RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 ZSCAN29Q8IWY8 852 aaPredicted RBP6.75□□□□□ -1.33
COPS3-208ENST00000486032 STK11IPQ8N1F8 1099 aa6.75□□□□□ -1.33
COPS3-208ENST00000486032 TGFBRAP1Q8WUH2 860 aa6.75□□□□□ -1.33
COPS3-208ENST00000486032 NANOS1Q8WY41 292 aaKnown RBP6.75□□□□□ -1.33
COPS3-208ENST00000486032 ZDHHC15Q96MV8 337 aa6.75□□□□□ -1.33
COPS3-208ENST00000486032 GGA3Q9NZ52 723 aa6.75□□□□□ -1.33
COPS3-208ENST00000486032 ZNF70Q9UC06 446 aaPredicted RBP6.75□□□□□ -1.33
COPS3-208ENST00000486032 SAP30BPQ9UHR5 308 aaKnown RBP6.75□□□□□ -1.33
COPS3-208ENST00000486032 FZD1Q9UP38 647 aa6.75□□□□□ -1.33
COPS3-208ENST00000486032 TLL2Q9Y6L7 1015 aa6.75□□□□□ -1.33
COPS3-208ENST00000486032 SLC4A4Q9Y6R1 1079 aa6.75□□□□□ -1.33
COPS3-208ENST00000486032 MYH7P12883 1935 aa6.75□□□□□ -1.33
COPS3-208ENST00000486032 POLR2AP24928 1970 aaKnown RBP6.75□□□□□ -1.33
COPS3-208ENST00000486032 GAKO14976 1311 aa6.75□□□□□ -1.33
COPS3-208ENST00000486032 MAST2Q6P0Q8 1798 aa6.74□□□□□ -1.33
COPS3-208ENST00000486032 GPR75-ASB3A0A0A6YYF3 556 aa6.74□□□□□ -1.33
COPS3-208ENST00000486032 PHF20L1A8MW92 1017 aa6.74□□□□□ -1.33
COPS3-208ENST00000486032 CHMLP26374 656 aa6.74□□□□□ -1.33
COPS3-208ENST00000486032 SH3BP2P78314 561 aa6.74□□□□□ -1.33
COPS3-208ENST00000486032 MCMDC2Q4G0Z9 681 aa6.74□□□□□ -1.33
COPS3-208ENST00000486032 ZMYM1Q5SVZ6 1142 aa6.74□□□□□ -1.33
COPS3-208ENST00000486032 CASC1Q6TDU7 716 aa6.74□□□□□ -1.33
COPS3-208ENST00000486032 USP50Q70EL3 339 aaPredicted RBP6.74□□□□□ -1.33
COPS3-208ENST00000486032 ZNF589Q86UQ0 364 aaPredicted RBP6.74□□□□□ -1.33
COPS3-208ENST00000486032 PNMA8AQ86V59 439 aaPredicted RBP6.74□□□□□ -1.33
COPS3-208ENST00000486032 LDHDQ86WU2 507 aa6.74□□□□□ -1.33
COPS3-208ENST00000486032 SDR42E1Q8WUS8 393 aa6.74□□□□□ -1.33
COPS3-208ENST00000486032 RUFY2Q8WXA3 655 aa6.74□□□□□ -1.33
COPS3-208ENST00000486032 DCPSQ96C86 337 aaKnown RBP6.74□□□□□ -1.33
COPS3-208ENST00000486032 CRNKL1Q9BZJ0 848 aaKnown RBP6.74□□□□□ -1.33
COPS3-208ENST00000486032 ZNF408Q9H9D4 720 aa6.74□□□□□ -1.33
COPS3-208ENST00000486032 HELLSQ9NRZ9 838 aa6.74□□□□□ -1.33
COPS3-208ENST00000486032 SSC5DA1L4H1 1573 aa6.74□□□□□ -1.33
COPS3-208ENST00000486032 KRTAP4-8A0A0G2JLE6 195 aa6.73□□□□□ -1.33
COPS3-208ENST00000486032 TDO2P48775 406 aa6.73□□□□□ -1.33
COPS3-208ENST00000486032 TNNI2P48788 182 aa6.73□□□□□ -1.33
COPS3-208ENST00000486032 RHBDL3P58872 404 aa6.73□□□□□ -1.33
COPS3-208ENST00000486032 MAP3K10Q02779 954 aa6.73□□□□□ -1.33
COPS3-208ENST00000486032 NFIAQ12857 509 aa6.73□□□□□ -1.33
COPS3-208ENST00000486032 PRKG1Q13976 671 aa6.73□□□□□ -1.33
COPS3-208ENST00000486032 VPS53Q5VIR6 699 aa6.73□□□□□ -1.33
COPS3-208ENST00000486032 CST9Q5W186 159 aa6.73□□□□□ -1.33
COPS3-208ENST00000486032 MOB2Q70IA6 237 aa6.73□□□□□ -1.33
COPS3-208ENST00000486032 USP48Q86UV5 1035 aa6.73□□□□□ -1.33
COPS3-208ENST00000486032 ZFPM1Q8IX07 1006 aa6.73□□□□□ -1.33
COPS3-208ENST00000486032 DNAJC5GQ8N7S2 189 aa6.73□□□□□ -1.33
COPS3-208ENST00000486032 MTMR14Q8NCE2 650 aa6.73□□□□□ -1.33
COPS3-208ENST00000486032 SMC1BQ8NDV3 1235 aa6.73□□□□□ -1.33
COPS3-208ENST00000486032 DDRGK1Q96HY6 314 aa6.73□□□□□ -1.33
COPS3-208ENST00000486032 STRBPQ96SI9 672 aaKnown RBP6.73□□□□□ -1.33
COPS3-208ENST00000486032 RIOK1Q9BRS2 568 aaKnown RBP6.73□□□□□ -1.33
COPS3-208ENST00000486032 ESYT1Q9BSJ8 1104 aa6.73□□□□□ -1.33
COPS3-208ENST00000486032 MRIQ9BWK5 157 aa6.73□□□□□ -1.33
COPS3-208ENST00000486032 IL25Q9H293 177 aa6.73□□□□□ -1.33
COPS3-208ENST00000486032 ANO2Q9NQ90 1003 aa6.73□□□□□ -1.33
COPS3-208ENST00000486032 DDX4Q9NQI0 724 aaKnown RBP6.73□□□□□ -1.33
COPS3-208ENST00000486032 CCDC171Q6TFL3 1326 aa6.73□□□□□ -1.33
COPS3-208ENST00000486032 RFX7Q2KHR2 1363 aa6.72□□□□□ -1.33
COPS3-208ENST00000486032 MINDY4BA8MYZ0 360 aa6.72□□□□□ -1.33
COPS3-208ENST00000486032 PATL2C9JE40 543 aaKnown RBP6.72□□□□□ -1.33
COPS3-208ENST00000486032 IGSF3O75054 1194 aa6.72□□□□□ -1.33
COPS3-208ENST00000486032 WDHD1O75717 1129 aaPredicted RBP6.72□□□□□ -1.33
COPS3-208ENST00000486032 POLR3DP05423 398 aaPredicted RBP6.72□□□□□ -1.33
COPS3-208ENST00000486032 CYP2D6P10635 497 aa6.72□□□□□ -1.33
COPS3-208ENST00000486032 MMP14P50281 582 aa6.72□□□□□ -1.33
COPS3-208ENST00000486032 MFAP1P55081 439 aaKnown RBP6.72□□□□□ -1.33
COPS3-208ENST00000486032 TNFAIP1Q13829 316 aa6.72□□□□□ -1.33
COPS3-208ENST00000486032 RASA3Q14644 834 aa6.72□□□□□ -1.33
COPS3-208ENST00000486032 PTCRAQ6ISU1 281 aaPredicted RBP6.72□□□□□ -1.33
COPS3-208ENST00000486032 KIAA1211Q6ZU35 1233 aa6.72□□□□□ -1.33
COPS3-208ENST00000486032 KRT26Q7Z3Y9 468 aa6.72□□□□□ -1.33
COPS3-208ENST00000486032 APOBEC3FQ8IUX4 373 aaKnown RBP6.72□□□□□ -1.33
COPS3-208ENST00000486032 ZBED3Q96IU2 234 aaPredicted RBP6.72□□□□□ -1.33
COPS3-208ENST00000486032 ZIC5Q96T25 663 aa6.72□□□□□ -1.33
COPS3-208ENST00000486032 KLF16Q9BXK1 252 aaPredicted RBP6.72□□□□□ -1.33
COPS3-208ENST00000486032 TMEM39BQ9GZU3 492 aa6.72□□□□□ -1.33
COPS3-208ENST00000486032 NAPBQ9H115 298 aa6.72□□□□□ -1.33
COPS3-208ENST00000486032 DEFB129Q9H1M3 183 aa6.72□□□□□ -1.33
COPS3-208ENST00000486032 MCM9Q9NXL9 1143 aa6.72□□□□□ -1.33
COPS3-208ENST00000486032 TRPM7Q96QT4 1865 aa6.72□□□□□ -1.33
COPS3-208ENST00000486032 FLT1P17948 1338 aa6.72□□□□□ -1.33
COPS3-208ENST00000486032 ECM29Q5VYK3 1845 aa6.71□□□□□ -1.33
COPS3-208ENST00000486032 PCNTO95613 3336 aa6.71□□□□□ -1.34
COPS3-208ENST00000486032 CYP2D7A0A087X1C5 515 aa6.71□□□□□ -1.34
COPS3-208ENST00000486032 DDTLA6NHG4 134 aaPredicted RBP6.71□□□□□ -1.34
COPS3-208ENST00000486032 FAM196BA6NMK8 535 aa6.71□□□□□ -1.34
COPS3-208ENST00000486032 GSG1L2A8MUP6 293 aa6.71□□□□□ -1.34
COPS3-208ENST00000486032 SGSM2O43147 1006 aa6.71□□□□□ -1.34
COPS3-208ENST00000486032 UPP2O95045 317 aa6.71□□□□□ -1.34
COPS3-208ENST00000486032 HSPD1P10809 573 aaKnown RBP6.71□□□□□ -1.34
COPS3-208ENST00000486032 BMP2P12643 396 aa6.71□□□□□ -1.34
COPS3-208ENST00000486032 JUNDP17535 347 aa6.71□□□□□ -1.34
COPS3-208ENST00000486032 GNAT2P19087 354 aa6.71□□□□□ -1.34
COPS3-208ENST00000486032 HAND2P61296 217 aa6.71□□□□□ -1.34
COPS3-208ENST00000486032 PTH1RQ03431 593 aa6.71□□□□□ -1.34
COPS3-208ENST00000486032 FSTL1Q12841 308 aa6.71□□□□□ -1.34
COPS3-208ENST00000486032 TTLL12Q14166 644 aaPredicted RBP6.71□□□□□ -1.34
COPS3-208ENST00000486032 TMED8Q6PL24 325 aaPredicted RBP6.71□□□□□ -1.34
COPS3-208ENST00000486032 CDC37L1Q7L3B6 337 aa6.71□□□□□ -1.34
COPS3-208ENST00000486032 CERS3Q8IU89 383 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms