RNA–Protein interactions for RNA: ENST00000484806.1

SFI1-223, Transcript of SFI1 centrin binding protein, human

TSL 4

Gene SFI1, Length 567 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFI1-223	ENST00000484806	USP14	P54578	494 aa		9.36	□□□□□ -0.91
SFI1-223	ENST00000484806	NUCB2	P80303	420 aa		9.36	□□□□□ -0.91
SFI1-223	ENST00000484806	SSRP1	Q08945	709 aa	Known RBP	9.36	□□□□□ -0.91
SFI1-223	ENST00000484806	TROAP	Q12815	778 aa		9.36	□□□□□ -0.91
SFI1-223	ENST00000484806	TTLL12	Q14166	644 aa	Predicted RBP	9.36	□□□□□ -0.91
SFI1-223	ENST00000484806	GRM4	Q14833	912 aa		9.36	□□□□□ -0.91
SFI1-223	ENST00000484806	SCYL3	Q8IZE3	742 aa		9.36	□□□□□ -0.91
SFI1-223	ENST00000484806	LRRC47	Q8N1G4	583 aa	Known RBP	9.36	□□□□□ -0.91
SFI1-223	ENST00000484806	GMCL1P1	Q8NEA9	526 aa		9.36	□□□□□ -0.91
SFI1-223	ENST00000484806	NKX2-3	Q8TAU0	364 aa		9.36	□□□□□ -0.91
SFI1-223	ENST00000484806	MKL1	Q969V6	931 aa		9.36	□□□□□ -0.91
SFI1-223	ENST00000484806	CDCA5	Q96FF9	252 aa		9.36	□□□□□ -0.91
SFI1-223	ENST00000484806	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	9.36	□□□□□ -0.91
SFI1-223	ENST00000484806	NCOA5	Q9HCD5	579 aa	Known RBP	9.36	□□□□□ -0.91
SFI1-223	ENST00000484806	FOXD4L1	Q9NU39	408 aa		9.36	□□□□□ -0.91
SFI1-223	ENST00000484806	CHMP5	Q9NZZ3	219 aa		9.36	□□□□□ -0.91
SFI1-223	ENST00000484806	ISY1	Q9ULR0	285 aa	Known RBP	9.36	□□□□□ -0.91
SFI1-223	ENST00000484806	SCAF8	Q9UPN6	1271 aa	Known RBP	9.36	□□□□□ -0.91
SFI1-223	ENST00000484806	HPS5	Q9UPZ3	1129 aa		9.36	□□□□□ -0.91
SFI1-223	ENST00000484806	PAPPA2	Q9BXP8	1791 aa		9.36	□□□□□ -0.91
SFI1-223	ENST00000484806	SSC5D	A1L4H1	1573 aa		9.35	□□□□□ -0.91
SFI1-223	ENST00000484806	RAD21	O60216	631 aa		9.35	□□□□□ -0.91
SFI1-223	ENST00000484806	EEF2	P13639	858 aa	Known RBP	9.35	□□□□□ -0.91
SFI1-223	ENST00000484806	RXRA	P19793	462 aa		9.35	□□□□□ -0.91
SFI1-223	ENST00000484806	FKBP1B	P68106	108 aa		9.35	□□□□□ -0.91
SFI1-223	ENST00000484806	MAP3K9	P80192	1104 aa		9.35	□□□□□ -0.91
SFI1-223	ENST00000484806	CCDC96	Q2M329	555 aa		9.35	□□□□□ -0.91
SFI1-223	ENST00000484806	TMTC3	Q6ZXV5	915 aa		9.35	□□□□□ -0.91
SFI1-223	ENST00000484806	RAB11FIP4	Q86YS3	637 aa		9.35	□□□□□ -0.91
SFI1-223	ENST00000484806	CDAN1	Q8IWY9	1227 aa		9.35	□□□□□ -0.91
SFI1-223	ENST00000484806	CCDC144CP	Q8IYA2	1237 aa		9.35	□□□□□ -0.91
SFI1-223	ENST00000484806	RGS22	Q8NE09	1264 aa		9.35	□□□□□ -0.91
SFI1-223	ENST00000484806	NSUN7	Q8NE18	718 aa	Known RBP	9.35	□□□□□ -0.91
SFI1-223	ENST00000484806	SMARCC2	Q8TAQ2	1214 aa		9.35	□□□□□ -0.91
SFI1-223	ENST00000484806	ZNF526	Q8TF50	670 aa	Predicted RBP	9.35	□□□□□ -0.91
SFI1-223	ENST00000484806	KLRG1	Q96E93	195 aa		9.35	□□□□□ -0.91
SFI1-223	ENST00000484806	GMCL1	Q96IK5	515 aa		9.35	□□□□□ -0.91
SFI1-223	ENST00000484806	TRPM7	Q96QT4	1865 aa		9.35	□□□□□ -0.91
SFI1-223	ENST00000484806	MYL10	Q9BUA6	226 aa		9.35	□□□□□ -0.91
SFI1-223	ENST00000484806	RNF26	Q9BY78	433 aa	Predicted RBP	9.35	□□□□□ -0.91
SFI1-223	ENST00000484806	GLIS2	Q9BZE0	524 aa	Predicted RBP	9.35	□□□□□ -0.91
SFI1-223	ENST00000484806	GPBP1L1	Q9HC44	474 aa	Predicted RBP	9.35	□□□□□ -0.91
SFI1-223	ENST00000484806	SENP2	Q9HC62	589 aa		9.35	□□□□□ -0.91
SFI1-223	ENST00000484806	OTOF	Q9HC10	1997 aa		9.35	□□□□□ -0.91
SFI1-223	ENST00000484806	WDR33	Q9C0J8	1336 aa	Known RBP	9.34	□□□□□ -0.91
SFI1-223	ENST00000484806		H3BQV1	296 aa		9.34	□□□□□ -0.91
SFI1-223	ENST00000484806	DEXI	O95424	95 aa		9.34	□□□□□ -0.91
SFI1-223	ENST00000484806	FMNL1	O95466	1100 aa	Predicted RBP	9.34	□□□□□ -0.91
SFI1-223	ENST00000484806	SNHG28	P0DPA3	235 aa		9.34	□□□□□ -0.91
SFI1-223	ENST00000484806	PDHB	P11177	359 aa		9.34	□□□□□ -0.91
SFI1-223	ENST00000484806	SMARCA1	P28370	1054 aa		9.34	□□□□□ -0.91
SFI1-223	ENST00000484806	CDC27	P30260	824 aa		9.34	□□□□□ -0.91
SFI1-223	ENST00000484806	GUCY1A2	P33402	732 aa		9.34	□□□□□ -0.91
SFI1-223	ENST00000484806	ADD1	P35611	737 aa	Known RBP	9.34	□□□□□ -0.91
SFI1-223	ENST00000484806	SLC1A4	P43007	532 aa		9.34	□□□□□ -0.91
SFI1-223	ENST00000484806	TRIM29	Q14134	588 aa		9.34	□□□□□ -0.91
SFI1-223	ENST00000484806	MAP3K11	Q16584	847 aa		9.34	□□□□□ -0.91
SFI1-223	ENST00000484806	IFFO2	Q5TF58	517 aa		9.34	□□□□□ -0.91
SFI1-223	ENST00000484806	PRAMEF18	Q5VWM3	479 aa		9.34	□□□□□ -0.91
SFI1-223	ENST00000484806	SLFN13	Q68D06	897 aa		9.34	□□□□□ -0.91
SFI1-223	ENST00000484806	CHADL	Q6NUI6	762 aa		9.34	□□□□□ -0.91
SFI1-223	ENST00000484806	ANKRD13A	Q8IZ07	590 aa		9.34	□□□□□ -0.91
SFI1-223	ENST00000484806	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	9.34	□□□□□ -0.91
SFI1-223	ENST00000484806	LPAR1	Q92633	364 aa		9.34	□□□□□ -0.91
SFI1-223	ENST00000484806	SPZ1	Q9BXG8	430 aa		9.34	□□□□□ -0.91
SFI1-223	ENST00000484806	SLC26A6	Q9BXS9	759 aa		9.34	□□□□□ -0.91
SFI1-223	ENST00000484806	ORC3	Q9UBD5	711 aa	Predicted RBP	9.34	□□□□□ -0.91
SFI1-223	ENST00000484806	SEC63	Q9UGP8	760 aa	Known RBP	9.34	□□□□□ -0.91
SFI1-223	ENST00000484806	MTMR7	Q9Y216	660 aa		9.34	□□□□□ -0.91
SFI1-223	ENST00000484806	TMX2	Q9Y320	296 aa		9.34	□□□□□ -0.91
SFI1-223	ENST00000484806	PALM3	A6NDB9	673 aa	Predicted RBP	9.33	□□□□□ -0.92
SFI1-223	ENST00000484806	USP17L10	C9JJH3	530 aa		9.33	□□□□□ -0.92
SFI1-223	ENST00000484806	KLRF2	D3W0D1	207 aa		9.33	□□□□□ -0.92
SFI1-223	ENST00000484806	JAK2	O60674	1132 aa		9.33	□□□□□ -0.92
SFI1-223	ENST00000484806	USP2	O75604	605 aa	Predicted RBP	9.33	□□□□□ -0.92
SFI1-223	ENST00000484806	SLURP2	P0DP57	97 aa		9.33	□□□□□ -0.92
SFI1-223	ENST00000484806	INPP5B	P32019	993 aa		9.33	□□□□□ -0.92
SFI1-223	ENST00000484806	ST3GAL1	Q11201	340 aa		9.33	□□□□□ -0.92
SFI1-223	ENST00000484806	TRAF1	Q13077	416 aa		9.33	□□□□□ -0.92
SFI1-223	ENST00000484806	IK	Q13123	557 aa	Predicted RBP	9.33	□□□□□ -0.92
SFI1-223	ENST00000484806	LARP1B	Q659C4	914 aa	Known RBP	9.33	□□□□□ -0.92
SFI1-223	ENST00000484806	MAP1S	Q66K74	1059 aa	Predicted RBP	9.33	□□□□□ -0.92
SFI1-223	ENST00000484806	CLEC10A	Q8IUN9	316 aa		9.33	□□□□□ -0.92
SFI1-223	ENST00000484806	FAM177A1	Q8N128	213 aa	Predicted RBP	9.33	□□□□□ -0.92
SFI1-223	ENST00000484806	C2orf69	Q8N8R5	385 aa		9.33	□□□□□ -0.92
SFI1-223	ENST00000484806	ZNF280C	Q8ND82	737 aa		9.33	□□□□□ -0.92
SFI1-223	ENST00000484806	RBM46	Q8TBY0	533 aa	Known RBP	9.33	□□□□□ -0.92
SFI1-223	ENST00000484806	CCDC12	Q8WUD4	166 aa	Predicted RBP	9.33	□□□□□ -0.92
SFI1-223	ENST00000484806	DDX11	Q96FC9	970 aa		9.33	□□□□□ -0.92
SFI1-223	ENST00000484806	WDR18	Q9BV38	432 aa		9.33	□□□□□ -0.92
SFI1-223	ENST00000484806	KIAA1683	Q9H0B3	1180 aa		9.33	□□□□□ -0.92
SFI1-223	ENST00000484806	VCPKMT	Q9H867	229 aa		9.33	□□□□□ -0.92
SFI1-223	ENST00000484806	NMRK2	Q9NPI5	230 aa		9.33	□□□□□ -0.92
SFI1-223	ENST00000484806	MAD2L2	Q9UI95	211 aa		9.33	□□□□□ -0.92
SFI1-223	ENST00000484806	CNTNAP5	Q8WYK1	1306 aa		9.32	□□□□□ -0.92
SFI1-223	ENST00000484806	BAZ2B	Q9UIF8	2168 aa	Known RBP	9.32	□□□□□ -0.92
SFI1-223	ENST00000484806	C19orf81	C9J6K1	198 aa		9.32	□□□□□ -0.92
SFI1-223	ENST00000484806		F5H6K3	240 aa		9.32	□□□□□ -0.92
SFI1-223	ENST00000484806	hCG_1984214	I3L0E3	225 aa		9.32	□□□□□ -0.92
SFI1-223	ENST00000484806	WDR46	O15213	610 aa	Known RBP	9.32	□□□□□ -0.92

Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms