RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 TMX2Q9Y320 296 aa19.28■□□□□ 0.68
DDR1-246ENST00000485023 GREB1LQ9C091 1923 aaPredicted RBP19.27■□□□□ 0.68
DDR1-246ENST00000485023 FCGRTP55899 365 aa19.27■□□□□ 0.68
DDR1-246ENST00000485023 TFAP4Q01664 338 aa19.27■□□□□ 0.68
DDR1-246ENST00000485023 FAM110CQ1W6H9 321 aa19.27■□□□□ 0.68
DDR1-246ENST00000485023 CEP95Q96GE4 821 aa19.27■□□□□ 0.68
DDR1-246ENST00000485023 VCPKMTQ9H867 229 aa19.27■□□□□ 0.68
DDR1-246ENST00000485023 ANAPC4Q9UJX5 808 aa19.27■□□□□ 0.68
DDR1-246ENST00000485023 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.27■□□□□ 0.68
DDR1-246ENST00000485023 PTCH2Q9Y6C5 1203 aa19.27■□□□□ 0.68
DDR1-246ENST00000485023 RANBP6O60518 1105 aaKnown RBP19.26■□□□□ 0.67
DDR1-246ENST00000485023 CHMLP26374 656 aa19.26■□□□□ 0.67
DDR1-246ENST00000485023 CATSPERGQ6ZRH7 1159 aa19.26■□□□□ 0.67
DDR1-246ENST00000485023 TBC1D10CQ8IV04 446 aa19.26■□□□□ 0.67
DDR1-246ENST00000485023 LRRC47Q8N1G4 583 aaKnown RBP19.26■□□□□ 0.67
DDR1-246ENST00000485023 TXNRD2Q9NNW7 524 aa19.26■□□□□ 0.67
DDR1-246ENST00000485023 CLIP2Q9UDT6 1046 aa19.26■□□□□ 0.67
DDR1-246ENST00000485023 ZMYM6O95789 1325 aa19.25■□□□□ 0.67
DDR1-246ENST00000485023 IGKV6D-41A0A0C4DH26 115 aa19.25■□□□□ 0.67
DDR1-246ENST00000485023 TSPY2A6NKD2 308 aa19.25■□□□□ 0.67
DDR1-246ENST00000485023 TNPO2O14787 897 aaKnown RBP19.25■□□□□ 0.67
DDR1-246ENST00000485023 NBPF3Q9H094 633 aa19.25■□□□□ 0.67
DDR1-246ENST00000485023 GOPCQ9HD26 462 aa19.25■□□□□ 0.67
DDR1-246ENST00000485023 MYPNQ86TC9 1320 aa19.25■□□□□ 0.67
DDR1-246ENST00000485023 PLIN4Q96Q06 1357 aa19.24■□□□□ 0.67
DDR1-246ENST00000485023 NMT2O60551 498 aa19.24■□□□□ 0.67
DDR1-246ENST00000485023 PRKCZQ05513 592 aa19.24■□□□□ 0.67
DDR1-246ENST00000485023 POTEEQ6S8J3 1075 aa19.24■□□□□ 0.67
DDR1-246ENST00000485023 NEDD1Q8NHV4 660 aa19.24■□□□□ 0.67
DDR1-246ENST00000485023 LPAR1Q92633 364 aa19.24■□□□□ 0.67
DDR1-246ENST00000485023 CHMP4CQ96CF2 233 aa19.24■□□□□ 0.67
DDR1-246ENST00000485023 NUP88Q99567 741 aaPredicted RBP19.24■□□□□ 0.67
DDR1-246ENST00000485023 RBPJLQ9UBG7 517 aa19.24■□□□□ 0.67
DDR1-246ENST00000485023 RAD50Q92878 1312 aa19.24■□□□□ 0.67
DDR1-246ENST00000485023 SPDYE16A6NNV3 312 aaPredicted RBP19.23■□□□□ 0.67
DDR1-246ENST00000485023 ZNF213O14771 459 aa19.23■□□□□ 0.67
DDR1-246ENST00000485023 WDR46O15213 610 aaKnown RBP19.23■□□□□ 0.67
DDR1-246ENST00000485023 FAM83BQ5T0W9 1011 aa19.23■□□□□ 0.67
DDR1-246ENST00000485023 GPRC5AQ8NFJ5 357 aa19.23■□□□□ 0.67
DDR1-246ENST00000485023 RUFY2Q8WXA3 655 aa19.23■□□□□ 0.67
DDR1-246ENST00000485023 DSCC1Q9BVC3 393 aa19.23■□□□□ 0.67
DDR1-246ENST00000485023 MTMR4Q9NYA4 1195 aa19.23■□□□□ 0.67
DDR1-246ENST00000485023 NYAP2Q9P242 653 aa19.23■□□□□ 0.67
DDR1-246ENST00000485023 MORF4L1Q9UBU8 362 aa19.23■□□□□ 0.67
DDR1-246ENST00000485023 SRRDQ9UH36 339 aa19.23■□□□□ 0.67
DDR1-246ENST00000485023 GABRQQ9UN88 632 aa19.23■□□□□ 0.67
DDR1-246ENST00000485023 NEDD4P46934 1319 aa19.23■□□□□ 0.67
DDR1-246ENST00000485023 ORC4O43929 436 aa19.22■□□□□ 0.67
DDR1-246ENST00000485023 FLOT1O75955 427 aa19.22■□□□□ 0.67
DDR1-246ENST00000485023 TTLL1O95922 423 aa19.22■□□□□ 0.67
DDR1-246ENST00000485023 MYCP01106 439 aaPredicted RBP19.22■□□□□ 0.67
DDR1-246ENST00000485023 GNRH1P01148 92 aa19.22■□□□□ 0.67
DDR1-246ENST00000485023 SOX10P56693 466 aa19.22■□□□□ 0.67
DDR1-246ENST00000485023 ERVK-9P63128 1117 aa19.22■□□□□ 0.67
DDR1-246ENST00000485023 ERVK-24P63145 666 aa19.22■□□□□ 0.67
DDR1-246ENST00000485023 FBXO28Q9NVF7 368 aa19.22■□□□□ 0.67
DDR1-246ENST00000485023 ISY1Q9ULR0 285 aaKnown RBP19.22■□□□□ 0.67
DDR1-246ENST00000485023 STX8Q9UNK0 236 aa19.22■□□□□ 0.67
DDR1-246ENST00000485023 LAMA4Q16363 1823 aa19.21■□□□□ 0.67
DDR1-246ENST00000485023 F5H6K3 240 aa19.21■□□□□ 0.67
DDR1-246ENST00000485023 CNMDO75829 334 aa19.21■□□□□ 0.67
DDR1-246ENST00000485023 NDUFB10O96000 172 aa19.21■□□□□ 0.67
DDR1-246ENST00000485023 HOXD10P28358 340 aa19.21■□□□□ 0.67
DDR1-246ENST00000485023 KLRC3Q07444 240 aa19.21■□□□□ 0.67
DDR1-246ENST00000485023 Q3C1V9 767 aa19.21■□□□□ 0.67
DDR1-246ENST00000485023 SLC9C1Q4G0N8 1177 aa19.21■□□□□ 0.67
DDR1-246ENST00000485023 AKNAD1Q5T1N1 836 aa19.21■□□□□ 0.67
DDR1-246ENST00000485023 MFSD6Q6ZSS7 791 aa19.21■□□□□ 0.67
DDR1-246ENST00000485023 CCAR1Q8IX12 1150 aaKnown RBP19.21■□□□□ 0.67
DDR1-246ENST00000485023 NKX2-3Q8TAU0 364 aa19.21■□□□□ 0.67
DDR1-246ENST00000485023 RAET1EQ8TD07 263 aa19.21■□□□□ 0.67
DDR1-246ENST00000485023 SH3TC2Q8TF17 1288 aa19.21■□□□□ 0.67
DDR1-246ENST00000485023 PORCNQ9H237 461 aa19.21■□□□□ 0.67
DDR1-246ENST00000485023 BTBD7Q9P203 1132 aa19.21■□□□□ 0.67
DDR1-246ENST00000485023 MTMR7Q9Y216 660 aa19.21■□□□□ 0.67
DDR1-246ENST00000485023 MGAMO43451 1857 aa19.2■□□□□ 0.66
DDR1-246ENST00000485023 PTH1RQ03431 593 aa19.2■□□□□ 0.66
DDR1-246ENST00000485023 COG2Q14746 738 aa19.2■□□□□ 0.66
DDR1-246ENST00000485023 IMMTQ16891 758 aaKnown RBP19.2■□□□□ 0.66
DDR1-246ENST00000485023 GTF3C2Q8WUA4 911 aaPredicted RBP19.2■□□□□ 0.66
DDR1-246ENST00000485023 STAG1Q8WVM7 1258 aa19.2■□□□□ 0.66
DDR1-246ENST00000485023 COA7Q96BR5 231 aa19.2■□□□□ 0.66
DDR1-246ENST00000485023 ATG4CQ96DT6 458 aa19.2■□□□□ 0.66
DDR1-246ENST00000485023 CWC22Q9HCG8 908 aaKnown RBP19.2■□□□□ 0.66
DDR1-246ENST00000485023 IL17RBQ9NRM6 502 aa19.2■□□□□ 0.66
DDR1-246ENST00000485023 SGSM2O43147 1006 aa19.19■□□□□ 0.66
DDR1-246ENST00000485023 FGRP09769 529 aa19.19■□□□□ 0.66
DDR1-246ENST00000485023 FLT3LGP49771 235 aa19.19■□□□□ 0.66
DDR1-246ENST00000485023 BMP2KLQ5H9B9 411 aa19.19■□□□□ 0.66
DDR1-246ENST00000485023 WDR78Q5VTH9 848 aa19.19■□□□□ 0.66
DDR1-246ENST00000485023 RASGRP2Q7LDG7 609 aa19.19■□□□□ 0.66
DDR1-246ENST00000485023 RNF41Q9H4P4 317 aaPredicted RBP19.19■□□□□ 0.66
DDR1-246ENST00000485023 CTNNA3Q9UI47 895 aa19.19■□□□□ 0.66
DDR1-246ENST00000485023 RABGAP1Q9Y3P9 1069 aa19.19■□□□□ 0.66
DDR1-246ENST00000485023 HTTP42858 3142 aa19.19■□□□□ 0.66
DDR1-246ENST00000485023 MYH4Q9Y623 1939 aa19.18■□□□□ 0.66
DDR1-246ENST00000485023 DSG3P32926 999 aa19.18■□□□□ 0.66
DDR1-246ENST00000485023 PRMT2P55345 433 aa19.18■□□□□ 0.66
DDR1-246ENST00000485023 PLS1Q14651 629 aa19.18■□□□□ 0.66
DDR1-246ENST00000485023 ZKSCAN3Q9BRR0 538 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms