RNA–Protein interactions for RNA: ENST00000484729.2

HLA-DQB1-208, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-208ENST00000484729 FOSL2P15408 326 aa18.64■□□□□ 0.57
HLA-DQB1-208ENST00000484729 SMAD3P84022 425 aaKnown RBP18.64■□□□□ 0.57
HLA-DQB1-208ENST00000484729 DPP9Q86TI2 863 aa18.64■□□□□ 0.57
HLA-DQB1-208ENST00000484729 FERMT2Q96AC1 680 aa18.64■□□□□ 0.57
HLA-DQB1-208ENST00000484729 TRIM43Q96BQ3 446 aaPredicted RBP18.64■□□□□ 0.57
HLA-DQB1-208ENST00000484729 KIAA1683Q9H0B3 1180 aa18.64■□□□□ 0.57
HLA-DQB1-208ENST00000484729 RPAP3Q9H6T3 665 aaPredicted RBP18.64■□□□□ 0.57
HLA-DQB1-208ENST00000484729 PDLIM7Q9NR12 457 aa18.64■□□□□ 0.57
HLA-DQB1-208ENST00000484729 MYO5AQ9Y4I1 1855 aaKnown RBP18.64■□□□□ 0.57
HLA-DQB1-208ENST00000484729 ADORA2AP29274 412 aa18.63■□□□□ 0.57
HLA-DQB1-208ENST00000484729 ADCYAP1R1P41586 468 aa18.63■□□□□ 0.57
HLA-DQB1-208ENST00000484729 PRAMEF19Q5SWL8 479 aa18.63■□□□□ 0.57
HLA-DQB1-208ENST00000484729 LBX2Q6XYB7 198 aa18.63■□□□□ 0.57
HLA-DQB1-208ENST00000484729 AACSQ86V21 672 aa18.63■□□□□ 0.57
HLA-DQB1-208ENST00000484729 ERC1Q8IUD2 1116 aa18.63■□□□□ 0.57
HLA-DQB1-208ENST00000484729 MIGA1Q8NAN2 632 aa18.63■□□□□ 0.57
HLA-DQB1-208ENST00000484729 CDH23Q9H251 3354 aa18.63■□□□□ 0.57
HLA-DQB1-208ENST00000484729 USP5P45974 858 aa18.62■□□□□ 0.57
HLA-DQB1-208ENST00000484729 USP14P54578 494 aa18.62■□□□□ 0.57
HLA-DQB1-208ENST00000484729 ABCB5Q2M3G0 1257 aa18.62■□□□□ 0.57
HLA-DQB1-208ENST00000484729 CERKLQ49MI3 558 aaPredicted RBP18.62■□□□□ 0.57
HLA-DQB1-208ENST00000484729 MAGEB6Q8N7X4 407 aa18.62■□□□□ 0.57
HLA-DQB1-208ENST00000484729 MOV10L1Q9BXT6 1211 aaKnown RBP18.62■□□□□ 0.57
HLA-DQB1-208ENST00000484729 COBLO75128 1261 aa18.61■□□□□ 0.57
HLA-DQB1-208ENST00000484729 SNX17Q15036 470 aa18.61■□□□□ 0.57
HLA-DQB1-208ENST00000484729 IL1RAPL2Q9NP60 686 aa18.61■□□□□ 0.57
HLA-DQB1-208ENST00000484729 SERPINB13Q9UIV8 391 aa18.61■□□□□ 0.57
HLA-DQB1-208ENST00000484729 MYH1P12882 1939 aa18.61■□□□□ 0.57
HLA-DQB1-208ENST00000484729 SEPT4O43236 478 aa18.6■□□□□ 0.57
HLA-DQB1-208ENST00000484729 ITGB8P26012 769 aa18.6■□□□□ 0.57
HLA-DQB1-208ENST00000484729 GUCY1A2P33402 732 aa18.6■□□□□ 0.57
HLA-DQB1-208ENST00000484729 EPHB4P54760 987 aa18.6■□□□□ 0.57
HLA-DQB1-208ENST00000484729 TLE2Q04725 743 aa18.6■□□□□ 0.57
HLA-DQB1-208ENST00000484729 MAP3K12Q12852 859 aa18.6■□□□□ 0.57
HLA-DQB1-208ENST00000484729 LRRC41Q15345 812 aa18.6■□□□□ 0.57
HLA-DQB1-208ENST00000484729 HSP90AB4PQ58FF6 505 aa18.6■□□□□ 0.57
HLA-DQB1-208ENST00000484729 OLFML2BQ68BL8 750 aa18.6■□□□□ 0.57
HLA-DQB1-208ENST00000484729 ANTXR1Q9H6X2 564 aa18.6■□□□□ 0.57
HLA-DQB1-208ENST00000484729 MS4A1P11836 297 aa18.59■□□□□ 0.57
HLA-DQB1-208ENST00000484729 FAM47AQ5JRC9 791 aa18.59■□□□□ 0.57
HLA-DQB1-208ENST00000484729 CERS3Q8IU89 383 aa18.59■□□□□ 0.57
HLA-DQB1-208ENST00000484729 RNPC3Q96LT9 517 aaKnown RBP18.59■□□□□ 0.57
HLA-DQB1-208ENST00000484729 EHD4Q9H223 541 aa18.59■□□□□ 0.57
HLA-DQB1-208ENST00000484729 CABP5Q9NP86 173 aa18.59■□□□□ 0.57
HLA-DQB1-208ENST00000484729 APBB1O00213 710 aa18.58■□□□□ 0.56
HLA-DQB1-208ENST00000484729 ERCC3P19447 782 aa18.58■□□□□ 0.56
HLA-DQB1-208ENST00000484729 SHMT1P34896 483 aa18.58■□□□□ 0.56
HLA-DQB1-208ENST00000484729 PLCD1P51178 756 aa18.58■□□□□ 0.56
HLA-DQB1-208ENST00000484729 SEPT2Q15019 361 aa18.58■□□□□ 0.56
HLA-DQB1-208ENST00000484729 USP38Q8NB14 1042 aa18.58■□□□□ 0.56
HLA-DQB1-208ENST00000484729 SYMPKQ92797 1274 aaKnown RBP18.58■□□□□ 0.56
HLA-DQB1-208ENST00000484729 SPATC1LQ9H0A9 340 aa18.58■□□□□ 0.56
HLA-DQB1-208ENST00000484729 BCL11AQ9H165 835 aa18.58■□□□□ 0.56
HLA-DQB1-208ENST00000484729 A0A1W2PRG0 241 aa18.57■□□□□ 0.56
HLA-DQB1-208ENST00000484729 STRNO43815 780 aa18.57■□□□□ 0.56
HLA-DQB1-208ENST00000484729 EVX2Q03828 476 aa18.57■□□□□ 0.56
HLA-DQB1-208ENST00000484729 COG2Q14746 738 aa18.57■□□□□ 0.56
HLA-DQB1-208ENST00000484729 GRIN2CQ14957 1233 aa18.57■□□□□ 0.56
HLA-DQB1-208ENST00000484729 TTC6Q86TZ1 520 aa18.57■□□□□ 0.56
HLA-DQB1-208ENST00000484729 RHPN1Q8TCX5 695 aa18.57■□□□□ 0.56
HLA-DQB1-208ENST00000484729 TANGO6Q9C0B7 1094 aa18.57■□□□□ 0.56
HLA-DQB1-208ENST00000484729 ZNF236Q9UL36 1845 aa18.56■□□□□ 0.56
HLA-DQB1-208ENST00000484729 PLS1Q14651 629 aa18.56■□□□□ 0.56
HLA-DQB1-208ENST00000484729 KIAA1755Q5JYT7 1200 aa18.56■□□□□ 0.56
HLA-DQB1-208ENST00000484729 HOXC10Q9NYD6 342 aa18.56■□□□□ 0.56
HLA-DQB1-208ENST00000484729 COG6Q9Y2V7 657 aa18.56■□□□□ 0.56
HLA-DQB1-208ENST00000484729 MPHOSPH10O00566 681 aaKnown RBP18.55■□□□□ 0.56
HLA-DQB1-208ENST00000484729 HMMRO75330 724 aa18.55■□□□□ 0.56
HLA-DQB1-208ENST00000484729 COL9A1P20849 921 aa18.55■□□□□ 0.56
HLA-DQB1-208ENST00000484729 TTF1Q15361 905 aaPredicted RBP18.55■□□□□ 0.56
HLA-DQB1-208ENST00000484729 C1orf53Q5VUE5 145 aa18.55■□□□□ 0.56
HLA-DQB1-208ENST00000484729 TMED8Q6PL24 325 aaPredicted RBP18.55■□□□□ 0.56
HLA-DQB1-208ENST00000484729 NCAPG2Q86XI2 1143 aa18.55■□□□□ 0.56
HLA-DQB1-208ENST00000484729 CLASRPQ8N2M8 674 aaKnown RBP18.55■□□□□ 0.56
HLA-DQB1-208ENST00000484729 SHCBP1Q8NEM2 672 aa18.55■□□□□ 0.56
HLA-DQB1-208ENST00000484729 KIF1BPQ96EK5 621 aa18.55■□□□□ 0.56
HLA-DQB1-208ENST00000484729 DNAJC2Q99543 621 aaKnown RBP18.55■□□□□ 0.56
HLA-DQB1-208ENST00000484729 DDX19BQ9UMR2 479 aa18.55■□□□□ 0.56
HLA-DQB1-208ENST00000484729 TACC3Q9Y6A5 838 aa18.55■□□□□ 0.56
HLA-DQB1-208ENST00000484729 MAGEB6P1A0A0J9YX57 407 aa18.54■□□□□ 0.56
HLA-DQB1-208ENST00000484729 PQBP1O60828 265 aaKnown RBP18.54■□□□□ 0.56
HLA-DQB1-208ENST00000484729 PGK1P00558 417 aa18.54■□□□□ 0.56
HLA-DQB1-208ENST00000484729 CLTBP09497 229 aa18.54■□□□□ 0.56
HLA-DQB1-208ENST00000484729 SAMD1Q6SPF0 538 aaPredicted RBP18.54■□□□□ 0.56
HLA-DQB1-208ENST00000484729 RPAP2Q8IXW5 612 aaPredicted RBP18.54■□□□□ 0.56
HLA-DQB1-208ENST00000484729 MAML3Q96JK9 1138 aa18.54■□□□□ 0.56
HLA-DQB1-208ENST00000484729 RIOK1Q9BRS2 568 aaKnown RBP18.54■□□□□ 0.56
HLA-DQB1-208ENST00000484729 XPNPEP3Q9NQH7 507 aa18.54■□□□□ 0.56
HLA-DQB1-208ENST00000484729 RAPGEFL1Q9UHV5 662 aa18.54■□□□□ 0.56
HLA-DQB1-208ENST00000484729 PHF24Q9UPV7 400 aa18.54■□□□□ 0.56
HLA-DQB1-208ENST00000484729 TMEM265A0A087WTH1 108 aa18.53■□□□□ 0.56
HLA-DQB1-208ENST00000484729 POLR3DP05423 398 aaPredicted RBP18.53■□□□□ 0.56
HLA-DQB1-208ENST00000484729 IFIT2P09913 472 aaKnown RBP18.53■□□□□ 0.56
HLA-DQB1-208ENST00000484729 RAG1P15918 1043 aa18.53■□□□□ 0.56
HLA-DQB1-208ENST00000484729 PDE6AP16499 860 aa18.53■□□□□ 0.56
HLA-DQB1-208ENST00000484729 DNAJB2P25686 324 aa18.53■□□□□ 0.56
HLA-DQB1-208ENST00000484729 TJAP1Q5JTD0 557 aa18.53■□□□□ 0.56
HLA-DQB1-208ENST00000484729 ATG4CQ96DT6 458 aa18.53■□□□□ 0.56
HLA-DQB1-208ENST00000484729 MROH8Q9H579 483 aa18.53■□□□□ 0.56
HLA-DQB1-208ENST00000484729 SLC5A4Q9NY91 659 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms