RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 VGLL4Q14135 290 aa15.03■□□□□ -0
HDAC6-229ENST00000486665 RAB3GAP1Q15042 981 aa15.03■□□□□ -0
HDAC6-229ENST00000486665 SEC23AQ15436 765 aa15.03■□□□□ -0
HDAC6-229ENST00000486665 NOL9Q5SY16 702 aaKnown RBP15.03■□□□□ -0
HDAC6-229ENST00000486665 RCSD1Q6JBY9 416 aa15.03■□□□□ -0
HDAC6-229ENST00000486665 Q6ZUG5 572 aa15.03■□□□□ -0
HDAC6-229ENST00000486665 TMEM179Q6ZVK1 233 aa15.03■□□□□ -0
HDAC6-229ENST00000486665 SCYL3Q8IZE3 742 aa15.03■□□□□ -0
HDAC6-229ENST00000486665 TSHZ2Q9NRE2 1034 aa15.03■□□□□ -0
HDAC6-229ENST00000486665 MTMR4Q9NYA4 1195 aa15.03■□□□□ -0
HDAC6-229ENST00000486665 SNCAIPQ9Y6H5 919 aa15.03■□□□□ -0
HDAC6-229ENST00000486665 PLIN4Q96Q06 1357 aa15.02■□□□□ -0
HDAC6-229ENST00000486665 TNKSO95271 1327 aa15.02■□□□□ -0
HDAC6-229ENST00000486665 WDR19Q8NEZ3 1342 aa15.02■□□□□ -0
HDAC6-229ENST00000486665 TESPA1A2RU30 521 aaPredicted RBP15.02■□□□□ -0
HDAC6-229ENST00000486665 SH2B2O14492 632 aaPredicted RBP15.02■□□□□ -0
HDAC6-229ENST00000486665 TMEM67Q5HYA8 995 aa15.02■□□□□ -0
HDAC6-229ENST00000486665 IQCA1Q86XH1 822 aa15.02■□□□□ -0
HDAC6-229ENST00000486665 ANKRD13AQ8IZ07 590 aa15.02■□□□□ -0
HDAC6-229ENST00000486665 ENAHQ8N8S7 591 aaPredicted RBP15.02■□□□□ -0
HDAC6-229ENST00000486665 ANKS1AQ92625 1134 aa15.02■□□□□ -0
HDAC6-229ENST00000486665 OPTNQ96CV9 577 aa15.02■□□□□ -0
HDAC6-229ENST00000486665 MS4A4AQ96JQ5 239 aa15.02■□□□□ -0
HDAC6-229ENST00000486665 LARP6Q9BRS8 491 aaKnown RBP15.02■□□□□ -0
HDAC6-229ENST00000486665 UBAC1Q9BSL1 405 aa15.02■□□□□ -0
HDAC6-229ENST00000486665 LY9Q9HBG7 655 aa15.02■□□□□ -0
HDAC6-229ENST00000486665 UNCXA6NJT0 531 aa15.01□□□□□ -0.01
HDAC6-229ENST00000486665 ASNSP08243 561 aa15.01□□□□□ -0.01
HDAC6-229ENST00000486665 EEF2P13639 858 aaKnown RBP15.01□□□□□ -0.01
HDAC6-229ENST00000486665 PTPRAP18433 802 aa15.01□□□□□ -0.01
HDAC6-229ENST00000486665 TOB2Q14106 344 aaPredicted RBP15.01□□□□□ -0.01
HDAC6-229ENST00000486665 ACER1Q8TDN7 264 aa15.01□□□□□ -0.01
HDAC6-229ENST00000486665 BRI3BPQ8WY22 251 aa15.01□□□□□ -0.01
HDAC6-229ENST00000486665 TMEM87BQ96K49 555 aa15.01□□□□□ -0.01
HDAC6-229ENST00000486665 ALDH8A1Q9H2A2 487 aaPredicted RBP15.01□□□□□ -0.01
HDAC6-229ENST00000486665 KANSL2Q9H9L4 492 aa15.01□□□□□ -0.01
HDAC6-229ENST00000486665 GINM1Q9NU53 330 aa15.01□□□□□ -0.01
HDAC6-229ENST00000486665 CLIP2Q9UDT6 1046 aa15.01□□□□□ -0.01
HDAC6-229ENST00000486665 PTPN22Q9Y2R2 807 aa15.01□□□□□ -0.01
HDAC6-229ENST00000486665 A0A1W2PRG0 241 aa15□□□□□ -0.01
HDAC6-229ENST00000486665 AK2P54819 239 aa15□□□□□ -0.01
HDAC6-229ENST00000486665 ATP2B2Q01814 1243 aa15□□□□□ -0.01
HDAC6-229ENST00000486665 WTAPQ15007 396 aa15□□□□□ -0.01
HDAC6-229ENST00000486665 DGKHQ86XP1 1220 aa15□□□□□ -0.01
HDAC6-229ENST00000486665 FBXL16Q8N461 479 aa15□□□□□ -0.01
HDAC6-229ENST00000486665 TMEM47Q9BQJ4 181 aa15□□□□□ -0.01
HDAC6-229ENST00000486665 MTA3Q9BTC8 594 aa15□□□□□ -0.01
HDAC6-229ENST00000486665 AGXT2Q9BYV1 514 aa15□□□□□ -0.01
HDAC6-229ENST00000486665 PICK1Q9NRD5 415 aa15□□□□□ -0.01
HDAC6-229ENST00000486665 NYAP2Q9P242 653 aa15□□□□□ -0.01
HDAC6-229ENST00000486665 STX8Q9UNK0 236 aa15□□□□□ -0.01
HDAC6-229ENST00000486665 CSADQ9Y600 493 aa15□□□□□ -0.01
HDAC6-229ENST00000486665 USP17L5A8MUK1 530 aa14.99□□□□□ -0.01
HDAC6-229ENST00000486665 CD2BP2O95400 341 aaKnown RBP14.99□□□□□ -0.01
HDAC6-229ENST00000486665 TTLL1O95922 423 aa14.99□□□□□ -0.01
HDAC6-229ENST00000486665 LIFRP42702 1097 aa14.99□□□□□ -0.01
HDAC6-229ENST00000486665 ICA1Q05084 483 aa14.99□□□□□ -0.01
HDAC6-229ENST00000486665 APOBRQ0VD83 1088 aa14.99□□□□□ -0.01
HDAC6-229ENST00000486665 SART3Q15020 963 aaKnown RBP14.99□□□□□ -0.01
HDAC6-229ENST00000486665 CCDC178Q5BJE1 867 aa14.99□□□□□ -0.01
HDAC6-229ENST00000486665 BRF1Q92994 677 aa14.99□□□□□ -0.01
HDAC6-229ENST00000486665 MKL1Q969V6 931 aa14.99□□□□□ -0.01
HDAC6-229ENST00000486665 ERO1AQ96HE7 468 aa14.99□□□□□ -0.01
HDAC6-229ENST00000486665 BRPF3Q9ULD4 1205 aa14.99□□□□□ -0.01
HDAC6-229ENST00000486665 ZHX2Q9Y6X8 837 aa14.99□□□□□ -0.01
HDAC6-229ENST00000486665 GREB1LQ9C091 1923 aaPredicted RBP14.98□□□□□ -0.01
HDAC6-229ENST00000486665 ERICH2A1L162 156 aa14.98□□□□□ -0.01
HDAC6-229ENST00000486665 TOP1P11387 765 aaKnown RBP14.98□□□□□ -0.01
HDAC6-229ENST00000486665 FGD1P98174 961 aa14.98□□□□□ -0.01
HDAC6-229ENST00000486665 SP3Q02447 781 aa14.98□□□□□ -0.01
HDAC6-229ENST00000486665 IFIT1BQ5T764 474 aaKnown RBP14.98□□□□□ -0.01
HDAC6-229ENST00000486665 NOL8Q76FK4 1167 aaKnown RBP14.98□□□□□ -0.01
HDAC6-229ENST00000486665 LRRC47Q8N1G4 583 aaKnown RBP14.98□□□□□ -0.01
HDAC6-229ENST00000486665 FAM43AQ8N2R8 423 aa14.98□□□□□ -0.01
HDAC6-229ENST00000486665 WDR18Q9BV38 432 aa14.98□□□□□ -0.01
HDAC6-229ENST00000486665 EFCC1Q9HA90 598 aa14.98□□□□□ -0.01
HDAC6-229ENST00000486665 PCDH10Q9P2E7 1040 aa14.98□□□□□ -0.01
HDAC6-229ENST00000486665 AFG3L2Q9Y4W6 797 aa14.98□□□□□ -0.01
HDAC6-229ENST00000486665 CCL15-CCL14A0A0B4J2E2 113 aa14.97□□□□□ -0.01
HDAC6-229ENST00000486665 EN2P19622 333 aaPredicted RBP14.97□□□□□ -0.01
HDAC6-229ENST00000486665 SPP2Q13103 211 aa14.97□□□□□ -0.01
HDAC6-229ENST00000486665 CCL15Q16663 113 aa14.97□□□□□ -0.01
HDAC6-229ENST00000486665 NFXL1Q6ZNB6 911 aa14.97□□□□□ -0.01
HDAC6-229ENST00000486665 SGMS1Q86VZ5 419 aa14.97□□□□□ -0.01
HDAC6-229ENST00000486665 RAB11FIP4Q86YS3 637 aa14.97□□□□□ -0.01
HDAC6-229ENST00000486665 ARMC5Q96C12 935 aa14.97□□□□□ -0.01
HDAC6-229ENST00000486665 CHMP4CQ96CF2 233 aa14.97□□□□□ -0.01
HDAC6-229ENST00000486665 OTUD5Q96G74 571 aa14.97□□□□□ -0.01
HDAC6-229ENST00000486665 TPCN1Q9ULQ1 816 aa14.97□□□□□ -0.01
HDAC6-229ENST00000486665 MYH8P13535 1937 aa14.97□□□□□ -0.01
HDAC6-229ENST00000486665 KLF18A0A0U1RQI7 1052 aa14.96□□□□□ -0.01
HDAC6-229ENST00000486665 CCDC69A6NI79 296 aa14.96□□□□□ -0.01
HDAC6-229ENST00000486665 SPDYE5A6NIY4 337 aa14.96□□□□□ -0.01
HDAC6-229ENST00000486665 ST18O60284 1047 aa14.96□□□□□ -0.01
HDAC6-229ENST00000486665 EVCP57679 992 aa14.96□□□□□ -0.01
HDAC6-229ENST00000486665 PPATQ06203 517 aa14.96□□□□□ -0.01
HDAC6-229ENST00000486665 KIAA1755Q5JYT7 1200 aa14.96□□□□□ -0.01
HDAC6-229ENST00000486665 PPP4R3BQ5MIZ7 849 aa14.96□□□□□ -0.01
HDAC6-229ENST00000486665 OTUD7BQ6GQQ9 843 aa14.96□□□□□ -0.01
HDAC6-229ENST00000486665 ERO1BQ86YB8 467 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 607.5 ms