RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 TPM3P06753 285 aa23.36■■□□□ 1.33
HPS3-206ENST00000486530 NPY5RQ15761 445 aa23.36■■□□□ 1.33
HPS3-206ENST00000486530 CERS5Q8N5B7 392 aa23.36■■□□□ 1.33
HPS3-206ENST00000486530 NEDD1Q8NHV4 660 aa23.36■■□□□ 1.33
HPS3-206ENST00000486530 ERCC4Q92889 916 aaPredicted RBP23.36■■□□□ 1.33
HPS3-206ENST00000486530 TNFRSF25Q93038 417 aa23.36■■□□□ 1.33
HPS3-206ENST00000486530 FAM13BQ9NYF5 915 aa23.36■■□□□ 1.33
HPS3-206ENST00000486530 ZNF219Q9P2Y4 722 aaPredicted RBP23.36■■□□□ 1.33
HPS3-206ENST00000486530 KCNH3Q9ULD8 1083 aa23.36■■□□□ 1.33
HPS3-206ENST00000486530 SRPRBQ9Y5M8 271 aaKnown RBP23.36■■□□□ 1.33
HPS3-206ENST00000486530 BECN2A8MW95 431 aa23.35■■□□□ 1.33
HPS3-206ENST00000486530 G3V3G9 751 aa23.35■■□□□ 1.33
HPS3-206ENST00000486530 DCAF8Q5TAQ9 597 aa23.35■■□□□ 1.33
HPS3-206ENST00000486530 SH3GLB2Q9NR46 395 aa23.35■■□□□ 1.33
HPS3-206ENST00000486530 MAD2L2Q9UI95 211 aa23.35■■□□□ 1.33
HPS3-206ENST00000486530 TTF2Q9UNY4 1162 aaKnown RBP23.35■■□□□ 1.33
HPS3-206ENST00000486530 SARM1Q6SZW1 724 aa23.34■■□□□ 1.33
HPS3-206ENST00000486530 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.34■■□□□ 1.33
HPS3-206ENST00000486530 PLA2G4DQ86XP0 818 aa23.34■■□□□ 1.33
HPS3-206ENST00000486530 ELOA2Q8IYF1 753 aaPredicted RBP23.34■■□□□ 1.33
HPS3-206ENST00000486530 TMEM47Q9BQJ4 181 aa23.34■■□□□ 1.33
HPS3-206ENST00000486530 BPIFA3Q9BQP9 254 aa23.34■■□□□ 1.33
HPS3-206ENST00000486530 STX8Q9UNK0 236 aa23.34■■□□□ 1.33
HPS3-206ENST00000486530 ADAMTSL1Q8N6G6 1762 aa23.34■■□□□ 1.33
HPS3-206ENST00000486530 CALML3P27482 149 aa23.34■■□□□ 1.33
HPS3-206ENST00000486530 DHX40Q8IX18 779 aaKnown RBP23.34■■□□□ 1.33
HPS3-206ENST00000486530 LZTS2Q9BRK4 669 aa23.34■■□□□ 1.33
HPS3-206ENST00000486530 ZNF75DP51815 510 aa23.33■■□□□ 1.33
HPS3-206ENST00000486530 NLRP12P59046 1061 aa23.33■■□□□ 1.33
HPS3-206ENST00000486530 NLRP5P59047 1200 aa23.33■■□□□ 1.33
HPS3-206ENST00000486530 PODNQ7Z5L7 613 aa23.33■■□□□ 1.33
HPS3-206ENST00000486530 TRIM5Q9C035 493 aa23.33■■□□□ 1.33
HPS3-206ENST00000486530 PLIN4Q96Q06 1357 aa23.33■■□□□ 1.33
HPS3-206ENST00000486530 FAM205CA6NFA0 338 aa23.32■■□□□ 1.32
HPS3-206ENST00000486530 F8W031 263 aaPredicted RBP23.32■■□□□ 1.32
HPS3-206ENST00000486530 ATP2B1P20020 1258 aa23.32■■□□□ 1.32
HPS3-206ENST00000486530 EARS2Q5JPH6 523 aaKnown RBP23.32■■□□□ 1.32
HPS3-206ENST00000486530 CC2D2BQ6DHV5 1058 aa23.32■■□□□ 1.32
HPS3-206ENST00000486530 KRBA2Q6ZNG9 492 aa23.32■■□□□ 1.32
HPS3-206ENST00000486530 STAG2Q8N3U4 1231 aa23.32■■□□□ 1.32
HPS3-206ENST00000486530 MXD3Q9BW11 206 aa23.32■■□□□ 1.32
HPS3-206ENST00000486530 TUBE1Q9UJT0 475 aa23.32■■□□□ 1.32
HPS3-206ENST00000486530 ZNF646O15015 1829 aaPredicted RBP23.32■■□□□ 1.32
HPS3-206ENST00000486530 A0A087WWV3 80 aa23.32■■□□□ 1.32
HPS3-206ENST00000486530 HHIPL2Q6UWX4 724 aa23.32■■□□□ 1.32
HPS3-206ENST00000486530 DBNDD1Q9H9R9 158 aa23.32■■□□□ 1.32
HPS3-206ENST00000486530 KCNQ5Q9NR82 932 aa23.32■■□□□ 1.32
HPS3-206ENST00000486530 PALM3A6NDB9 673 aaPredicted RBP23.31■■□□□ 1.32
HPS3-206ENST00000486530 KCNA3P22001 575 aa23.31■■□□□ 1.32
HPS3-206ENST00000486530 TRAPPC10P48553 1259 aa23.31■■□□□ 1.32
HPS3-206ENST00000486530 DPCR1Q3MIW9 517 aa23.31■■□□□ 1.32
HPS3-206ENST00000486530 FAM177A1Q8N128 213 aaPredicted RBP23.31■■□□□ 1.32
HPS3-206ENST00000486530 CNNM3Q8NE01 707 aa23.31■■□□□ 1.32
HPS3-206ENST00000486530 HOOK1Q9UJC3 728 aaKnown RBP23.31■■□□□ 1.32
HPS3-206ENST00000486530 NOVP48745 357 aa23.3■■□□□ 1.32
HPS3-206ENST00000486530 TOP1P11387 765 aaKnown RBP23.3■■□□□ 1.32
HPS3-206ENST00000486530 CDC25BP30305 580 aa23.3■■□□□ 1.32
HPS3-206ENST00000486530 GRIN1Q05586 938 aa23.3■■□□□ 1.32
HPS3-206ENST00000486530 KIAA2012Q0VF49 1180 aa23.3■■□□□ 1.32
HPS3-206ENST00000486530 PICALMQ13492 652 aa23.3■■□□□ 1.32
HPS3-206ENST00000486530 LONRF3Q496Y0 759 aa23.3■■□□□ 1.32
HPS3-206ENST00000486530 TTC38Q5R3I4 469 aa23.3■■□□□ 1.32
HPS3-206ENST00000486530 AOPEPQ8N6M6 819 aa23.3■■□□□ 1.32
HPS3-206ENST00000486530 SPC24Q8NBT2 197 aa23.3■■□□□ 1.32
HPS3-206ENST00000486530 PIBF1Q8WXW3 757 aa23.3■■□□□ 1.32
HPS3-206ENST00000486530 TEKT1Q969V4 418 aa23.3■■□□□ 1.32
HPS3-206ENST00000486530 FERMT2Q96AC1 680 aa23.3■■□□□ 1.32
HPS3-206ENST00000486530 C21orf2O43822 256 aa23.29■■□□□ 1.32
HPS3-206ENST00000486530 FKBP1AP62942 108 aaKnown RBP23.29■■□□□ 1.32
HPS3-206ENST00000486530 GABPAQ06546 454 aa23.29■■□□□ 1.32
HPS3-206ENST00000486530 METTL16Q86W50 562 aaKnown RBP23.29■■□□□ 1.32
HPS3-206ENST00000486530 TTLL6Q8N841 843 aa23.29■■□□□ 1.32
HPS3-206ENST00000486530 CCDC148Q8NFR7 591 aa23.29■■□□□ 1.32
HPS3-206ENST00000486530 DPEP1P16444 411 aa23.28■■□□□ 1.32
HPS3-206ENST00000486530 R3HDM1Q15032 1099 aaKnown RBP23.28■■□□□ 1.32
HPS3-206ENST00000486530 SPECC1Q5M775 1068 aa23.28■■□□□ 1.32
HPS3-206ENST00000486530 CEP95Q96GE4 821 aa23.28■■□□□ 1.32
HPS3-206ENST00000486530 SPZ1Q9BXG8 430 aa23.28■■□□□ 1.32
HPS3-206ENST00000486530 USP40Q9NVE5 1235 aa23.28■■□□□ 1.32
HPS3-206ENST00000486530 MYO3BQ8WXR4 1341 aa23.28■■□□□ 1.32
HPS3-206ENST00000486530 SCN9AQ15858 1988 aa23.28■■□□□ 1.32
HPS3-206ENST00000486530 BIN1O00499 593 aa23.28■■□□□ 1.32
HPS3-206ENST00000486530 PNOCQ13519 176 aa23.28■■□□□ 1.32
HPS3-206ENST00000486530 BLIDQ8IZY5 108 aa23.28■■□□□ 1.32
HPS3-206ENST00000486530 CSRNP2Q9H175 543 aa23.28■■□□□ 1.32
HPS3-206ENST00000486530 TTC12Q9H892 705 aaPredicted RBP23.28■■□□□ 1.32
HPS3-206ENST00000486530 DDX4Q9NQI0 724 aaKnown RBP23.28■■□□□ 1.32
HPS3-206ENST00000486530 PCDHA4Q9UN74 947 aa23.28■■□□□ 1.32
HPS3-206ENST00000486530 ECE2O60344 883 aa23.27■■□□□ 1.32
HPS3-206ENST00000486530 ZBTB7AO95365 584 aa23.27■■□□□ 1.32
HPS3-206ENST00000486530 PARP1P09874 1014 aaKnown RBP23.27■■□□□ 1.32
HPS3-206ENST00000486530 VEGFAP15692 232 aaPredicted RBP23.27■■□□□ 1.32
HPS3-206ENST00000486530 SCNN1DP51172 638 aa23.27■■□□□ 1.32
HPS3-206ENST00000486530 GALNT17Q6IS24 598 aa23.27■■□□□ 1.32
HPS3-206ENST00000486530 MRFAP1L1Q96HT8 127 aa23.27■■□□□ 1.32
HPS3-206ENST00000486530 SWAP70Q9UH65 585 aa23.27■■□□□ 1.32
HPS3-206ENST00000486530 CYTH3O43739 400 aa23.26■■□□□ 1.31
HPS3-206ENST00000486530 AOC3Q16853 763 aa23.26■■□□□ 1.31
HPS3-206ENST00000486530 STRIP1Q5VSL9 837 aa23.26■■□□□ 1.31
HPS3-206ENST00000486530 PIK3AP1Q6ZUJ8 805 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms