RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 B2RBV5 119 aa9.16□□□□□ -0.94
RTN4-214ENST00000486085 C9IYK1 514 aa9.16□□□□□ -0.94
RTN4-214ENST00000486085 SLC7A5Q01650 507 aa9.16□□□□□ -0.94
RTN4-214ENST00000486085 ARHGAP27Q6ZUM4 889 aa9.16□□□□□ -0.94
RTN4-214ENST00000486085 DPH6Q7L8W6 267 aa9.16□□□□□ -0.94
RTN4-214ENST00000486085 PPFIBP1Q86W92 1011 aa9.16□□□□□ -0.94
RTN4-214ENST00000486085 ZDHHC13Q8IUH4 622 aa9.16□□□□□ -0.94
RTN4-214ENST00000486085 VWCEQ96DN2 955 aa9.16□□□□□ -0.94
RTN4-214ENST00000486085 MKRN2Q9H000 416 aaKnown RBP9.16□□□□□ -0.94
RTN4-214ENST00000486085 MAPK8IP1Q9UQF2 711 aa9.16□□□□□ -0.94
RTN4-214ENST00000486085 LEMD3Q9Y2U8 911 aa9.16□□□□□ -0.94
RTN4-214ENST00000486085 PRR33A8MZF0 331 aa9.15□□□□□ -0.94
RTN4-214ENST00000486085 IGF2BP3O00425 579 aaKnown RBP eCLIP9.15□□□□□ -0.94
RTN4-214ENST00000486085 RNF4P78317 190 aa9.15□□□□□ -0.94
RTN4-214ENST00000486085 DDR2Q16832 855 aa9.15□□□□□ -0.94
RTN4-214ENST00000486085 BBS9Q3SYG4 887 aa9.15□□□□□ -0.94
RTN4-214ENST00000486085 PRSS36Q5K4E3 855 aa9.15□□□□□ -0.94
RTN4-214ENST00000486085 KIAA1211LQ6NV74 962 aa9.15□□□□□ -0.94
RTN4-214ENST00000486085 SLC51AQ86UW1 340 aa9.15□□□□□ -0.94
RTN4-214ENST00000486085 FAM178BQ8IXR5 827 aa9.15□□□□□ -0.94
RTN4-214ENST00000486085 CCDC144CPQ8IYA2 1237 aa9.15□□□□□ -0.94
RTN4-214ENST00000486085 FAM181AQ8N9Y4 354 aa9.15□□□□□ -0.94
RTN4-214ENST00000486085 FBXL18Q96ME1 805 aa9.15□□□□□ -0.94
RTN4-214ENST00000486085 ASPNQ9BXN1 380 aa9.15□□□□□ -0.94
RTN4-214ENST00000486085 SIRPGQ9P1W8 387 aa9.15□□□□□ -0.94
RTN4-214ENST00000486085 CCDC85CA6NKD9 419 aa9.14□□□□□ -0.95
RTN4-214ENST00000486085 GNAT3A8MTJ3 354 aa9.14□□□□□ -0.95
RTN4-214ENST00000486085 GJB6O95452 261 aa9.14□□□□□ -0.95
RTN4-214ENST00000486085 CCDC144BQ3MJ40 725 aa9.14□□□□□ -0.95
RTN4-214ENST00000486085 KLHL6Q8WZ60 621 aa9.14□□□□□ -0.95
RTN4-214ENST00000486085 U3KQE9 123 aa9.14□□□□□ -0.95
RTN4-214ENST00000486085 PRR19A6NJB7 356 aa9.13□□□□□ -0.95
RTN4-214ENST00000486085 CYP26A1O43174 497 aa9.13□□□□□ -0.95
RTN4-214ENST00000486085 ITIH2P19823 946 aa9.13□□□□□ -0.95
RTN4-214ENST00000486085 OXCT1P55809 520 aa9.13□□□□□ -0.95
RTN4-214ENST00000486085 SERINC3Q13530 473 aa9.13□□□□□ -0.95
RTN4-214ENST00000486085 AXDND1Q5T1B0 1012 aaPredicted RBP9.13□□□□□ -0.95
RTN4-214ENST00000486085 COX4I2Q96KJ9 171 aa9.13□□□□□ -0.95
RTN4-214ENST00000486085 Q96M66 194 aa9.13□□□□□ -0.95
RTN4-214ENST00000486085 OSBPL2Q9H1P3 480 aa9.13□□□□□ -0.95
RTN4-214ENST00000486085 PIM2Q9P1W9 311 aa9.13□□□□□ -0.95
RTN4-214ENST00000486085 KIR3DL1P43629 444 aa9.12□□□□□ -0.95
RTN4-214ENST00000486085 NCAPHQ15003 741 aa9.12□□□□□ -0.95
RTN4-214ENST00000486085 CPSF6Q16630 551 aaKnown RBP eCLIP9.12□□□□□ -0.95
RTN4-214ENST00000486085 DCAF15Q66K64 600 aa9.12□□□□□ -0.95
RTN4-214ENST00000486085 SMARCC1Q92922 1105 aaPredicted RBP9.12□□□□□ -0.95
RTN4-214ENST00000486085 ZSWIM4Q9H7M6 989 aa9.12□□□□□ -0.95
RTN4-214ENST00000486085 FBXL21Q9UKT6 434 aa9.12□□□□□ -0.95
RTN4-214ENST00000486085 KCNH3Q9ULD8 1083 aa9.12□□□□□ -0.95
RTN4-214ENST00000486085 MYO15BQ96JP2 1530 aa9.11□□□□□ -0.95
RTN4-214ENST00000486085 FAM155AB1AL88 458 aaPredicted RBP9.11□□□□□ -0.95
RTN4-214ENST00000486085 TGFB1P01137 390 aa9.11□□□□□ -0.95
RTN4-214ENST00000486085 TNK2Q07912 1038 aa9.11□□□□□ -0.95
RTN4-214ENST00000486085 AUHQ13825 339 aaKnown RBP9.11□□□□□ -0.95
RTN4-214ENST00000486085 BMS1Q14692 1282 aaKnown RBP9.11□□□□□ -0.95
RTN4-214ENST00000486085 NBPF9Q3BBW0 867 aa9.11□□□□□ -0.95
RTN4-214ENST00000486085 MFSD4AQ8N468 514 aa9.11□□□□□ -0.95
RTN4-214ENST00000486085 DTWD2Q8NBA8 298 aa9.11□□□□□ -0.95
RTN4-214ENST00000486085 CAPN6Q9Y6Q1 641 aa9.11□□□□□ -0.95
RTN4-214ENST00000486085 DCAF1Q9Y4B6 1507 aa9.1□□□□□ -0.95
RTN4-214ENST00000486085 K7ELQ4 463 aaPredicted RBP9.1□□□□□ -0.95
RTN4-214ENST00000486085 ZNF865P0CJ78 1059 aaPredicted RBP9.1□□□□□ -0.95
RTN4-214ENST00000486085 CDKAL1Q5VV42 579 aa9.1□□□□□ -0.95
RTN4-214ENST00000486085 C22orf34Q6ZV56 151 aa9.1□□□□□ -0.95
RTN4-214ENST00000486085 C7orf61Q8IZ16 206 aa9.1□□□□□ -0.95
RTN4-214ENST00000486085 SRPK1Q96SB4 655 aaKnown RBP9.1□□□□□ -0.95
RTN4-214ENST00000486085 ZCCHC6Q5VYS8 1495 aaKnown RBP9.09□□□□□ -0.95
RTN4-214ENST00000486085 HOXA10P31260 410 aaPredicted RBP9.09□□□□□ -0.95
RTN4-214ENST00000486085 SNW1Q13573 536 aaKnown RBP9.09□□□□□ -0.95
RTN4-214ENST00000486085 HEATR6Q6AI08 1181 aaKnown RBP9.09□□□□□ -0.95
RTN4-214ENST00000486085 MRM1Q6IN84 353 aaKnown RBP9.09□□□□□ -0.95
RTN4-214ENST00000486085 HAUS7Q99871 368 aa9.09□□□□□ -0.95
RTN4-214ENST00000486085 PRDM14Q9GZV8 571 aa9.09□□□□□ -0.95
RTN4-214ENST00000486085 ZC3H7BQ9UGR2 993 aaKnown RBP9.09□□□□□ -0.95
RTN4-214ENST00000486085 PLAGL2Q9UPG8 496 aa9.09□□□□□ -0.95
RTN4-214ENST00000486085 ZNF451Q9Y4E5 1061 aa9.09□□□□□ -0.95
RTN4-214ENST00000486085 CEACAM5P06731 702 aa9.08□□□□□ -0.96
RTN4-214ENST00000486085 EPHX1P07099 455 aa9.08□□□□□ -0.96
RTN4-214ENST00000486085 FOSL1P15407 271 aa9.08□□□□□ -0.96
RTN4-214ENST00000486085 TCEAL1Q15170 157 aa9.08□□□□□ -0.96
RTN4-214ENST00000486085 NKPD1Q17RQ9 610 aa9.08□□□□□ -0.96
RTN4-214ENST00000486085 PLD6Q8N2A8 252 aaKnown RBP9.08□□□□□ -0.96
RTN4-214ENST00000486085 MKL1Q969V6 931 aa9.08□□□□□ -0.96
RTN4-214ENST00000486085 FGD4Q96M96 766 aa9.08□□□□□ -0.96
RTN4-214ENST00000486085 DEPDC7Q96QD5 511 aa9.08□□□□□ -0.96
RTN4-214ENST00000486085 CCDC113Q9H0I3 377 aa9.08□□□□□ -0.96
RTN4-214ENST00000486085 MKNK2Q9HBH9 465 aa9.08□□□□□ -0.96
RTN4-214ENST00000486085 CDK11AQ9UQ88 783 aaPredicted RBP9.08□□□□□ -0.96
RTN4-214ENST00000486085 MSRB2Q9Y3D2 182 aa9.08□□□□□ -0.96
RTN4-214ENST00000486085 PCDHB12Q9Y5F1 795 aa9.08□□□□□ -0.96
RTN4-214ENST00000486085 FAM221BA6H8Z2 402 aa9.07□□□□□ -0.96
RTN4-214ENST00000486085 SHOXO15266 292 aa9.07□□□□□ -0.96
RTN4-214ENST00000486085 CD247P20963 164 aa9.07□□□□□ -0.96
RTN4-214ENST00000486085 ANKRD39Q53RE8 183 aa9.07□□□□□ -0.96
RTN4-214ENST00000486085 TMC3Q7Z5M5 1100 aa9.07□□□□□ -0.96
RTN4-214ENST00000486085 ADAT2Q7Z6V5 191 aaKnown RBP9.07□□□□□ -0.96
RTN4-214ENST00000486085 PIWIL2Q8TC59 973 aaKnown RBP9.07□□□□□ -0.96
RTN4-214ENST00000486085 NETO1Q8TDF5 533 aa9.07□□□□□ -0.96
RTN4-214ENST00000486085 ASCC2Q9H1I8 757 aaPredicted RBP9.07□□□□□ -0.96
RTN4-214ENST00000486085 PIF1Q9H611 641 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms