RNA–Protein interactions for RNA: ENST00000485035.1

SOX2-OT-209, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 561 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-209ENST00000485035 USP17L17D6RBQ6 530 aa16.08■□□□□ 0.16
SOX2-OT-209ENST00000485035 USP17L19D6RCP7 530 aa16.08■□□□□ 0.16
SOX2-OT-209ENST00000485035 USP17L20D6RJB6 530 aa16.08■□□□□ 0.16
SOX2-OT-209ENST00000485035 RANBP6O60518 1105 aaKnown RBP16.08■□□□□ 0.16
SOX2-OT-209ENST00000485035 NMT2O60551 498 aa16.08■□□□□ 0.16
SOX2-OT-209ENST00000485035 LACTBP83111 547 aaPredicted RBP16.08■□□□□ 0.16
SOX2-OT-209ENST00000485035 USP17L24Q0WX57 530 aa16.08■□□□□ 0.16
SOX2-OT-209ENST00000485035 IMMTQ16891 758 aaKnown RBP16.08■□□□□ 0.16
SOX2-OT-209ENST00000485035 CATSPERGQ6ZRH7 1159 aa16.08■□□□□ 0.16
SOX2-OT-209ENST00000485035 MFSD6Q6ZSS7 791 aa16.08■□□□□ 0.16
SOX2-OT-209ENST00000485035 TNS4Q8IZW8 715 aa16.08■□□□□ 0.16
SOX2-OT-209ENST00000485035 ANKRD13CQ8N6S4 541 aa16.08■□□□□ 0.16
SOX2-OT-209ENST00000485035 LPAR1Q92633 364 aa16.08■□□□□ 0.16
SOX2-OT-209ENST00000485035 MCOLN1Q9GZU1 580 aa16.08■□□□□ 0.16
SOX2-OT-209ENST00000485035 TOMM22Q9NS69 142 aa16.08■□□□□ 0.16
SOX2-OT-209ENST00000485035 CLIP2Q9UDT6 1046 aa16.08■□□□□ 0.16
SOX2-OT-209ENST00000485035 PEX10O60683 326 aa16.07■□□□□ 0.16
SOX2-OT-209ENST00000485035 CDC45O75419 566 aa16.07■□□□□ 0.16
SOX2-OT-209ENST00000485035 TTLL1O95922 423 aa16.07■□□□□ 0.16
SOX2-OT-209ENST00000485035 PCP11498 1178 aaKnown RBP16.07■□□□□ 0.16
SOX2-OT-209ENST00000485035 CTGFP29279 349 aa16.07■□□□□ 0.16
SOX2-OT-209ENST00000485035 HERVK_113P62684 666 aa16.07■□□□□ 0.16
SOX2-OT-209ENST00000485035 POTEEQ6S8J3 1075 aa16.07■□□□□ 0.16
SOX2-OT-209ENST00000485035 OTOP1Q7RTM1 612 aa16.07■□□□□ 0.16
SOX2-OT-209ENST00000485035 MKL1Q969V6 931 aa16.07■□□□□ 0.16
SOX2-OT-209ENST00000485035 LSG1Q9H089 658 aaKnown RBP16.07■□□□□ 0.16
SOX2-OT-209ENST00000485035 RNF41Q9H4P4 317 aaPredicted RBP16.07■□□□□ 0.16
SOX2-OT-209ENST00000485035 MYH8P13535 1937 aa16.07■□□□□ 0.16
SOX2-OT-209ENST00000485035 ECM2O94769 699 aaPredicted RBP16.06■□□□□ 0.16
SOX2-OT-209ENST00000485035 GCLCP48506 637 aaPredicted RBP16.06■□□□□ 0.16
SOX2-OT-209ENST00000485035 FAM110CQ1W6H9 321 aa16.06■□□□□ 0.16
SOX2-OT-209ENST00000485035 LRRC47Q8N1G4 583 aaKnown RBP16.06■□□□□ 0.16
SOX2-OT-209ENST00000485035 MAP4K1Q92918 833 aa16.06■□□□□ 0.16
SOX2-OT-209ENST00000485035 TANGO6Q9C0B7 1094 aa16.06■□□□□ 0.16
SOX2-OT-209ENST00000485035 GOPCQ9HD26 462 aa16.06■□□□□ 0.16
SOX2-OT-209ENST00000485035 TXNRD2Q9NNW7 524 aa16.06■□□□□ 0.16
SOX2-OT-209ENST00000485035 TRIM17Q9Y577 477 aa16.06■□□□□ 0.16
SOX2-OT-209ENST00000485035 TAF6LQ9Y6J9 622 aa16.06■□□□□ 0.16
SOX2-OT-209ENST00000485035 U3KPZ7 1027 aaPredicted RBP16.06■□□□□ 0.16
SOX2-OT-209ENST00000485035 CASP8AP2Q9UKL3 1982 aa16.06■□□□□ 0.16
SOX2-OT-209ENST00000485035 SPDYE16A6NNV3 312 aaPredicted RBP16.05■□□□□ 0.16
SOX2-OT-209ENST00000485035 F5H6K3 240 aa16.05■□□□□ 0.16
SOX2-OT-209ENST00000485035 WDR46O15213 610 aaKnown RBP16.05■□□□□ 0.16
SOX2-OT-209ENST00000485035 NDUFB10O96000 172 aa16.05■□□□□ 0.16
SOX2-OT-209ENST00000485035 CYP21A2P08686 494 aa16.05■□□□□ 0.16
SOX2-OT-209ENST00000485035 NOVP48745 357 aa16.05■□□□□ 0.16
SOX2-OT-209ENST00000485035 KLRC3Q07444 240 aa16.05■□□□□ 0.16
SOX2-OT-209ENST00000485035 TRIM47Q96LD4 638 aa16.05■□□□□ 0.16
SOX2-OT-209ENST00000485035 EFCC1Q9HA90 598 aa16.05■□□□□ 0.16
SOX2-OT-209ENST00000485035 MORF4L1Q9UBU8 362 aa16.05■□□□□ 0.16
SOX2-OT-209ENST00000485035 SYNPO2Q9UMS6 1093 aa16.05■□□□□ 0.16
SOX2-OT-209ENST00000485035 STX8Q9UNK0 236 aa16.05■□□□□ 0.16
SOX2-OT-209ENST00000485035 RBM8AQ9Y5S9 174 aaKnown RBP16.05■□□□□ 0.16
SOX2-OT-209ENST00000485035 LAMA4Q16363 1823 aa16.05■□□□□ 0.16
SOX2-OT-209ENST00000485035 RAD21O60216 631 aa16.04■□□□□ 0.16
SOX2-OT-209ENST00000485035 CNMDO75829 334 aa16.04■□□□□ 0.16
SOX2-OT-209ENST00000485035 PSMC4P43686 418 aa16.04■□□□□ 0.16
SOX2-OT-209ENST00000485035 KIF22Q14807 665 aa16.04■□□□□ 0.16
SOX2-OT-209ENST00000485035 FAM83BQ5T0W9 1011 aa16.04■□□□□ 0.16
SOX2-OT-209ENST00000485035 GMCL1P1Q8NEA9 526 aa16.04■□□□□ 0.16
SOX2-OT-209ENST00000485035 ESR2Q92731 530 aa16.04■□□□□ 0.16
SOX2-OT-209ENST00000485035 NUP88Q99567 741 aaPredicted RBP16.04■□□□□ 0.16
SOX2-OT-209ENST00000485035 TCP11L1Q9NUJ3 509 aa16.04■□□□□ 0.16
SOX2-OT-209ENST00000485035 RBPJLQ9UBG7 517 aa16.04■□□□□ 0.16
SOX2-OT-209ENST00000485035 B4E1Z4 1266 aa16.03■□□□□ 0.16
SOX2-OT-209ENST00000485035 KDM4AO75164 1064 aa16.03■□□□□ 0.16
SOX2-OT-209ENST00000485035 COG2Q14746 738 aa16.03■□□□□ 0.16
SOX2-OT-209ENST00000485035 PPP4R3BQ5MIZ7 849 aa16.03■□□□□ 0.16
SOX2-OT-209ENST00000485035 CASC1Q6TDU7 716 aa16.03■□□□□ 0.16
SOX2-OT-209ENST00000485035 LBX2Q6XYB7 198 aa16.03■□□□□ 0.16
SOX2-OT-209ENST00000485035 KIAA1211Q6ZU35 1233 aa16.03■□□□□ 0.16
SOX2-OT-209ENST00000485035 GTF3C2Q8WUA4 911 aaPredicted RBP16.03■□□□□ 0.16
SOX2-OT-209ENST00000485035 PAGR1Q9BTK6 254 aa16.03■□□□□ 0.16
SOX2-OT-209ENST00000485035 ANO2Q9NQ90 1003 aa16.03■□□□□ 0.16
SOX2-OT-209ENST00000485035 FBXO28Q9NVF7 368 aa16.03■□□□□ 0.16
SOX2-OT-209ENST00000485035 ZSWIM8A7E2V4 1837 aa16.03■□□□□ 0.16
SOX2-OT-209ENST00000485035 FLOT1O75955 427 aa16.02■□□□□ 0.16
SOX2-OT-209ENST00000485035 PKN2Q16513 984 aaKnown RBP16.02■□□□□ 0.16
SOX2-OT-209ENST00000485035 Q3C1V9 767 aa16.02■□□□□ 0.16
SOX2-OT-209ENST00000485035 RCSD1Q6JBY9 416 aa16.02■□□□□ 0.16
SOX2-OT-209ENST00000485035 STOX1Q6ZVD7 989 aa16.02■□□□□ 0.16
SOX2-OT-209ENST00000485035 ZKSCAN3Q9BRR0 538 aa16.02■□□□□ 0.16
SOX2-OT-209ENST00000485035 BTBD7Q9P203 1132 aa16.02■□□□□ 0.16
SOX2-OT-209ENST00000485035 FMNL1O95466 1100 aaPredicted RBP16.01■□□□□ 0.15
SOX2-OT-209ENST00000485035 DSG3P32926 999 aa16.01■□□□□ 0.15
SOX2-OT-209ENST00000485035 NT5C2P49902 561 aa16.01■□□□□ 0.15
SOX2-OT-209ENST00000485035 FCGRTP55899 365 aa16.01■□□□□ 0.15
SOX2-OT-209ENST00000485035 ERVK-9P63128 1117 aa16.01■□□□□ 0.15
SOX2-OT-209ENST00000485035 ERVK-24P63145 666 aa16.01■□□□□ 0.15
SOX2-OT-209ENST00000485035 ARHGEF6Q15052 776 aa16.01■□□□□ 0.15
SOX2-OT-209ENST00000485035 SLFN13Q68D06 897 aa16.01■□□□□ 0.15
SOX2-OT-209ENST00000485035 FBXO46Q6PJ61 603 aaPredicted RBP16.01■□□□□ 0.15
SOX2-OT-209ENST00000485035 RASGRP2Q7LDG7 609 aa16.01■□□□□ 0.15
SOX2-OT-209ENST00000485035 GPRC5AQ8NFJ5 357 aa16.01■□□□□ 0.15
SOX2-OT-209ENST00000485035 ATG4CQ96DT6 458 aa16.01■□□□□ 0.15
SOX2-OT-209ENST00000485035 TMEM47Q9BQJ4 181 aa16.01■□□□□ 0.15
SOX2-OT-209ENST00000485035 KRT23Q9C075 422 aa16.01■□□□□ 0.15
SOX2-OT-209ENST00000485035 CNNM2Q9H8M5 875 aa16.01■□□□□ 0.15
SOX2-OT-209ENST00000485035 ZSWIM5Q9P217 1185 aa16.01■□□□□ 0.15
SOX2-OT-209ENST00000485035 PTPN22Q9Y2R2 807 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms