RNA–Protein interactions for RNA: ENST00000485448.1

PLD3-211, Transcript of phospholipase D family member 3, humanhuman

TSL 1 (best)

Gene PLD3, Length 1,308 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLD3-211ENST00000485448 LOC285556D6RIA3 1793 aa20.54■□□□□ 0.88
PLD3-211ENST00000485448 WDR46O15213 610 aaKnown RBP20.53■□□□□ 0.88
PLD3-211ENST00000485448 CTGFP29279 349 aa20.53■□□□□ 0.88
PLD3-211ENST00000485448 NT5C2P49902 561 aa20.53■□□□□ 0.88
PLD3-211ENST00000485448 UBXN2AP68543 259 aa20.53■□□□□ 0.88
PLD3-211ENST00000485448 ATP2B2Q01814 1243 aa20.53■□□□□ 0.88
PLD3-211ENST00000485448 ZNF333Q96JL9 665 aa20.53■□□□□ 0.88
PLD3-211ENST00000485448 FAM227BQ96M60 508 aa20.53■□□□□ 0.88
PLD3-211ENST00000485448 CENPBP07199 599 aaPredicted RBP20.53■□□□□ 0.88
PLD3-211ENST00000485448 TSPY3P0CV98 308 aa20.53■□□□□ 0.88
PLD3-211ENST00000485448 TSPY8P0CW00 308 aa20.53■□□□□ 0.88
PLD3-211ENST00000485448 PCP11498 1178 aaKnown RBP20.53■□□□□ 0.88
PLD3-211ENST00000485448 FLT3LGP49771 235 aa20.53■□□□□ 0.88
PLD3-211ENST00000485448 ERVK-9P63128 1117 aa20.53■□□□□ 0.88
PLD3-211ENST00000485448 ERVK-24P63145 666 aa20.53■□□□□ 0.88
PLD3-211ENST00000485448 PRKCZQ05513 592 aa20.53■□□□□ 0.88
PLD3-211ENST00000485448 NMIQ13287 307 aaPredicted RBP20.53■□□□□ 0.88
PLD3-211ENST00000485448 MKL1Q969V6 931 aa20.53■□□□□ 0.88
PLD3-211ENST00000485448 TANGO6Q9C0B7 1094 aa20.53■□□□□ 0.88
PLD3-211ENST00000485448 ZMYM6O95789 1325 aa20.52■□□□□ 0.88
PLD3-211ENST00000485448 CCDC171Q6TFL3 1326 aa20.52■□□□□ 0.88
PLD3-211ENST00000485448 FGAP02671 866 aa20.52■□□□□ 0.87
PLD3-211ENST00000485448 HSPD1P10809 573 aaKnown RBP20.52■□□□□ 0.87
PLD3-211ENST00000485448 NEDD1Q8NHV4 660 aa20.52■□□□□ 0.87
PLD3-211ENST00000485448 SOCS4Q8WXH5 440 aa20.52■□□□□ 0.87
PLD3-211ENST00000485448 CWC22Q9HCG8 908 aaKnown RBP20.52■□□□□ 0.87
PLD3-211ENST00000485448 BIN2Q9UBW5 565 aaPredicted RBP20.52■□□□□ 0.87
PLD3-211ENST00000485448 A0A0D9SFI3 127 aa20.51■□□□□ 0.87
PLD3-211ENST00000485448 SMIM22K7EJ46 135 aa20.51■□□□□ 0.87
PLD3-211ENST00000485448 ADCY3O60266 1144 aa20.51■□□□□ 0.87
PLD3-211ENST00000485448 ECM2O94769 699 aaPredicted RBP20.51■□□□□ 0.87
PLD3-211ENST00000485448 TTLL1O95922 423 aa20.51■□□□□ 0.87
PLD3-211ENST00000485448 SOX10P56693 466 aa20.51■□□□□ 0.87
PLD3-211ENST00000485448 CCDC129Q6ZRS4 1044 aa20.51■□□□□ 0.87
PLD3-211ENST00000485448 TRMT44Q8IYL2 757 aaKnown RBP20.51■□□□□ 0.87
PLD3-211ENST00000485448 STK11IPQ8N1F8 1099 aa20.51■□□□□ 0.87
PLD3-211ENST00000485448 PAGR1Q9BTK6 254 aa20.51■□□□□ 0.87
PLD3-211ENST00000485448 BAZ2AQ9UIF9 1905 aaKnown RBP20.5■□□□□ 0.87
PLD3-211ENST00000485448 TFAP4Q01664 338 aa20.5■□□□□ 0.87
PLD3-211ENST00000485448 CWC27Q6UX04 472 aaKnown RBP20.5■□□□□ 0.87
PLD3-211ENST00000485448 NKX2-3Q8TAU0 364 aa20.5■□□□□ 0.87
PLD3-211ENST00000485448 RUFY2Q8WXA3 655 aa20.5■□□□□ 0.87
PLD3-211ENST00000485448 NUDT12Q9BQG2 462 aa20.5■□□□□ 0.87
PLD3-211ENST00000485448 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.5■□□□□ 0.87
PLD3-211ENST00000485448 RNF41Q9H4P4 317 aaPredicted RBP20.5■□□□□ 0.87
PLD3-211ENST00000485448 MTMR4Q9NYA4 1195 aa20.5■□□□□ 0.87
PLD3-211ENST00000485448 CLIP2Q9UDT6 1046 aa20.5■□□□□ 0.87
PLD3-211ENST00000485448 CTNNA3Q9UI47 895 aa20.5■□□□□ 0.87
PLD3-211ENST00000485448 TSPY2A6NKD2 308 aa20.49■□□□□ 0.87
PLD3-211ENST00000485448 PRDM1O75626 825 aa20.49■□□□□ 0.87
PLD3-211ENST00000485448 FLOT1O75955 427 aa20.49■□□□□ 0.87
PLD3-211ENST00000485448 FGRP09769 529 aa20.49■□□□□ 0.87
PLD3-211ENST00000485448 XRCC5P13010 732 aaKnown RBP20.49■□□□□ 0.87
PLD3-211ENST00000485448 TTC22Q5TAA0 569 aa20.49■□□□□ 0.87
PLD3-211ENST00000485448 SH3TC2Q8TF17 1288 aa20.49■□□□□ 0.87
PLD3-211ENST00000485448 TXNRD2Q9NNW7 524 aa20.49■□□□□ 0.87
PLD3-211ENST00000485448 GABRQQ9UN88 632 aa20.49■□□□□ 0.87
PLD3-211ENST00000485448 IGKV6D-41A0A0C4DH26 115 aa20.48■□□□□ 0.87
PLD3-211ENST00000485448 SPDYE16A6NNV3 312 aaPredicted RBP20.48■□□□□ 0.87
PLD3-211ENST00000485448 F5H6K3 240 aa20.48■□□□□ 0.87
PLD3-211ENST00000485448 STRNO43815 780 aa20.48■□□□□ 0.87
PLD3-211ENST00000485448 ORC4O43929 436 aa20.48■□□□□ 0.87
PLD3-211ENST00000485448 DSG3P32926 999 aa20.48■□□□□ 0.87
PLD3-211ENST00000485448 KLRC3Q07444 240 aa20.48■□□□□ 0.87
PLD3-211ENST00000485448 Q3C1V9 767 aa20.48■□□□□ 0.87
PLD3-211ENST00000485448 VPS53Q5VIR6 699 aa20.48■□□□□ 0.87
PLD3-211ENST00000485448 CENPQQ7L2Z9 268 aaPredicted RBP20.48■□□□□ 0.87
PLD3-211ENST00000485448 PLEKHH3Q7Z736 793 aa20.48■□□□□ 0.87
PLD3-211ENST00000485448 SPICE1Q8N0Z3 855 aa20.48■□□□□ 0.87
PLD3-211ENST00000485448 GJD2Q9UKL4 321 aa20.48■□□□□ 0.87
PLD3-211ENST00000485448 IVNS1ABPQ9Y6Y0 642 aa20.48■□□□□ 0.87
PLD3-211ENST00000485448 ZNF213O14771 459 aa20.47■□□□□ 0.87
PLD3-211ENST00000485448 FOXP2O15409 715 aa20.47■□□□□ 0.87
PLD3-211ENST00000485448 RAD21O60216 631 aa20.47■□□□□ 0.87
PLD3-211ENST00000485448 PDE4AP27815 886 aa20.47■□□□□ 0.87
PLD3-211ENST00000485448 CEP95Q96GE4 821 aa20.47■□□□□ 0.87
PLD3-211ENST00000485448 PLIN4Q96Q06 1357 aa20.46■□□□□ 0.87
PLD3-211ENST00000485448 RANBP6O60518 1105 aaKnown RBP20.46■□□□□ 0.87
PLD3-211ENST00000485448 MFSD6Q6ZSS7 791 aa20.46■□□□□ 0.87
PLD3-211ENST00000485448 GPR142Q7Z601 462 aa20.46■□□□□ 0.87
PLD3-211ENST00000485448 ZNF589Q86UQ0 364 aaPredicted RBP20.46■□□□□ 0.87
PLD3-211ENST00000485448 GMCL1P1Q8NEA9 526 aa20.46■□□□□ 0.87
PLD3-211ENST00000485448 SHCBP1Q8NEM2 672 aa20.46■□□□□ 0.87
PLD3-211ENST00000485448 DSCC1Q9BVC3 393 aa20.46■□□□□ 0.87
PLD3-211ENST00000485448 MROH8Q9H579 483 aa20.46■□□□□ 0.87
PLD3-211ENST00000485448 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.46■□□□□ 0.87
PLD3-211ENST00000485448 SLC25A27O95847 323 aa20.45■□□□□ 0.86
PLD3-211ENST00000485448 FDX1P10109 184 aa20.45■□□□□ 0.86
PLD3-211ENST00000485448 COPB2P35606 906 aa20.45■□□□□ 0.86
PLD3-211ENST00000485448 RGS2P41220 211 aa20.45■□□□□ 0.86
PLD3-211ENST00000485448 CTDSPL2Q05D32 466 aa20.45■□□□□ 0.86
PLD3-211ENST00000485448 CLEC10AQ8IUN9 316 aa20.45■□□□□ 0.86
PLD3-211ENST00000485448 PRPF38AQ8NAV1 312 aaKnown RBP20.45■□□□□ 0.86
PLD3-211ENST00000485448 TOMM22Q9NS69 142 aa20.45■□□□□ 0.86
PLD3-211ENST00000485448 ADAMTS5Q9UNA0 930 aa20.45■□□□□ 0.86
PLD3-211ENST00000485448 SLC15A5A6NIM6 579 aa20.44■□□□□ 0.86
PLD3-211ENST00000485448 CNMDO75829 334 aa20.44■□□□□ 0.86
PLD3-211ENST00000485448 FAM47AQ5JRC9 791 aa20.44■□□□□ 0.86
PLD3-211ENST00000485448 KIAA1755Q5JYT7 1200 aa20.44■□□□□ 0.86
PLD3-211ENST00000485448 AKNAD1Q5T1N1 836 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms