RNA–Protein interactions for RNA: ENST00000486704.1

HDAC8-218, Transcript of histone deacetylase 8, humanhuman

TSL 2

Gene HDAC8, Length 330 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-218ENST00000486704 TNRC18O15417 2968 aaPredicted RBP19.02■□□□□ 0.63
HDAC8-218ENST00000486704 SLC3A2P08195 630 aaKnown RBP19.01■□□□□ 0.63
HDAC8-218ENST00000486704 EEF2P13639 858 aaKnown RBP19.01■□□□□ 0.63
HDAC8-218ENST00000486704 PDE4AP27815 886 aa19.01■□□□□ 0.63
HDAC8-218ENST00000486704 ERVK-9P63128 1117 aa19.01■□□□□ 0.63
HDAC8-218ENST00000486704 ERVK-24P63145 666 aa19.01■□□□□ 0.63
HDAC8-218ENST00000486704 NMIQ13287 307 aaPredicted RBP19.01■□□□□ 0.63
HDAC8-218ENST00000486704 POTEEQ6S8J3 1075 aa19.01■□□□□ 0.63
HDAC8-218ENST00000486704 COA7Q96BR5 231 aa19.01■□□□□ 0.63
HDAC8-218ENST00000486704 GABRQQ9UN88 632 aa19.01■□□□□ 0.63
HDAC8-218ENST00000486704 RABGAP1Q9Y3P9 1069 aa19.01■□□□□ 0.63
HDAC8-218ENST00000486704 CCDC171Q6TFL3 1326 aa19■□□□□ 0.63
HDAC8-218ENST00000486704 IGKV6D-41A0A0C4DH26 115 aa19■□□□□ 0.63
HDAC8-218ENST00000486704 WDR46O15213 610 aaKnown RBP19■□□□□ 0.63
HDAC8-218ENST00000486704 SDSP20132 328 aa19■□□□□ 0.63
HDAC8-218ENST00000486704 GRK4P32298 578 aa19■□□□□ 0.63
HDAC8-218ENST00000486704 FLT3LGP49771 235 aa19■□□□□ 0.63
HDAC8-218ENST00000486704 MLLT1Q03111 559 aaPredicted RBP19■□□□□ 0.63
HDAC8-218ENST00000486704 PDE4BQ07343 736 aa19■□□□□ 0.63
HDAC8-218ENST00000486704 KIAA1755Q5JYT7 1200 aa19■□□□□ 0.63
HDAC8-218ENST00000486704 VPS53Q5VIR6 699 aa19■□□□□ 0.63
HDAC8-218ENST00000486704 ZNF589Q86UQ0 364 aaPredicted RBP19■□□□□ 0.63
HDAC8-218ENST00000486704 SLAIN1Q8ND83 568 aa19■□□□□ 0.63
HDAC8-218ENST00000486704 SH3TC2Q8TF17 1288 aa19■□□□□ 0.63
HDAC8-218ENST00000486704 NYAP2Q9P242 653 aa19■□□□□ 0.63
HDAC8-218ENST00000486704 ANAPC4Q9UJX5 808 aa19■□□□□ 0.63
HDAC8-218ENST00000486704 SPDYE16A6NNV3 312 aaPredicted RBP18.99■□□□□ 0.63
HDAC8-218ENST00000486704 HIP1O00291 1037 aa18.99■□□□□ 0.63
HDAC8-218ENST00000486704 MFAP1P55081 439 aaKnown RBP18.99■□□□□ 0.63
HDAC8-218ENST00000486704 PXYLP1Q8TE99 480 aa18.99■□□□□ 0.63
HDAC8-218ENST00000486704 TANGO6Q9C0B7 1094 aa18.99■□□□□ 0.63
HDAC8-218ENST00000486704 GOPCQ9HD26 462 aa18.99■□□□□ 0.63
HDAC8-218ENST00000486704 SYNPO2Q9UMS6 1093 aa18.99■□□□□ 0.63
HDAC8-218ENST00000486704 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.99■□□□□ 0.63
HDAC8-218ENST00000486704 CNMDO75829 334 aa18.98■□□□□ 0.63
HDAC8-218ENST00000486704 MAPK4P31152 587 aa18.98■□□□□ 0.63
HDAC8-218ENST00000486704 TTC22Q5TAA0 569 aa18.98■□□□□ 0.63
HDAC8-218ENST00000486704 ZNF444Q8N0Y2 327 aaPredicted RBP18.98■□□□□ 0.63
HDAC8-218ENST00000486704 STK11IPQ8N1F8 1099 aa18.98■□□□□ 0.63
HDAC8-218ENST00000486704 PAGR1Q9BTK6 254 aa18.98■□□□□ 0.63
HDAC8-218ENST00000486704 BRCA2P51587 3418 aa18.98■□□□□ 0.63
HDAC8-218ENST00000486704 ADCY3O60266 1144 aa18.97■□□□□ 0.63
HDAC8-218ENST00000486704 PEX10O60683 326 aa18.97■□□□□ 0.63
HDAC8-218ENST00000486704 PRDM1O75626 825 aa18.97■□□□□ 0.63
HDAC8-218ENST00000486704 HSPD1P10809 573 aaKnown RBP18.97■□□□□ 0.63
HDAC8-218ENST00000486704 COG2Q14746 738 aa18.97■□□□□ 0.63
HDAC8-218ENST00000486704 NEDD1Q8NHV4 660 aa18.97■□□□□ 0.63
HDAC8-218ENST00000486704 SOCS4Q8WXH5 440 aa18.97■□□□□ 0.63
HDAC8-218ENST00000486704 DIAPH3Q9NSV4 1193 aa18.97■□□□□ 0.63
HDAC8-218ENST00000486704 HOXC10Q9NYD6 342 aa18.97■□□□□ 0.63
HDAC8-218ENST00000486704 GJD2Q9UKL4 321 aa18.97■□□□□ 0.63
HDAC8-218ENST00000486704 POTEFA5A3E0 1075 aa18.96■□□□□ 0.63
HDAC8-218ENST00000486704 GSPT1P15170 499 aaKnown RBP18.96■□□□□ 0.63
HDAC8-218ENST00000486704 CCNA1P78396 465 aa18.96■□□□□ 0.63
HDAC8-218ENST00000486704 ATP2B2Q01814 1243 aa18.96■□□□□ 0.63
HDAC8-218ENST00000486704 Q3C1V9 767 aa18.96■□□□□ 0.63
HDAC8-218ENST00000486704 SPICE1Q8N0Z3 855 aa18.96■□□□□ 0.63
HDAC8-218ENST00000486704 MB21D1Q8N884 522 aa18.96■□□□□ 0.63
HDAC8-218ENST00000486704 TMEM106CQ9BVX2 250 aa18.96■□□□□ 0.63
HDAC8-218ENST00000486704 PORCNQ9H237 461 aa18.96■□□□□ 0.63
HDAC8-218ENST00000486704 MTMR4Q9NYA4 1195 aa18.96■□□□□ 0.63
HDAC8-218ENST00000486704 ORC4O43929 436 aa18.95■□□□□ 0.62
HDAC8-218ENST00000486704 FGAP02671 866 aa18.95■□□□□ 0.62
HDAC8-218ENST00000486704 FGRP09769 529 aa18.95■□□□□ 0.62
HDAC8-218ENST00000486704 TSPY3P0CV98 308 aa18.95■□□□□ 0.62
HDAC8-218ENST00000486704 TSPY8P0CW00 308 aa18.95■□□□□ 0.62
HDAC8-218ENST00000486704 MKL1Q969V6 931 aa18.95■□□□□ 0.62
HDAC8-218ENST00000486704 CEP95Q96GE4 821 aa18.95■□□□□ 0.62
HDAC8-218ENST00000486704 BTBD7Q9P203 1132 aa18.95■□□□□ 0.62
HDAC8-218ENST00000486704 FLOT1O75955 427 aa18.94■□□□□ 0.62
HDAC8-218ENST00000486704 TTLL1O95922 423 aa18.94■□□□□ 0.62
HDAC8-218ENST00000486704 DSG3P32926 999 aa18.94■□□□□ 0.62
HDAC8-218ENST00000486704 UBXN2AP68543 259 aa18.94■□□□□ 0.62
HDAC8-218ENST00000486704 CTDSPL2Q05D32 466 aa18.94■□□□□ 0.62
HDAC8-218ENST00000486704 PPP4R3BQ5MIZ7 849 aa18.94■□□□□ 0.62
HDAC8-218ENST00000486704 GPR142Q7Z601 462 aa18.94■□□□□ 0.62
HDAC8-218ENST00000486704 PCP11498 1178 aaKnown RBP18.93■□□□□ 0.62
HDAC8-218ENST00000486704 XRCC5P13010 732 aaKnown RBP18.93■□□□□ 0.62
HDAC8-218ENST00000486704 ELNP15502 786 aa18.93■□□□□ 0.62
HDAC8-218ENST00000486704 TFAP4Q01664 338 aa18.93■□□□□ 0.62
HDAC8-218ENST00000486704 CWC27Q6UX04 472 aaKnown RBP18.93■□□□□ 0.62
HDAC8-218ENST00000486704 PLEKHH3Q7Z736 793 aa18.93■□□□□ 0.62
HDAC8-218ENST00000486704 CCAR1Q8IX12 1150 aaKnown RBP18.93■□□□□ 0.62
HDAC8-218ENST00000486704 USP6NLQ92738 828 aa18.93■□□□□ 0.62
HDAC8-218ENST00000486704 NUDT12Q9BQG2 462 aa18.93■□□□□ 0.62
HDAC8-218ENST00000486704 ADAMTS5Q9UNA0 930 aa18.93■□□□□ 0.62
HDAC8-218ENST00000486704 ZNFX1Q9P2E3 1918 aaKnown RBP18.93■□□□□ 0.62
HDAC8-218ENST00000486704 PDE4DIPQ5VU43 2346 aa18.92■□□□□ 0.62
HDAC8-218ENST00000486704 F5H6K3 240 aa18.92■□□□□ 0.62
HDAC8-218ENST00000486704 NDUFB10O96000 172 aa18.92■□□□□ 0.62
HDAC8-218ENST00000486704 INHAP05111 366 aa18.92■□□□□ 0.62
HDAC8-218ENST00000486704 KLRC3Q07444 240 aa18.92■□□□□ 0.62
HDAC8-218ENST00000486704 MTFR1Q15390 333 aa18.92■□□□□ 0.62
HDAC8-218ENST00000486704 FAM47AQ5JRC9 791 aa18.92■□□□□ 0.62
HDAC8-218ENST00000486704 MORN1Q5T089 497 aa18.92■□□□□ 0.62
HDAC8-218ENST00000486704 GMCL1P1Q8NEA9 526 aa18.92■□□□□ 0.62
HDAC8-218ENST00000486704 SHCBP1Q8NEM2 672 aa18.92■□□□□ 0.62
HDAC8-218ENST00000486704 ATG4CQ96DT6 458 aa18.92■□□□□ 0.62
HDAC8-218ENST00000486704 CLIP2Q9UDT6 1046 aa18.92■□□□□ 0.62
HDAC8-218ENST00000486704 TACC3Q9Y6A5 838 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms