RNA–Protein interactions for RNA: ENST00000486446.2

PUDP-204, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 2

Gene PUDP, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-204ENST00000486446 ATP2B3Q16720 1220 aa8.7□□□□□ -1.02
PUDP-204ENST00000486446 ANKRD45Q5TZF3 282 aa8.7□□□□□ -1.02
PUDP-204ENST00000486446 CEP85Q6P2H3 762 aa8.7□□□□□ -1.02
PUDP-204ENST00000486446 ATG9AQ7Z3C6 839 aa8.7□□□□□ -1.02
PUDP-204ENST00000486446 PHTF2Q8N3S3 785 aa8.7□□□□□ -1.02
PUDP-204ENST00000486446 KDF1Q8NAX2 398 aaPredicted RBP8.7□□□□□ -1.02
PUDP-204ENST00000486446 LPIN2Q92539 896 aa8.7□□□□□ -1.02
PUDP-204ENST00000486446 ZBED3Q96IU2 234 aaPredicted RBP8.7□□□□□ -1.02
PUDP-204ENST00000486446 PRMT6Q96LA8 375 aaPredicted RBP8.7□□□□□ -1.02
PUDP-204ENST00000486446 OSBPL3Q9H4L5 887 aa8.7□□□□□ -1.02
PUDP-204ENST00000486446 VEZTQ9HBM0 779 aa8.7□□□□□ -1.02
PUDP-204ENST00000486446 PA2G4Q9UQ80 394 aaKnown RBP8.7□□□□□ -1.02
PUDP-204ENST00000486446 PCDHAC2Q9Y5I4 1007 aa8.7□□□□□ -1.02
PUDP-204ENST00000486446 ARAP2Q8WZ64 1704 aa8.7□□□□□ -1.02
PUDP-204ENST00000486446 PAPPA2Q9BXP8 1791 aa8.7□□□□□ -1.02
PUDP-204ENST00000486446 ECM29Q5VYK3 1845 aa8.69□□□□□ -1.02
PUDP-204ENST00000486446 UBE2Q2LH0YL09 131 aa8.69□□□□□ -1.02
PUDP-204ENST00000486446 FGFR2P21802 821 aa8.69□□□□□ -1.02
PUDP-204ENST00000486446 IL15P40933 162 aaPredicted RBP8.69□□□□□ -1.02
PUDP-204ENST00000486446 ERVK-9P63128 1117 aa8.69□□□□□ -1.02
PUDP-204ENST00000486446 FKBP1BP68106 108 aa8.69□□□□□ -1.02
PUDP-204ENST00000486446 PRKG1Q13976 671 aa8.69□□□□□ -1.02
PUDP-204ENST00000486446 MOB2Q70IA6 237 aa8.69□□□□□ -1.02
PUDP-204ENST00000486446 TBC1D22AQ8WUA7 517 aa8.69□□□□□ -1.02
PUDP-204ENST00000486446 SNX21Q969T3 373 aa8.69□□□□□ -1.02
PUDP-204ENST00000486446 AGBL1Q96MI9 1066 aa8.69□□□□□ -1.02
PUDP-204ENST00000486446 COPRSQ9NQ92 184 aa8.69□□□□□ -1.02
PUDP-204ENST00000486446 COL1A1P02452 1464 aaPredicted RBP8.69□□□□□ -1.02
PUDP-204ENST00000486446 MYH13Q9UKX3 1938 aa8.68□□□□□ -1.02
PUDP-204ENST00000486446 FAM155AB1AL88 458 aaPredicted RBP8.68□□□□□ -1.02
PUDP-204ENST00000486446 CA12O43570 354 aa8.68□□□□□ -1.02
PUDP-204ENST00000486446 ADH1AP07327 375 aa8.68□□□□□ -1.02
PUDP-204ENST00000486446 CRKP46108 304 aa8.68□□□□□ -1.02
PUDP-204ENST00000486446 KIF23Q02241 960 aaPredicted RBP8.68□□□□□ -1.02
PUDP-204ENST00000486446 GRIK5Q16478 980 aa8.68□□□□□ -1.02
PUDP-204ENST00000486446 ARMC9Q7Z3E5 817 aa8.68□□□□□ -1.02
PUDP-204ENST00000486446 PLEKHM2Q8IWE5 1019 aa8.68□□□□□ -1.02
PUDP-204ENST00000486446 C22orf23Q9BZE7 217 aa8.68□□□□□ -1.02
PUDP-204ENST00000486446 DEFB129Q9H1M3 183 aa8.68□□□□□ -1.02
PUDP-204ENST00000486446 TDRD3Q9H7E2 651 aaKnown RBP8.68□□□□□ -1.02
PUDP-204ENST00000486446 CYLDQ9NQC7 956 aa8.68□□□□□ -1.02
PUDP-204ENST00000486446 GNL3LQ9NVN8 582 aaKnown RBP8.68□□□□□ -1.02
PUDP-204ENST00000486446 SERPINA10Q9UK55 444 aa8.68□□□□□ -1.02
PUDP-204ENST00000486446 MAST3O60307 1309 aa8.67□□□□□ -1.02
PUDP-204ENST00000486446 DDIT3P35638 169 aa8.67□□□□□ -1.02
PUDP-204ENST00000486446 SOX11P35716 441 aa8.67□□□□□ -1.02
PUDP-204ENST00000486446 AOX1Q06278 1338 aa8.67□□□□□ -1.02
PUDP-204ENST00000486446 MTX1Q13505 466 aa8.67□□□□□ -1.02
PUDP-204ENST00000486446 LCE2AQ5TA79 106 aaPredicted RBP8.67□□□□□ -1.02
PUDP-204ENST00000486446 RASAL3Q86YV0 1011 aa8.67□□□□□ -1.02
PUDP-204ENST00000486446 WDR66Q8TBY9 1149 aa8.67□□□□□ -1.02
PUDP-204ENST00000486446 TEKT1Q969V4 418 aa8.67□□□□□ -1.02
PUDP-204ENST00000486446 ZIC5Q96T25 663 aa8.67□□□□□ -1.02
PUDP-204ENST00000486446 LNPKQ9C0E8 428 aa8.67□□□□□ -1.02
PUDP-204ENST00000486446 ZNF70Q9UC06 446 aaPredicted RBP8.67□□□□□ -1.02
PUDP-204ENST00000486446 CASP8AP2Q9UKL3 1982 aa8.67□□□□□ -1.02
PUDP-204ENST00000486446 ANGEL1Q9UNK9 670 aaKnown RBP8.67□□□□□ -1.02
PUDP-204ENST00000486446 AKAP2Q9Y2D5 859 aa8.67□□□□□ -1.02
PUDP-204ENST00000486446 PPP2R3BQ9Y5P8 575 aa8.67□□□□□ -1.02
PUDP-204ENST00000486446 PNMA6EA0A0J9YXQ4 647 aa8.66□□□□□ -1.02
PUDP-204ENST00000486446 A0A1B0GUL7 405 aa8.66□□□□□ -1.02
PUDP-204ENST00000486446 TCP10L2B9ZVM9 353 aa8.66□□□□□ -1.02
PUDP-204ENST00000486446 EPB41L2O43491 1005 aaKnown RBP8.66□□□□□ -1.02
PUDP-204ENST00000486446 RAD21O60216 631 aa8.66□□□□□ -1.02
PUDP-204ENST00000486446 RAB11FIP3O75154 756 aa8.66□□□□□ -1.02
PUDP-204ENST00000486446 ADORA1P30542 326 aa8.66□□□□□ -1.02
PUDP-204ENST00000486446 PTGIRP43119 386 aa8.66□□□□□ -1.02
PUDP-204ENST00000486446 PHKA1P46020 1223 aa8.66□□□□□ -1.02
PUDP-204ENST00000486446 TNNI2P48788 182 aa8.66□□□□□ -1.02
PUDP-204ENST00000486446 TIMM10P62072 90 aa8.66□□□□□ -1.02
PUDP-204ENST00000486446 HDLBPQ00341 1268 aaKnown RBP8.66□□□□□ -1.02
PUDP-204ENST00000486446 TFCP2Q12800 502 aa8.66□□□□□ -1.02
PUDP-204ENST00000486446 G3BP1Q13283 466 aaKnown RBP eCLIP8.66□□□□□ -1.02
PUDP-204ENST00000486446 TNFAIP1Q13829 316 aa8.66□□□□□ -1.02
PUDP-204ENST00000486446 RASA3Q14644 834 aa8.66□□□□□ -1.02
PUDP-204ENST00000486446 SUPT20HL1Q3ZLR7 823 aa8.66□□□□□ -1.02
PUDP-204ENST00000486446 SSH3Q8TE77 659 aa8.66□□□□□ -1.02
PUDP-204ENST00000486446 NEUROD6Q96NK8 337 aa8.66□□□□□ -1.02
PUDP-204ENST00000486446 C1orf115Q9H7X2 142 aa8.66□□□□□ -1.02
PUDP-204ENST00000486446 TMOD2Q9NZR1 351 aa8.66□□□□□ -1.02
PUDP-204ENST00000486446 DENND2AQ9ULE3 1009 aa8.66□□□□□ -1.02
PUDP-204ENST00000486446 FZD1Q9UP38 647 aa8.66□□□□□ -1.02
PUDP-204ENST00000486446 PCDHB11Q9Y5F2 797 aa8.66□□□□□ -1.02
PUDP-204ENST00000486446 SOBPA7XYQ1 873 aa8.65□□□□□ -1.02
PUDP-204ENST00000486446 PPP1R12BO60237 982 aaPredicted RBP8.65□□□□□ -1.02
PUDP-204ENST00000486446 PDIA4P13667 645 aaKnown RBP8.65□□□□□ -1.02
PUDP-204ENST00000486446 SCTRP47872 440 aa8.65□□□□□ -1.02
PUDP-204ENST00000486446 RELBQ01201 579 aa8.65□□□□□ -1.02
PUDP-204ENST00000486446 NFX1Q12986 1120 aaKnown RBP8.65□□□□□ -1.02
PUDP-204ENST00000486446 OS9Q13438 667 aaPredicted RBP8.65□□□□□ -1.02
PUDP-204ENST00000486446 HSP90AB4PQ58FF6 505 aa8.65□□□□□ -1.02
PUDP-204ENST00000486446 GORABQ5T7V8 394 aa8.65□□□□□ -1.02
PUDP-204ENST00000486446 NBPF12Q5TAG4 269 aaPredicted RBP8.65□□□□□ -1.02
PUDP-204ENST00000486446 CCDC102BQ68D86 513 aa8.65□□□□□ -1.02
PUDP-204ENST00000486446 TREML4Q6UXN2 200 aa8.65□□□□□ -1.02
PUDP-204ENST00000486446 STAP2Q9UGK3 403 aa8.65□□□□□ -1.02
PUDP-204ENST00000486446 DNMT3LQ9UJW3 386 aa8.65□□□□□ -1.02
PUDP-204ENST00000486446 SUGT1Q9Y2Z0 365 aa8.65□□□□□ -1.02
PUDP-204ENST00000486446 TTLL8A6PVC2 850 aa8.64□□□□□ -1.03
PUDP-204ENST00000486446 TERTO14746 1132 aaKnown RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms