□□□□ -0.17
PTCD2-204ENST00000486995 CALML3P27482 149 aa13.98□□□□□ -0.17
PTCD2-204ENST00000486995 BLIDQ8IZY5 108 aa13.98□□□□□ -0.17
PTCD2-204ENST00000486995 PNMA1Q8ND90 353 aa13.98□□□□□ -0.17
PTCD2-204ENST00000486995 SH3RF3Q8TEJ3 882 aaPredicted RBP13.98□□□□□ -0.17
PTCD2-204ENST00000486995 GPKOWQ92917 476 aaPredicted RBP eCLIP13.98□□□□□ -0.17
PTCD2-204ENST00000486995 SH3GLB2Q9NR46 395 aa13.98□□□□□ -0.17
PTCD2-204ENST00000486995 RTCBQ9Y3I0 505 aaKnown RBP13.98□□□□□ -0.17
PTCD2-204ENST00000486995 GOLGA6L9A6NEM1 432 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms