RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 A0A1W2PPC1 479 aa6.52□□□□□ -1.37
SF1-217ENST00000486960 FAM221BA6H8Z2 402 aa6.52□□□□□ -1.37
SF1-217ENST00000486960 PRSS47A8MTI9 375 aa6.52□□□□□ -1.37
SF1-217ENST00000486960 RASGRP1O95267 797 aa6.52□□□□□ -1.37
SF1-217ENST00000486960 TPM2P07951 284 aa6.52□□□□□ -1.37
SF1-217ENST00000486960 FOSL1P15407 271 aa6.52□□□□□ -1.37
SF1-217ENST00000486960 KCNA2P16389 499 aa6.52□□□□□ -1.37
SF1-217ENST00000486960 DDIT3P35638 169 aa6.52□□□□□ -1.37
SF1-217ENST00000486960 PIK3CAP42336 1068 aa6.52□□□□□ -1.37
SF1-217ENST00000486960 ZNF131P52739 623 aa6.52□□□□□ -1.37
SF1-217ENST00000486960 NUCB1Q02818 461 aa6.52□□□□□ -1.37
SF1-217ENST00000486960 EHHADHQ08426 723 aa6.52□□□□□ -1.37
SF1-217ENST00000486960 PAK2Q13177 524 aa6.52□□□□□ -1.37
SF1-217ENST00000486960 RAB33AQ14088 237 aa6.52□□□□□ -1.37
SF1-217ENST00000486960 DSC3Q14574 896 aa6.52□□□□□ -1.37
SF1-217ENST00000486960 RASA3Q14644 834 aa6.52□□□□□ -1.37
SF1-217ENST00000486960 OCLNQ16625 522 aa6.52□□□□□ -1.37
SF1-217ENST00000486960 MMS22LQ6ZRQ5 1243 aa6.52□□□□□ -1.37
SF1-217ENST00000486960 IFNL2Q8IZJ0 200 aa6.52□□□□□ -1.37
SF1-217ENST00000486960 LRRN4Q8WUT4 740 aa6.52□□□□□ -1.37
SF1-217ENST00000486960 CRELD1Q96HD1 420 aa6.52□□□□□ -1.37
SF1-217ENST00000486960 CCDC34Q96HJ3 373 aa6.52□□□□□ -1.37
SF1-217ENST00000486960 CITED4Q96RK1 184 aa6.52□□□□□ -1.37
SF1-217ENST00000486960 HERPUD2Q9BSE4 406 aa6.52□□□□□ -1.37
SF1-217ENST00000486960 C2orf49Q9BVC5 232 aaPredicted RBP6.52□□□□□ -1.37
SF1-217ENST00000486960 TMEM121BQ9BXQ6 578 aaPredicted RBP6.52□□□□□ -1.37
SF1-217ENST00000486960 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.52□□□□□ -1.374e-32■□□□□ 10.8
SF1-217ENST00000486960 CSRNP2Q9H175 543 aa6.52□□□□□ -1.37
SF1-217ENST00000486960 CDHR5Q9HBB8 845 aa6.52□□□□□ -1.37
SF1-217ENST00000486960 GJA3Q9Y6H8 435 aa6.52□□□□□ -1.37
SF1-217ENST00000486960 WTIPA6NIX2 430 aaPredicted RBP6.51□□□□□ -1.37
SF1-217ENST00000486960 SNPHO15079 494 aa6.51□□□□□ -1.37
SF1-217ENST00000486960 FAM13AO94988 1023 aa6.51□□□□□ -1.37
SF1-217ENST00000486960 IGHDP01880 384 aa6.51□□□□□ -1.37
SF1-217ENST00000486960 NBPF7P0C2Y1 421 aaPredicted RBP6.51□□□□□ -1.37
SF1-217ENST00000486960 VARSP26640 1264 aaKnown RBP6.51□□□□□ -1.37
SF1-217ENST00000486960 CASQ1P31415 396 aa6.51□□□□□ -1.37
SF1-217ENST00000486960 EPS15P42566 896 aa6.51□□□□□ -1.37
SF1-217ENST00000486960 SARSP49591 514 aaKnown RBP6.51□□□□□ -1.37
SF1-217ENST00000486960 HUNKP57058 714 aa6.51□□□□□ -1.37
SF1-217ENST00000486960 GPSM2P81274 684 aa6.51□□□□□ -1.37
SF1-217ENST00000486960 CAP1Q01518 475 aa6.51□□□□□ -1.37
SF1-217ENST00000486960 PTPN12Q05209 780 aaKnown RBP6.51□□□□□ -1.37
SF1-217ENST00000486960 MCL1Q07820 350 aa6.51□□□□□ -1.37
SF1-217ENST00000486960 NEUROD1Q13562 356 aa6.51□□□□□ -1.37
SF1-217ENST00000486960 NCOA4Q13772 614 aa6.51□□□□□ -1.37
SF1-217ENST00000486960 SPECC1Q5M775 1068 aa6.51□□□□□ -1.37
SF1-217ENST00000486960 ARMC3Q5W041 872 aa6.51□□□□□ -1.37
SF1-217ENST00000486960 TSHZ3Q63HK5 1081 aa6.51□□□□□ -1.37
SF1-217ENST00000486960 INTS3Q68E01 1043 aaKnown RBP6.51□□□□□ -1.37
SF1-217ENST00000486960 PPP4R3AQ6IN85 833 aa6.51□□□□□ -1.37
SF1-217ENST00000486960 BICDL1Q6ZP65 573 aa6.51□□□□□ -1.37
SF1-217ENST00000486960 CCDC73Q6ZRK6 1079 aa6.51□□□□□ -1.37
SF1-217ENST00000486960 SLF2Q8IX21 1173 aa6.51□□□□□ -1.37
SF1-217ENST00000486960 PLPP6Q8IY26 295 aa6.51□□□□□ -1.37
SF1-217ENST00000486960 OGFOD1Q8N543 542 aa6.51□□□□□ -1.37
SF1-217ENST00000486960 EPS8L1Q8TE68 723 aa6.51□□□□□ -1.37
SF1-217ENST00000486960 SEC16BQ96JE7 1060 aa6.51□□□□□ -1.37
SF1-217ENST00000486960 DMRTB1Q96MA1 342 aa6.51□□□□□ -1.37
SF1-217ENST00000486960 NBPF3Q9H094 633 aa6.51□□□□□ -1.37
SF1-217ENST00000486960 TAOK3Q9H2K8 898 aa6.51□□□□□ -1.37
SF1-217ENST00000486960 RIC8AQ9NPQ8 531 aa6.51□□□□□ -1.37
SF1-217ENST00000486960 ATG3Q9NT62 314 aa6.51□□□□□ -1.37
SF1-217ENST00000486960 TMEM260Q9NX78 707 aa6.51□□□□□ -1.37
SF1-217ENST00000486960 SEPT3Q9UH03 358 aa6.51□□□□□ -1.37
SF1-217ENST00000486960 MCM8Q9UJA3 840 aa6.51□□□□□ -1.37
SF1-217ENST00000486960 USP31Q70CQ4 1352 aa6.51□□□□□ -1.37
SF1-217ENST00000486960 ZNF831Q5JPB2 1677 aa6.51□□□□□ -1.37
SF1-217ENST00000486960 LAMB2P55268 1798 aa6.5□□□□□ -1.37
SF1-217ENST00000486960 LOC102724428A0A0B4J2F2 783 aa6.5□□□□□ -1.37
SF1-217ENST00000486960 ZBTB7BO15156 539 aaPredicted RBP6.5□□□□□ -1.37
SF1-217ENST00000486960 ZBTB24O43167 697 aaPredicted RBP6.5□□□□□ -1.37
SF1-217ENST00000486960 SCNN1DP51172 638 aa6.5□□□□□ -1.37
SF1-217ENST00000486960 SIK1P57059 783 aa6.5□□□□□ -1.37
SF1-217ENST00000486960 KIAA2012Q0VF49 1180 aa6.5□□□□□ -1.37
SF1-217ENST00000486960 NR1H3Q13133 447 aa6.5□□□□□ -1.37
SF1-217ENST00000486960 WDR45BQ5MNZ6 344 aa6.5□□□□□ -1.37
SF1-217ENST00000486960 TRAPPC3LQ5T215 181 aa6.5□□□□□ -1.37
SF1-217ENST00000486960 IQCEQ6IPM2 695 aa6.5□□□□□ -1.37
SF1-217ENST00000486960 CFAP161Q6P656 301 aa6.5□□□□□ -1.37
SF1-217ENST00000486960 MPRIPQ6WCQ1 1025 aa6.5□□□□□ -1.37
SF1-217ENST00000486960 CATIPQ7Z7H3 387 aa6.5□□□□□ -1.37
SF1-217ENST00000486960 LILRB2Q8N423 598 aa6.5□□□□□ -1.37
SF1-217ENST00000486960 DNAJC7Q99615 494 aa6.5□□□□□ -1.37
SF1-217ENST00000486960 KMT5AQ9NQR1 393 aa6.5□□□□□ -1.37
SF1-217ENST00000486960 C9orf78Q9NZ63 289 aaPredicted RBP6.5□□□□□ -1.37
SF1-217ENST00000486960 ZIM2Q9NZV7 527 aa6.5□□□□□ -1.37
SF1-217ENST00000486960 STAP2Q9UGK3 403 aa6.5□□□□□ -1.37
SF1-217ENST00000486960 GGT7Q9UJ14 662 aa6.5□□□□□ -1.37
SF1-217ENST00000486960 TRAK1Q9UPV9 953 aa6.5□□□□□ -1.37
SF1-217ENST00000486960 R3HCC1Q9Y3T6 440 aaKnown RBP6.5□□□□□ -1.37
SF1-217ENST00000486960 ZSWIM8A7E2V4 1837 aa6.5□□□□□ -1.37
SF1-217ENST00000486960 WASHC2AQ641Q2 1341 aa6.5□□□□□ -1.37
SF1-217ENST00000486960 TRIM64CA6NLI5 447 aa6.49□□□□□ -1.37
SF1-217ENST00000486960 GOLGA6L22H0YM25 854 aa6.49□□□□□ -1.37
SF1-217ENST00000486960 GPR25O00155 361 aa6.49□□□□□ -1.37
SF1-217ENST00000486960 CD46P15529 392 aa6.49□□□□□ -1.37
SF1-217ENST00000486960 GNA15P30679 374 aa6.49□□□□□ -1.37
SF1-217ENST00000486960 ST13P50502 369 aaKnown RBP6.49□□□□□ -1.37
SF1-217ENST00000486960 RAB27AP51159 221 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms