RNA–Protein interactions for RNA: ENST00000485780.1

SHROOM3-207, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 531 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-207ENST00000485780 MTMR4Q9NYA4 1195 aa11.01□□□□□ -0.65
SHROOM3-207ENST00000485780 NYAP2Q9P242 653 aa11.01□□□□□ -0.65
SHROOM3-207ENST00000485780 A0A0G2JMZ2 1700 aa11.01□□□□□ -0.65
SHROOM3-207ENST00000485780 A0A1W2PRG0 241 aa11□□□□□ -0.65
SHROOM3-207ENST00000485780 TSPY2A6NKD2 308 aa11□□□□□ -0.65
SHROOM3-207ENST00000485780 B4E1Z4 1266 aa11□□□□□ -0.65
SHROOM3-207ENST00000485780 C19orf81C9J6K1 198 aa11□□□□□ -0.65
SHROOM3-207ENST00000485780 USP17L10C9JJH3 530 aa11□□□□□ -0.65
SHROOM3-207ENST00000485780 PDHXO00330 501 aa11□□□□□ -0.65
SHROOM3-207ENST00000485780 TLR2O60603 784 aa11□□□□□ -0.65
SHROOM3-207ENST00000485780 KDM4AO75164 1064 aa11□□□□□ -0.65
SHROOM3-207ENST00000485780 SEC24BO95487 1268 aa11□□□□□ -0.65
SHROOM3-207ENST00000485780 TSPY3P0CV98 308 aa11□□□□□ -0.65
SHROOM3-207ENST00000485780 TSPY8P0CW00 308 aa11□□□□□ -0.65
SHROOM3-207ENST00000485780 BACE1P56817 501 aa11□□□□□ -0.65
SHROOM3-207ENST00000485780 TFAP4Q01664 338 aa11□□□□□ -0.65
SHROOM3-207ENST00000485780 RAB3GAP1Q15042 981 aa11□□□□□ -0.65
SHROOM3-207ENST00000485780 FAM47AQ5JRC9 791 aa11□□□□□ -0.65
SHROOM3-207ENST00000485780 PPP4R3BQ5MIZ7 849 aa11□□□□□ -0.65
SHROOM3-207ENST00000485780 RCSD1Q6JBY9 416 aa11□□□□□ -0.65
SHROOM3-207ENST00000485780 GADL1Q6ZQY3 521 aa11□□□□□ -0.65
SHROOM3-207ENST00000485780 FASTKD5Q7L8L6 764 aaKnown RBP11□□□□□ -0.65
SHROOM3-207ENST00000485780 CLEC10AQ8IUN9 316 aa11□□□□□ -0.65
SHROOM3-207ENST00000485780 PROCA1Q8NCQ7 364 aaPredicted RBP11□□□□□ -0.65
SHROOM3-207ENST00000485780 NCOA7Q8NI08 942 aa11□□□□□ -0.65
SHROOM3-207ENST00000485780 ANKS1AQ92625 1134 aa11□□□□□ -0.65
SHROOM3-207ENST00000485780 MKL1Q969V6 931 aa11□□□□□ -0.65
SHROOM3-207ENST00000485780 TMX2Q9Y320 296 aa11□□□□□ -0.65
SHROOM3-207ENST00000485780 MPHOSPH10O00566 681 aaKnown RBP10.99□□□□□ -0.65
SHROOM3-207ENST00000485780 RANBP6O60518 1105 aaKnown RBP10.99□□□□□ -0.65
SHROOM3-207ENST00000485780 EEF2P13639 858 aaKnown RBP10.99□□□□□ -0.65
SHROOM3-207ENST00000485780 ZKSCAN1P17029 563 aaPredicted RBP10.99□□□□□ -0.65
SHROOM3-207ENST00000485780 RGS19P49795 217 aa10.99□□□□□ -0.65
SHROOM3-207ENST00000485780 ANTXR2P58335 489 aa10.99□□□□□ -0.65
SHROOM3-207ENST00000485780 SPP2Q13103 211 aa10.99□□□□□ -0.65
SHROOM3-207ENST00000485780 COL9A3Q14050 684 aaPredicted RBP10.99□□□□□ -0.65
SHROOM3-207ENST00000485780 KRT32Q14532 448 aa10.99□□□□□ -0.65
SHROOM3-207ENST00000485780 ACER1Q8TDN7 264 aa10.99□□□□□ -0.65
SHROOM3-207ENST00000485780 PARK7Q99497 189 aaKnown RBP10.99□□□□□ -0.65
SHROOM3-207ENST00000485780 ZSWIM5Q9P217 1185 aa10.99□□□□□ -0.65
SHROOM3-207ENST00000485780 SNX14Q9Y5W7 946 aa10.99□□□□□ -0.65
SHROOM3-207ENST00000485780 WDR19Q8NEZ3 1342 aa10.99□□□□□ -0.65
SHROOM3-207ENST00000485780 HTTP42858 3142 aa10.99□□□□□ -0.65
SHROOM3-207ENST00000485780 TRIM75PA6NK02 468 aa10.98□□□□□ -0.65
SHROOM3-207ENST00000485780 NMT2O60551 498 aa10.98□□□□□ -0.65
SHROOM3-207ENST00000485780 TTLL1O95922 423 aa10.98□□□□□ -0.65
SHROOM3-207ENST00000485780 USP14P54578 494 aa10.98□□□□□ -0.65
SHROOM3-207ENST00000485780 ANAPC15P60006 121 aa10.98□□□□□ -0.65
SHROOM3-207ENST00000485780 TRDNQ13061 729 aa10.98□□□□□ -0.65
SHROOM3-207ENST00000485780 MTMR2Q13614 643 aa10.98□□□□□ -0.65
SHROOM3-207ENST00000485780 SEC23AQ15436 765 aa10.98□□□□□ -0.65
SHROOM3-207ENST00000485780 ADCK5Q3MIX3 580 aa10.98□□□□□ -0.65
SHROOM3-207ENST00000485780 CCDC178Q5BJE1 867 aa10.98□□□□□ -0.65
SHROOM3-207ENST00000485780 RRP12Q5JTH9 1297 aaKnown RBP10.98□□□□□ -0.65
SHROOM3-207ENST00000485780 CYB5R4Q7L1T6 521 aa10.98□□□□□ -0.65
SHROOM3-207ENST00000485780 IQCA1Q86XH1 822 aa10.98□□□□□ -0.65
SHROOM3-207ENST00000485780 DGKHQ86XP1 1220 aa10.98□□□□□ -0.65
SHROOM3-207ENST00000485780 GMCL1P1Q8NEA9 526 aa10.98□□□□□ -0.65
SHROOM3-207ENST00000485780 TTC14Q96N46 770 aa10.98□□□□□ -0.65
SHROOM3-207ENST00000485780 SH2D4AQ9H788 454 aa10.98□□□□□ -0.65
SHROOM3-207ENST00000485780 VCPKMTQ9H867 229 aa10.98□□□□□ -0.65
SHROOM3-207ENST00000485780 ARHGEF10LQ9HCE6 1279 aa10.98□□□□□ -0.65
SHROOM3-207ENST00000485780 TOMM22Q9NS69 142 aa10.98□□□□□ -0.65
SHROOM3-207ENST00000485780 CPA4Q9UI42 421 aa10.98□□□□□ -0.65
SHROOM3-207ENST00000485780 PTPN22Q9Y2R2 807 aa10.98□□□□□ -0.65
SHROOM3-207ENST00000485780 SLC45A1Q9Y2W3 748 aa10.98□□□□□ -0.65
SHROOM3-207ENST00000485780 ECM2O94769 699 aaPredicted RBP10.97□□□□□ -0.65
SHROOM3-207ENST00000485780 KCNA4P22459 653 aa10.97□□□□□ -0.65
SHROOM3-207ENST00000485780 MCCP23508 829 aa10.97□□□□□ -0.65
SHROOM3-207ENST00000485780 HMGCS2P54868 508 aa10.97□□□□□ -0.65
SHROOM3-207ENST00000485780 LACTBP83111 547 aaPredicted RBP10.97□□□□□ -0.65
SHROOM3-207ENST00000485780 GPAT2Q6NUI2 795 aa10.97□□□□□ -0.65
SHROOM3-207ENST00000485780 USP17L2Q6R6M4 530 aa10.97□□□□□ -0.65
SHROOM3-207ENST00000485780 RALYLQ86SE5 291 aaKnown RBP10.97□□□□□ -0.65
SHROOM3-207ENST00000485780 ENAHQ8N8S7 591 aaPredicted RBP10.97□□□□□ -0.65
SHROOM3-207ENST00000485780 LPAR1Q92633 364 aa10.97□□□□□ -0.65
SHROOM3-207ENST00000485780 ZSCAN10Q96SZ4 725 aaPredicted RBP10.97□□□□□ -0.65
SHROOM3-207ENST00000485780 BACH2Q9BYV9 841 aa10.97□□□□□ -0.65
SHROOM3-207ENST00000485780 TM6SF1Q9BZW5 370 aa10.97□□□□□ -0.65
SHROOM3-207ENST00000485780 EMILIN3Q9NT22 766 aa10.97□□□□□ -0.65
SHROOM3-207ENST00000485780 AGTPBP1Q9UPW5 1226 aa10.97□□□□□ -0.65
SHROOM3-207ENST00000485780 COL11A1P12107 1806 aaPredicted RBP10.96□□□□□ -0.65
SHROOM3-207ENST00000485780 TNKSO95271 1327 aa10.96□□□□□ -0.65
SHROOM3-207ENST00000485780 ADGRA2Q96PE1 1338 aa10.96□□□□□ -0.65
SHROOM3-207ENST00000485780 HMGB1P09429 215 aaKnown RBP10.96□□□□□ -0.65
SHROOM3-207ENST00000485780 VCAM1P19320 739 aa10.96□□□□□ -0.65
SHROOM3-207ENST00000485780 HOXA7P31268 230 aaPredicted RBP10.96□□□□□ -0.65
SHROOM3-207ENST00000485780 MCM5P33992 734 aa10.96□□□□□ -0.65
SHROOM3-207ENST00000485780 RBM25P49756 843 aaKnown RBP10.96□□□□□ -0.65
SHROOM3-207ENST00000485780 EXOSC10Q01780 885 aaKnown RBP10.96□□□□□ -0.65
SHROOM3-207ENST00000485780 SLC9C1Q4G0N8 1177 aa10.96□□□□□ -0.65
SHROOM3-207ENST00000485780 KIAA1755Q5JYT7 1200 aa10.96□□□□□ -0.65
SHROOM3-207ENST00000485780 C17orf99Q6UX52 265 aa10.96□□□□□ -0.65
SHROOM3-207ENST00000485780 NBPF11Q86T75 865 aa10.96□□□□□ -0.65
SHROOM3-207ENST00000485780 FBXL16Q8N461 479 aa10.96□□□□□ -0.65
SHROOM3-207ENST00000485780 IGDCC4Q8TDY8 1250 aa10.96□□□□□ -0.65
SHROOM3-207ENST00000485780 SMCR8Q8TEV9 937 aaPredicted RBP10.96□□□□□ -0.65
SHROOM3-207ENST00000485780 NEK1Q96PY6 1258 aa10.96□□□□□ -0.65
SHROOM3-207ENST00000485780 FEZ1Q99689 392 aa10.96□□□□□ -0.65
SHROOM3-207ENST00000485780 CENPFP49454 3210 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms