RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 METTL24Q5JXM2 366 aa10.39□□□□□ -0.75
XRN1-212ENST00000486211 RASIP1Q5U651 963 aa10.39□□□□□ -0.75
XRN1-212ENST00000486211 ARRDC4Q8NCT1 418 aa10.39□□□□□ -0.75
XRN1-212ENST00000486211 KIAA1468Q9P260 1216 aa10.39□□□□□ -0.75
XRN1-212ENST00000486211 MYO9BQ13459 2157 aa10.38□□□□□ -0.75
XRN1-212ENST00000486211 USP17L5A8MUK1 530 aa10.38□□□□□ -0.75
XRN1-212ENST00000486211 KBTBD13C9JR72 458 aa10.38□□□□□ -0.75
XRN1-212ENST00000486211 F6X3S4 739 aa10.38□□□□□ -0.75
XRN1-212ENST00000486211 CLTBP09497 229 aa10.38□□□□□ -0.75
XRN1-212ENST00000486211 IGFBP4P22692 258 aa10.38□□□□□ -0.75
XRN1-212ENST00000486211 CYP2C19P33261 490 aa10.38□□□□□ -0.75
XRN1-212ENST00000486211 CAP2P40123 477 aa10.38□□□□□ -0.75
XRN1-212ENST00000486211 ADCYAP1R1P41586 468 aa10.38□□□□□ -0.75
XRN1-212ENST00000486211 MTMR2Q13614 643 aa10.38□□□□□ -0.75
XRN1-212ENST00000486211 C6orf132Q5T0Z8 1188 aa10.38□□□□□ -0.75
XRN1-212ENST00000486211 LAPTM4BQ86VI4 370 aa10.38□□□□□ -0.75
XRN1-212ENST00000486211 NPLOC4Q8TAT6 608 aa10.38□□□□□ -0.75
XRN1-212ENST00000486211 TSR2Q969E8 191 aaKnown RBP10.38□□□□□ -0.75
XRN1-212ENST00000486211 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.38□□□□□ -0.75
XRN1-212ENST00000486211 MYBBP1AQ9BQG0 1328 aaKnown RBP10.37□□□□□ -0.75
XRN1-212ENST00000486211 SALL1Q9NSC2 1324 aa10.37□□□□□ -0.75
XRN1-212ENST00000486211 CHD7Q9P2D1 2997 aa10.37□□□□□ -0.75
XRN1-212ENST00000486211 CNMDO75829 334 aa10.37□□□□□ -0.75
XRN1-212ENST00000486211 LDHBP07195 334 aaKnown RBP10.37□□□□□ -0.75
XRN1-212ENST00000486211 RAG1P15918 1043 aa10.37□□□□□ -0.75
XRN1-212ENST00000486211 BACE1P56817 501 aa10.37□□□□□ -0.75
XRN1-212ENST00000486211 LRRC41Q15345 812 aa10.37□□□□□ -0.75
XRN1-212ENST00000486211 TWISTNBQ3B726 338 aaPredicted RBP10.37□□□□□ -0.75
XRN1-212ENST00000486211 ANO1Q5XXA6 986 aa10.37□□□□□ -0.75
XRN1-212ENST00000486211 C16orf59Q7L2K0 433 aa10.37□□□□□ -0.75
XRN1-212ENST00000486211 FERMT2Q96AC1 680 aa10.37□□□□□ -0.75
XRN1-212ENST00000486211 SUCLG2Q96I99 432 aa10.37□□□□□ -0.75
XRN1-212ENST00000486211 WDR18Q9BV38 432 aa10.37□□□□□ -0.75
XRN1-212ENST00000486211 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.37□□□□□ -0.75
XRN1-212ENST00000486211 NDUFB9Q9Y6M9 179 aa10.37□□□□□ -0.75
XRN1-212ENST00000486211 MYH2Q9UKX2 1941 aa10.37□□□□□ -0.75
XRN1-212ENST00000486211 LRRC37A2A6NM11 1700 aa10.36□□□□□ -0.75
XRN1-212ENST00000486211 SLC15A5A6NIM6 579 aa10.36□□□□□ -0.75
XRN1-212ENST00000486211 APAF1O14727 1248 aa10.36□□□□□ -0.75
XRN1-212ENST00000486211 ERC2O15083 957 aa10.36□□□□□ -0.75
XRN1-212ENST00000486211 ZEB1P37275 1124 aaPredicted RBP10.36□□□□□ -0.75
XRN1-212ENST00000486211 ATP2B2Q01814 1243 aa10.36□□□□□ -0.75
XRN1-212ENST00000486211 PICALMQ13492 652 aa10.36□□□□□ -0.75
XRN1-212ENST00000486211 GRB14Q14449 540 aa10.36□□□□□ -0.75
XRN1-212ENST00000486211 PUM3Q15397 648 aaKnown RBP10.36□□□□□ -0.75
XRN1-212ENST00000486211 AAK1Q2M2I8 961 aa10.36□□□□□ -0.75
XRN1-212ENST00000486211 CCAR1Q8IX12 1150 aaKnown RBP10.36□□□□□ -0.75
XRN1-212ENST00000486211 GTF3C2Q8WUA4 911 aaPredicted RBP10.36□□□□□ -0.75
XRN1-212ENST00000486211 PAGR1Q9BTK6 254 aa10.36□□□□□ -0.75
XRN1-212ENST00000486211 CACNA1AO00555 2505 aa10.36□□□□□ -0.75
XRN1-212ENST00000486211 PI4K2BG5E9Z4 385 aa10.35□□□□□ -0.75
XRN1-212ENST00000486211 SMIM22K7EJ46 135 aa10.35□□□□□ -0.75
XRN1-212ENST00000486211 SEPT4O43236 478 aa10.35□□□□□ -0.75
XRN1-212ENST00000486211 TLL1O43897 1013 aa10.35□□□□□ -0.75
XRN1-212ENST00000486211 IFIT1P09914 478 aaKnown RBP10.35□□□□□ -0.75
XRN1-212ENST00000486211 RHBDL3P58872 404 aa10.35□□□□□ -0.75
XRN1-212ENST00000486211 JAG1P78504 1218 aa10.35□□□□□ -0.75
XRN1-212ENST00000486211 NHLH1Q02575 133 aa10.35□□□□□ -0.75
XRN1-212ENST00000486211 WDR43Q15061 677 aaKnown RBP eCLIP10.35□□□□□ -0.75
XRN1-212ENST00000486211 RALBP1Q15311 655 aa10.35□□□□□ -0.75
XRN1-212ENST00000486211 E2F4Q16254 413 aa10.35□□□□□ -0.75
XRN1-212ENST00000486211 RABL6Q3YEC7 729 aaPredicted RBP10.35□□□□□ -0.75
XRN1-212ENST00000486211 TMEM240Q5SV17 173 aa10.35□□□□□ -0.75
XRN1-212ENST00000486211 AS3MTQ9HBK9 375 aa10.35□□□□□ -0.75
XRN1-212ENST00000486211 TMOD4Q9NZQ9 345 aa10.35□□□□□ -0.75
XRN1-212ENST00000486211 PHF24Q9UPV7 400 aa10.35□□□□□ -0.75
XRN1-212ENST00000486211 SOWAHBA6NEL2 793 aa10.34□□□□□ -0.75
XRN1-212ENST00000486211 FAAP100Q0VG06 881 aa10.34□□□□□ -0.75
XRN1-212ENST00000486211 FAM47AQ5JRC9 791 aa10.34□□□□□ -0.75
XRN1-212ENST00000486211 CCDC129Q6ZRS4 1044 aa10.34□□□□□ -0.75
XRN1-212ENST00000486211 ANKRD44Q8N8A2 993 aa10.34□□□□□ -0.75
XRN1-212ENST00000486211 CCER1Q8TC90 406 aaPredicted RBP10.34□□□□□ -0.75
XRN1-212ENST00000486211 ZFRQ96KR1 1074 aaKnown RBP10.34□□□□□ -0.75
XRN1-212ENST00000486211 NKX2-4Q9H2Z4 354 aa10.34□□□□□ -0.75
XRN1-212ENST00000486211 TMEM39AQ9NV64 488 aa10.34□□□□□ -0.75
XRN1-212ENST00000486211 YBX2Q9Y2T7 364 aaKnown RBP10.34□□□□□ -0.75
XRN1-212ENST00000486211 RABGAP1Q9Y3P9 1069 aa10.34□□□□□ -0.75
XRN1-212ENST00000486211 CACNA1FO60840 1977 aa10.34□□□□□ -0.75
XRN1-212ENST00000486211 SIPA1L1O43166 1804 aa10.33□□□□□ -0.76
XRN1-212ENST00000486211 ZNF236Q9UL36 1845 aa10.33□□□□□ -0.76
XRN1-212ENST00000486211 PRR33A8MZF0 331 aa10.33□□□□□ -0.76
XRN1-212ENST00000486211 C19orf81C9J6K1 198 aa10.33□□□□□ -0.76
XRN1-212ENST00000486211 PQBP1O60828 265 aaKnown RBP10.33□□□□□ -0.76
XRN1-212ENST00000486211 GLRX3O76003 335 aaKnown RBP10.33□□□□□ -0.76
XRN1-212ENST00000486211 BTDP43251 543 aa10.33□□□□□ -0.76
XRN1-212ENST00000486211 SHROOM1Q2M3G4 852 aaPredicted RBP10.33□□□□□ -0.76
XRN1-212ENST00000486211 OLFML2BQ68BL8 750 aa10.33□□□□□ -0.76
XRN1-212ENST00000486211 ANKRD33Q7Z3H0 272 aa10.33□□□□□ -0.76
XRN1-212ENST00000486211 KLHDC4Q8TBB5 520 aa10.33□□□□□ -0.76
XRN1-212ENST00000486211 HERVK_113Q902F9 699 aa10.33□□□□□ -0.76
XRN1-212ENST00000486211 DDX12PQ92771 950 aa10.33□□□□□ -0.76
XRN1-212ENST00000486211 BICC1Q9H694 974 aaKnown RBP10.33□□□□□ -0.76
XRN1-212ENST00000486211 CD320Q9NPF0 282 aa10.33□□□□□ -0.76
XRN1-212ENST00000486211 C9orf78Q9NZ63 289 aaPredicted RBP10.33□□□□□ -0.76
XRN1-212ENST00000486211 TBX21Q9UL17 535 aa10.33□□□□□ -0.76
XRN1-212ENST00000486211 GBF1Q92538 1859 aa10.33□□□□□ -0.76
XRN1-212ENST00000486211 ALDH1L1O75891 902 aa10.32□□□□□ -0.76
XRN1-212ENST00000486211 TIMP1P01033 207 aa10.32□□□□□ -0.76
XRN1-212ENST00000486211 NBPF7P0C2Y1 421 aaPredicted RBP10.32□□□□□ -0.76
XRN1-212ENST00000486211 SLC5A1P13866 664 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms