RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 TMEM87AQ8NBN3 555 aa16.99■□□□□ 0.31
POLR2J3-204ENST00000486319 ZSCAN16Q9H4T2 348 aaPredicted RBP16.99■□□□□ 0.31
POLR2J3-204ENST00000486319 SENP2Q9HC62 589 aa16.99■□□□□ 0.31
POLR2J3-204ENST00000486319 MYH8P13535 1937 aa16.98■□□□□ 0.31
POLR2J3-204ENST00000486319 SMIM22K7EJ46 135 aa16.98■□□□□ 0.31
POLR2J3-204ENST00000486319 POLR3DP05423 398 aaPredicted RBP16.98■□□□□ 0.31
POLR2J3-204ENST00000486319 CYP2D6P10635 497 aa16.98■□□□□ 0.31
POLR2J3-204ENST00000486319 PPP2R5BQ15173 497 aa16.98■□□□□ 0.31
POLR2J3-204ENST00000486319 FOXD4L6Q3SYB3 417 aaPredicted RBP16.98■□□□□ 0.31
POLR2J3-204ENST00000486319 FOXD4L3Q6VB84 417 aaPredicted RBP16.98■□□□□ 0.31
POLR2J3-204ENST00000486319 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.98■□□□□ 0.31
POLR2J3-204ENST00000486319 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.98■□□□□ 0.31
POLR2J3-204ENST00000486319 WRNIP1Q96S55 665 aa16.98■□□□□ 0.31
POLR2J3-204ENST00000486319 ZNF287Q9HBT7 754 aa16.98■□□□□ 0.31
POLR2J3-204ENST00000486319 DDX4Q9NQI0 724 aaKnown RBP16.98■□□□□ 0.31
POLR2J3-204ENST00000486319 ORC3Q9UBD5 711 aaPredicted RBP16.98■□□□□ 0.31
POLR2J3-204ENST00000486319 CSADQ9Y600 493 aa16.98■□□□□ 0.31
POLR2J3-204ENST00000486319 CCDC196A0A1B0GTZ2 297 aa16.97■□□□□ 0.31
POLR2J3-204ENST00000486319 PRDM1O75626 825 aa16.97■□□□□ 0.31
POLR2J3-204ENST00000486319 MBD3O95983 291 aa16.97■□□□□ 0.31
POLR2J3-204ENST00000486319 FDPSP14324 419 aaKnown RBP16.97■□□□□ 0.31
POLR2J3-204ENST00000486319 NCLP19338 710 aaKnown RBP16.97■□□□□ 0.31
POLR2J3-204ENST00000486319 LBX1P52954 281 aa16.97■□□□□ 0.31
POLR2J3-204ENST00000486319 RAB11FIP4Q86YS3 637 aa16.97■□□□□ 0.31
POLR2J3-204ENST00000486319 MAPKAPK5Q8IW41 473 aa16.97■□□□□ 0.31
POLR2J3-204ENST00000486319 CHAMP1Q96JM3 812 aa16.97■□□□□ 0.31
POLR2J3-204ENST00000486319 ZNF341Q9BYN7 854 aa16.97■□□□□ 0.31
POLR2J3-204ENST00000486319 ELP3Q9H9T3 547 aa16.97■□□□□ 0.31
POLR2J3-204ENST00000486319 THSD7BQ9C0I4 1608 aa16.97■□□□□ 0.31
POLR2J3-204ENST00000486319 FLT1P17948 1338 aa16.97■□□□□ 0.31
POLR2J3-204ENST00000486319 NPM3O75607 178 aaKnown RBP16.96■□□□□ 0.31
POLR2J3-204ENST00000486319 ZBTB48P10074 688 aaPredicted RBP16.96■□□□□ 0.31
POLR2J3-204ENST00000486319 HSPA8P11142 646 aaKnown RBP16.96■□□□□ 0.31
POLR2J3-204ENST00000486319 ADD1P35611 737 aaKnown RBP16.96■□□□□ 0.31
POLR2J3-204ENST00000486319 VGLL4Q14135 290 aa16.96■□□□□ 0.31
POLR2J3-204ENST00000486319 IFIT1BQ5T764 474 aaKnown RBP16.96■□□□□ 0.31
POLR2J3-204ENST00000486319 ZNF654Q8IZM8 581 aa16.96■□□□□ 0.31
POLR2J3-204ENST00000486319 WNK4Q96J92 1243 aa16.96■□□□□ 0.31
POLR2J3-204ENST00000486319 TSKSQ9UJT2 592 aa16.96■□□□□ 0.31
POLR2J3-204ENST00000486319 CNPY2Q9Y2B0 182 aa16.96■□□□□ 0.31
POLR2J3-204ENST00000486319 DDTLA6NHG4 134 aaPredicted RBP16.96■□□□□ 0.3
POLR2J3-204ENST00000486319 TSPY2A6NKD2 308 aa16.96■□□□□ 0.3
POLR2J3-204ENST00000486319 CALM1P0DP23 149 aa16.96■□□□□ 0.3
POLR2J3-204ENST00000486319 CALM2P0DP24 149 aa16.96■□□□□ 0.3
POLR2J3-204ENST00000486319 CALM3P0DP25 149 aa16.96■□□□□ 0.3
POLR2J3-204ENST00000486319 RXRAP19793 462 aa16.96■□□□□ 0.3
POLR2J3-204ENST00000486319 CDC27P30260 824 aa16.96■□□□□ 0.3
POLR2J3-204ENST00000486319 KRT85P78386 507 aa16.96■□□□□ 0.3
POLR2J3-204ENST00000486319 DNM1Q05193 864 aaKnown RBP16.96■□□□□ 0.3
POLR2J3-204ENST00000486319 SREBF2Q12772 1141 aa16.96■□□□□ 0.3
POLR2J3-204ENST00000486319 RTN1Q16799 776 aa16.96■□□□□ 0.3
POLR2J3-204ENST00000486319 CCDC178Q5BJE1 867 aa16.96■□□□□ 0.3
POLR2J3-204ENST00000486319 COL13A1Q5TAT6 717 aaPredicted RBP16.96■□□□□ 0.3
POLR2J3-204ENST00000486319 SH3BP5LQ7L8J4 393 aa16.96■□□□□ 0.3
POLR2J3-204ENST00000486319 FERMT3Q86UX7 667 aa16.96■□□□□ 0.3
POLR2J3-204ENST00000486319 ENAHQ8N8S7 591 aaPredicted RBP16.96■□□□□ 0.3
POLR2J3-204ENST00000486319 OPTNQ96CV9 577 aa16.96■□□□□ 0.3
POLR2J3-204ENST00000486319 MKNK2Q9HBH9 465 aa16.96■□□□□ 0.3
POLR2J3-204ENST00000486319 STK36Q9NRP7 1315 aa16.95■□□□□ 0.3
POLR2J3-204ENST00000486319 TRPA1O75762 1119 aa16.95■□□□□ 0.3
POLR2J3-204ENST00000486319 TM4SF4P48230 202 aa16.95■□□□□ 0.3
POLR2J3-204ENST00000486319 RESTQ13127 1097 aa16.95■□□□□ 0.3
POLR2J3-204ENST00000486319 CATIPQ7Z7H3 387 aa16.95■□□□□ 0.3
POLR2J3-204ENST00000486319 ZKSCAN4Q969J2 545 aaPredicted RBP16.95■□□□□ 0.3
POLR2J3-204ENST00000486319 C8orf76Q96K31 380 aa16.95■□□□□ 0.3
POLR2J3-204ENST00000486319 PRDM10Q9NQV6 1147 aa16.95■□□□□ 0.3
POLR2J3-204ENST00000486319 RNF186Q9NXI6 227 aa16.95■□□□□ 0.3
POLR2J3-204ENST00000486319 MANSC4A6NHS7 340 aaPredicted RBP16.94■□□□□ 0.3
POLR2J3-204ENST00000486319 IFNAR1P17181 557 aa16.94■□□□□ 0.3
POLR2J3-204ENST00000486319 INHBEP58166 350 aa16.94■□□□□ 0.3
POLR2J3-204ENST00000486319 EVX2Q03828 476 aa16.94■□□□□ 0.3
POLR2J3-204ENST00000486319 NTRK3Q16288 839 aa16.94■□□□□ 0.3
POLR2J3-204ENST00000486319 CCDC144CPQ8IYA2 1237 aa16.94■□□□□ 0.3
POLR2J3-204ENST00000486319 ZNF444Q8N0Y2 327 aaPredicted RBP16.94■□□□□ 0.3
POLR2J3-204ENST00000486319 FANCBQ8NB91 859 aa16.94■□□□□ 0.3
POLR2J3-204ENST00000486319 MYL10Q9BUA6 226 aa16.94■□□□□ 0.3
POLR2J3-204ENST00000486319 OSBPL5Q9H0X9 879 aaPredicted RBP16.94■□□□□ 0.3
POLR2J3-204ENST00000486319 FAM217BQ9NTX9 383 aaPredicted RBP16.94■□□□□ 0.3
POLR2J3-204ENST00000486319 SAGE1Q9NXZ1 904 aa16.94■□□□□ 0.3
POLR2J3-204ENST00000486319 SAP30BPQ9UHR5 308 aaKnown RBP16.94■□□□□ 0.3
POLR2J3-204ENST00000486319 DDAH1O94760 285 aa16.93■□□□□ 0.3
POLR2J3-204ENST00000486319 DEKP35659 375 aaKnown RBP16.93■□□□□ 0.3
POLR2J3-204ENST00000486319 GJA5P36382 358 aa16.93■□□□□ 0.3
POLR2J3-204ENST00000486319 PLCD1P51178 756 aa16.93■□□□□ 0.3
POLR2J3-204ENST00000486319 SSRP1Q08945 709 aaKnown RBP16.93■□□□□ 0.3
POLR2J3-204ENST00000486319 FAM47AQ5JRC9 791 aa16.93■□□□□ 0.3
POLR2J3-204ENST00000486319 TTC6Q86TZ1 520 aa16.93■□□□□ 0.3
POLR2J3-204ENST00000486319 WASF1Q92558 559 aa16.93■□□□□ 0.3
POLR2J3-204ENST00000486319 SCAND2PQ9GZW5 306 aaPredicted RBP16.93■□□□□ 0.3
POLR2J3-204ENST00000486319 GZF1Q9H116 711 aaPredicted RBP16.93■□□□□ 0.3
POLR2J3-204ENST00000486319 GDPD2Q9HCC8 539 aa16.93■□□□□ 0.3
POLR2J3-204ENST00000486319 RBM28Q9NW13 759 aaKnown RBP16.93■□□□□ 0.3
POLR2J3-204ENST00000486319 ZNF112Q9UJU3 913 aa16.93■□□□□ 0.3
POLR2J3-204ENST00000486319 FIBPO43427 364 aa16.92■□□□□ 0.3
POLR2J3-204ENST00000486319 INPP5BP32019 993 aa16.92■□□□□ 0.3
POLR2J3-204ENST00000486319 TFAP4Q01664 338 aa16.92■□□□□ 0.3
POLR2J3-204ENST00000486319 SLC4A8Q2Y0W8 1093 aa16.92■□□□□ 0.3
POLR2J3-204ENST00000486319 C16orf86Q6ZW13 317 aa16.92■□□□□ 0.3
POLR2J3-204ENST00000486319 DGKHQ86XP1 1220 aa16.92■□□□□ 0.3
POLR2J3-204ENST00000486319 TRIM22Q8IYM9 498 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms