RNA–Protein interactions for RNA: ENST00000485612.5

SSR4-210, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-210ENST00000485612 HDAC5Q9UQL6 1122 aa14.96□□□□□ -0.01
SSR4-210ENST00000485612 MYH8P13535 1937 aa14.96□□□□□ -0.02
SSR4-210ENST00000485612 STRNO43815 780 aa14.95□□□□□ -0.02
SSR4-210ENST00000485612 ADORA2AP29274 412 aa14.95□□□□□ -0.02
SSR4-210ENST00000485612 FAAP100Q0VG06 881 aa14.95□□□□□ -0.02
SSR4-210ENST00000485612 MVPQ14764 893 aaKnown RBP14.95□□□□□ -0.02
SSR4-210ENST00000485612 ZYXQ15942 572 aaKnown RBP14.95□□□□□ -0.02
SSR4-210ENST00000485612 LBX2Q6XYB7 198 aa14.95□□□□□ -0.02
SSR4-210ENST00000485612 METTL16Q86W50 562 aaKnown RBP14.95□□□□□ -0.02
SSR4-210ENST00000485612 SH3RF3Q8TEJ3 882 aaPredicted RBP14.95□□□□□ -0.02
SSR4-210ENST00000485612 C12orf42Q96LP6 360 aa14.95□□□□□ -0.02
SSR4-210ENST00000485612 AKAP2Q9Y2D5 859 aa14.95□□□□□ -0.02
SSR4-210ENST00000485612 XIRP2A4UGR9 3374 aa14.94□□□□□ -0.02
SSR4-210ENST00000485612 COBLO75128 1261 aa14.94□□□□□ -0.02
SSR4-210ENST00000485612 TIMP1P01033 207 aa14.94□□□□□ -0.02
SSR4-210ENST00000485612 MCAMP43121 646 aa14.94□□□□□ -0.02
SSR4-210ENST00000485612 TFF2Q03403 129 aa14.94□□□□□ -0.02
SSR4-210ENST00000485612 AAK1Q2M2I8 961 aa14.94□□□□□ -0.02
SSR4-210ENST00000485612 CCDC174Q6PII3 467 aa14.94□□□□□ -0.02
SSR4-210ENST00000485612 CLUAP1Q96AJ1 413 aa14.94□□□□□ -0.02
SSR4-210ENST00000485612 FEZ1Q99689 392 aa14.94□□□□□ -0.02
SSR4-210ENST00000485612 RAI14Q9P0K7 980 aa14.94□□□□□ -0.02
SSR4-210ENST00000485612 MSRAQ9UJ68 235 aa14.94□□□□□ -0.02
SSR4-210ENST00000485612 NAV1Q8NEY1 1877 aa14.93□□□□□ -0.02
SSR4-210ENST00000485612 A0A1W2PQ45 241 aaPredicted RBP14.93□□□□□ -0.02
SSR4-210ENST00000485612 A0A1W2PQY0 241 aa14.93□□□□□ -0.02
SSR4-210ENST00000485612 DCDC2CA8MYV0 355 aa14.93□□□□□ -0.02
SSR4-210ENST00000485612 CCER2I3L3R5 266 aa14.93□□□□□ -0.02
SSR4-210ENST00000485612 ARID4AP29374 1257 aaPredicted RBP14.93□□□□□ -0.02
SSR4-210ENST00000485612 USP14P54578 494 aa14.93□□□□□ -0.02
SSR4-210ENST00000485612 RAB30Q15771 203 aa14.93□□□□□ -0.02
SSR4-210ENST00000485612 TMEM240Q5SV17 173 aa14.93□□□□□ -0.02
SSR4-210ENST00000485612 C16orf59Q7L2K0 433 aa14.93□□□□□ -0.02
SSR4-210ENST00000485612 ANKRD33Q7Z3H0 272 aa14.93□□□□□ -0.02
SSR4-210ENST00000485612 RNF180Q86T96 592 aa14.93□□□□□ -0.02
SSR4-210ENST00000485612 SPATA5Q8NB90 893 aa14.93□□□□□ -0.02
SSR4-210ENST00000485612 FRAT1Q92837 279 aaPredicted RBP14.93□□□□□ -0.02
SSR4-210ENST00000485612 TOX2Q96NM4 488 aa14.93□□□□□ -0.02
SSR4-210ENST00000485612 NOL10Q9BSC4 688 aaKnown RBP14.93□□□□□ -0.02
SSR4-210ENST00000485612 XPNPEP3Q9NQH7 507 aa14.93□□□□□ -0.02
SSR4-210ENST00000485612 SLC5A4Q9NY91 659 aa14.93□□□□□ -0.02
SSR4-210ENST00000485612 SPDYE16A6NNV3 312 aaPredicted RBP14.92□□□□□ -0.02
SSR4-210ENST00000485612 GH2P01242 217 aa14.92□□□□□ -0.02
SSR4-210ENST00000485612 GNAI2P04899 355 aa14.92□□□□□ -0.02
SSR4-210ENST00000485612 RARBP10826 455 aa14.92□□□□□ -0.02
SSR4-210ENST00000485612 KCNQ1P51787 676 aa14.92□□□□□ -0.02
SSR4-210ENST00000485612 PPIGQ13427 754 aaKnown RBP eCLIP14.92□□□□□ -0.027e-9■□□□□ 8.7
SSR4-210ENST00000485612 RASIP1Q5U651 963 aa14.92□□□□□ -0.02
SSR4-210ENST00000485612 MFSD5Q6N075 450 aa14.92□□□□□ -0.02
SSR4-210ENST00000485612 ATF7IPQ6VMQ6 1270 aa14.92□□□□□ -0.02
SSR4-210ENST00000485612 MAPKAPK5Q8IW41 473 aa14.92□□□□□ -0.02
SSR4-210ENST00000485612 MICALL1Q8N3F8 863 aa14.92□□□□□ -0.02
SSR4-210ENST00000485612 TGFBRAP1Q8WUH2 860 aa14.92□□□□□ -0.02
SSR4-210ENST00000485612 MOV10L1Q9BXT6 1211 aaKnown RBP14.92□□□□□ -0.02
SSR4-210ENST00000485612 PALD1Q9ULE6 856 aa14.92□□□□□ -0.02
SSR4-210ENST00000485612 TCF20Q9UGU0 1960 aaKnown RBP14.92□□□□□ -0.02
SSR4-210ENST00000485612 BAG3O95817 575 aa14.91□□□□□ -0.02
SSR4-210ENST00000485612 PGK1P00558 417 aa14.91□□□□□ -0.02
SSR4-210ENST00000485612 VCAM1P19320 739 aa14.91□□□□□ -0.02
SSR4-210ENST00000485612 GORABQ5T7V8 394 aa14.91□□□□□ -0.02
SSR4-210ENST00000485612 TMEM57Q8N5G2 664 aa14.91□□□□□ -0.02
SSR4-210ENST00000485612 NKX2-4Q9H2Z4 354 aa14.91□□□□□ -0.02
SSR4-210ENST00000485612 SLC28A3Q9HAS3 691 aa14.91□□□□□ -0.02
SSR4-210ENST00000485612 SNRKQ9NRH2 765 aa14.91□□□□□ -0.02
SSR4-210ENST00000485612 AATFQ9NY61 560 aaKnown RBP eCLIP14.91□□□□□ -0.02
SSR4-210ENST00000485612 MYH7P12883 1935 aa14.9□□□□□ -0.02
SSR4-210ENST00000485612 BDP1A6H8Y1 2624 aa14.9□□□□□ -0.02
SSR4-210ENST00000485612 GPR37L1O60883 481 aa14.9□□□□□ -0.02
SSR4-210ENST00000485612 ERCC3P19447 782 aa14.9□□□□□ -0.02
SSR4-210ENST00000485612 G3BP1Q13283 466 aaKnown RBP eCLIP14.9□□□□□ -0.02
SSR4-210ENST00000485612 SKIV2LQ15477 1246 aaKnown RBP14.9□□□□□ -0.02
SSR4-210ENST00000485612 SNX27Q96L92 541 aa14.9□□□□□ -0.02
SSR4-210ENST00000485612 KIAA1683Q9H0B3 1180 aa14.9□□□□□ -0.02
SSR4-210ENST00000485612 RPAP3Q9H6T3 665 aaPredicted RBP14.9□□□□□ -0.02
SSR4-210ENST00000485612 C1orf115Q9H7X2 142 aa14.9□□□□□ -0.02
SSR4-210ENST00000485612 STARD7Q9NQZ5 370 aa14.9□□□□□ -0.02
SSR4-210ENST00000485612 LRP2BPQ9P2M1 347 aa14.9□□□□□ -0.02
SSR4-210ENST00000485612 PLXNA1Q9UIW2 1896 aa14.9□□□□□ -0.02
SSR4-210ENST00000485612 FLT1P17948 1338 aa14.9□□□□□ -0.02
SSR4-210ENST00000485612 HLA-DOAP06340 250 aa14.89□□□□□ -0.03
SSR4-210ENST00000485612 ACRP10323 421 aa14.89□□□□□ -0.03
SSR4-210ENST00000485612 PLCG2P16885 1265 aa14.89□□□□□ -0.03
SSR4-210ENST00000485612 RAB3GAP1Q15042 981 aa14.89□□□□□ -0.03
SSR4-210ENST00000485612 ZNF365Q70YC5 407 aa14.89□□□□□ -0.03
SSR4-210ENST00000485612 ADGRA1Q86SQ6 560 aa14.89□□□□□ -0.03
SSR4-210ENST00000485612 TMEM199Q8N511 208 aa14.89□□□□□ -0.03
SSR4-210ENST00000485612 SHCBP1Q8NEM2 672 aa14.89□□□□□ -0.03
SSR4-210ENST00000485612 MAML3Q96JK9 1138 aa14.89□□□□□ -0.03
SSR4-210ENST00000485612 DBNDD2Q9BQY9 259 aa14.89□□□□□ -0.03
SSR4-210ENST00000485612 SPATC1LQ9H0A9 340 aa14.89□□□□□ -0.03
SSR4-210ENST00000485612 HOXC10Q9NYD6 342 aa14.89□□□□□ -0.03
SSR4-210ENST00000485612 SAP30BPQ9UHR5 308 aaKnown RBP14.89□□□□□ -0.03
SSR4-210ENST00000485612 TBX21Q9UL17 535 aa14.89□□□□□ -0.03
SSR4-210ENST00000485612 NCOR1O75376 2440 aa14.88□□□□□ -0.03
SSR4-210ENST00000485612 BAZ2AQ9UIF9 1905 aaKnown RBP14.88□□□□□ -0.03
SSR4-210ENST00000485612 ERC2O15083 957 aa14.88□□□□□ -0.03
SSR4-210ENST00000485612 IPO8O15397 1037 aaKnown RBP14.88□□□□□ -0.03
SSR4-210ENST00000485612 CSF2RAP15509 400 aa14.88□□□□□ -0.03
SSR4-210ENST00000485612 POLA2Q14181 598 aa14.88□□□□□ -0.03
SSR4-210ENST00000485612 PSRC1Q6PGN9 363 aaPredicted RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms