RNA–Protein interactions for RNA: ENST00000484767.5

SND1-211, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-211ENST00000484767 RPGRIP1Q96KN7 1286 aa10.41□□□□□ -0.74
SND1-211ENST00000484767 MED15Q96RN5 788 aa10.41□□□□□ -0.74
SND1-211ENST00000484767 NAPGQ99747 312 aaPredicted RBP10.41□□□□□ -0.74
SND1-211ENST00000484767 UBAC1Q9BSL1 405 aa10.41□□□□□ -0.74
SND1-211ENST00000484767 ST7Q9NRC1 585 aa10.41□□□□□ -0.74
SND1-211ENST00000484767 SAMSN1Q9NSI8 373 aaKnown RBP10.41□□□□□ -0.74
SND1-211ENST00000484767 TRMT112Q9UI30 125 aaKnown RBP10.41□□□□□ -0.74
SND1-211ENST00000484767 RWDD2AQ9UIY3 292 aa10.41□□□□□ -0.74
SND1-211ENST00000484767 DENND2AQ9ULE3 1009 aa10.41□□□□□ -0.74
SND1-211ENST00000484767 SLC4A4Q9Y6R1 1079 aa10.41□□□□□ -0.74
SND1-211ENST00000484767 SRCAPQ6ZRS2 3230 aa10.41□□□□□ -0.74
SND1-211ENST00000484767 SOS2Q07890 1332 aaPredicted RBP10.4□□□□□ -0.74
SND1-211ENST00000484767 PPP1R3GB7ZBB8 358 aa10.4□□□□□ -0.74
SND1-211ENST00000484767 GTPBP6O43824 516 aaPredicted RBP10.4□□□□□ -0.74
SND1-211ENST00000484767 SASH3O75995 380 aa10.4□□□□□ -0.74
SND1-211ENST00000484767 SEC31AO94979 1220 aaKnown RBP10.4□□□□□ -0.74
SND1-211ENST00000484767 MYL1P05976 194 aa10.4□□□□□ -0.74
SND1-211ENST00000484767 IVLP07476 585 aa10.4□□□□□ -0.74
SND1-211ENST00000484767 FGRP09769 529 aa10.4□□□□□ -0.74
SND1-211ENST00000484767 IL6STP40189 918 aaPredicted RBP10.4□□□□□ -0.74
SND1-211ENST00000484767 HNRNPH2P55795 449 aaKnown RBP10.4□□□□□ -0.74
SND1-211ENST00000484767 PPARAQ07869 468 aa10.4□□□□□ -0.74
SND1-211ENST00000484767 RBL2Q08999 1139 aa10.4□□□□□ -0.74
SND1-211ENST00000484767 GOLGA8FQ08AF8 430 aa10.4□□□□□ -0.74
SND1-211ENST00000484767 GOLGA8DPQ0D2H9 430 aa10.4□□□□□ -0.74
SND1-211ENST00000484767 RAD9BQ6WBX8 426 aa10.4□□□□□ -0.74
SND1-211ENST00000484767 IQCDQ96DY2 449 aa10.4□□□□□ -0.74
SND1-211ENST00000484767 MYL10Q9BUA6 226 aa10.4□□□□□ -0.74
SND1-211ENST00000484767 ARMT1Q9H993 441 aa10.4□□□□□ -0.74
SND1-211ENST00000484767 VIPAS39Q9H9C1 493 aa10.4□□□□□ -0.74
SND1-211ENST00000484767 MRPL44Q9H9J2 332 aaKnown RBP10.4□□□□□ -0.74
SND1-211ENST00000484767 CABP5Q9NP86 173 aa10.4□□□□□ -0.74
SND1-211ENST00000484767 KCNJ14Q9UNX9 436 aa10.4□□□□□ -0.74
SND1-211ENST00000484767 SCN7AQ01118 1682 aa10.4□□□□□ -0.74
SND1-211ENST00000484767 MYH1P12882 1939 aa10.39□□□□□ -0.75
SND1-211ENST00000484767 A0A1W2PQC6 194 aa10.39□□□□□ -0.75
SND1-211ENST00000484767 CTAGE15A4D2H0 777 aa10.39□□□□□ -0.75
SND1-211ENST00000484767 ERICH4A6NGS2 130 aa10.39□□□□□ -0.75
SND1-211ENST00000484767 CTAGE8P0CG41 777 aa10.39□□□□□ -0.75
SND1-211ENST00000484767 CYP19A1P11511 503 aaPredicted RBP10.39□□□□□ -0.75
SND1-211ENST00000484767 HOXA7P31268 230 aaPredicted RBP10.39□□□□□ -0.75
SND1-211ENST00000484767 GUCY1A2P33402 732 aa10.39□□□□□ -0.75
SND1-211ENST00000484767 ATP2C1P98194 919 aaPredicted RBP10.39□□□□□ -0.75
SND1-211ENST00000484767 GRIN1Q05586 938 aa10.39□□□□□ -0.75
SND1-211ENST00000484767 RASGRF1Q13972 1273 aa10.39□□□□□ -0.75
SND1-211ENST00000484767 KARSQ15046 597 aaKnown RBP10.39□□□□□ -0.75
SND1-211ENST00000484767 KIF4BQ2VIQ3 1234 aa10.39□□□□□ -0.75
SND1-211ENST00000484767 BEND6Q5SZJ8 279 aaPredicted RBP10.39□□□□□ -0.75
SND1-211ENST00000484767 ARL6IP4Q66PJ3 421 aaKnown RBP10.39□□□□□ -0.75
SND1-211ENST00000484767 WDR93Q6P2C0 686 aa10.39□□□□□ -0.75
SND1-211ENST00000484767 CATIPQ7Z7H3 387 aa10.39□□□□□ -0.75
SND1-211ENST00000484767 CTAGE6Q86UF2 777 aa10.39□□□□□ -0.75
SND1-211ENST00000484767 CTAGE4Q8IX94 777 aa10.39□□□□□ -0.75
SND1-211ENST00000484767 TRMT44Q8IYL2 757 aaKnown RBP10.39□□□□□ -0.75
SND1-211ENST00000484767 EHBP1Q8NDI1 1231 aa10.39□□□□□ -0.75
SND1-211ENST00000484767 NKX2-3Q8TAU0 364 aa10.39□□□□□ -0.75
SND1-211ENST00000484767 FAM71BQ8TC56 605 aa10.39□□□□□ -0.75
SND1-211ENST00000484767 NOC3LQ8WTT2 800 aaKnown RBP10.39□□□□□ -0.75
SND1-211ENST00000484767 RUBCNQ92622 972 aa10.39□□□□□ -0.75
SND1-211ENST00000484767 CDC5LQ99459 802 aaKnown RBP10.39□□□□□ -0.75
SND1-211ENST00000484767 BRIP1Q9BX63 1249 aa10.39□□□□□ -0.75
SND1-211ENST00000484767 ANKZF1Q9H8Y5 726 aa10.39□□□□□ -0.75
SND1-211ENST00000484767 MED4Q9NPJ6 270 aa10.39□□□□□ -0.75
SND1-211ENST00000484767 BCL9O00512 1426 aa10.39□□□□□ -0.75
SND1-211ENST00000484767 COL14A1Q05707 1796 aaKnown RBP10.39□□□□□ -0.75
SND1-211ENST00000484767 CASZ1Q86V15 1759 aa10.39□□□□□ -0.75
SND1-211ENST00000484767 CACNA1SQ13698 1873 aa10.38□□□□□ -0.75
SND1-211ENST00000484767 CCDC88AQ3V6T2 1871 aa10.38□□□□□ -0.75
SND1-211ENST00000484767 SOWAHDA6NJG2 315 aa10.38□□□□□ -0.75
SND1-211ENST00000484767 H7C1D1 291 aa10.38□□□□□ -0.75
SND1-211ENST00000484767 POLR3GO15318 223 aaPredicted RBP10.38□□□□□ -0.75
SND1-211ENST00000484767 TEX33O43247 280 aa10.38□□□□□ -0.75
SND1-211ENST00000484767 PRKAR2AP13861 404 aaKnown RBP10.38□□□□□ -0.75
SND1-211ENST00000484767 PPP1R2P41236 205 aa10.38□□□□□ -0.75
SND1-211ENST00000484767 COPB1P53618 953 aaKnown RBP10.38□□□□□ -0.75
SND1-211ENST00000484767 FUT2Q10981 343 aa10.38□□□□□ -0.75
SND1-211ENST00000484767 NR5A1Q13285 461 aa10.38□□□□□ -0.75
SND1-211ENST00000484767 E2F4Q16254 413 aa10.38□□□□□ -0.75
SND1-211ENST00000484767 PKN1Q16512 942 aa10.38□□□□□ -0.75
SND1-211ENST00000484767 HLFQ16534 295 aa10.38□□□□□ -0.75
SND1-211ENST00000484767 MAP9Q49MG5 647 aa10.38□□□□□ -0.75
SND1-211ENST00000484767 PARP10Q53GL7 1025 aa10.38□□□□□ -0.75
SND1-211ENST00000484767 SPECC1Q5M775 1068 aa10.38□□□□□ -0.75
SND1-211ENST00000484767 ZNF569Q5MCW4 686 aa10.38□□□□□ -0.75
SND1-211ENST00000484767 TTC38Q5R3I4 469 aa10.38□□□□□ -0.75
SND1-211ENST00000484767 ZNF658Q5TYW1 1059 aaPredicted RBP10.38□□□□□ -0.75
SND1-211ENST00000484767 LCORLQ8N3X6 602 aa10.38□□□□□ -0.75
SND1-211ENST00000484767 CTCFLQ8NI51 663 aaPredicted RBP10.38□□□□□ -0.75
SND1-211ENST00000484767 SYMPKQ92797 1274 aaKnown RBP10.38□□□□□ -0.75
SND1-211ENST00000484767 UPF1Q92900 1129 aaKnown RBP eCLIP10.38□□□□□ -0.75
SND1-211ENST00000484767 TNFRSF25Q93038 417 aa10.38□□□□□ -0.75
SND1-211ENST00000484767 CCDC85AQ96PX6 553 aaPredicted RBP10.38□□□□□ -0.75
SND1-211ENST00000484767 ZSCAN10Q96SZ4 725 aaPredicted RBP10.38□□□□□ -0.75
SND1-211ENST00000484767 DESI2Q9BSY9 194 aa10.38□□□□□ -0.75
SND1-211ENST00000484767 HAUS4Q9H6D7 363 aa10.38□□□□□ -0.75
SND1-211ENST00000484767 CREBZFQ9NS37 354 aa10.38□□□□□ -0.75
SND1-211ENST00000484767 ABHD10Q9NUJ1 306 aa10.38□□□□□ -0.75
SND1-211ENST00000484767 L1RE1Q9UN81 338 aa10.38□□□□□ -0.75
SND1-211ENST00000484767 TACC3Q9Y6A5 838 aa10.38□□□□□ -0.75
SND1-211ENST00000484767 TNKSO95271 1327 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms