RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 NOM1Q5C9Z4 860 aaKnown RBP22.32■■□□□ 1.16
RPUSD3-216ENST00000484134 TRAPPC11Q7Z392 1133 aa22.32■■□□□ 1.16
RPUSD3-216ENST00000484134 RIN2Q8WYP3 895 aaPredicted RBP22.32■■□□□ 1.16
RPUSD3-216ENST00000484134 COL18A1P39060 1754 aa22.32■■□□□ 1.16
RPUSD3-216ENST00000484134 GSG1L2A8MUP6 293 aa22.32■■□□□ 1.16
RPUSD3-216ENST00000484134 TUBBP07437 444 aa22.32■■□□□ 1.16
RPUSD3-216ENST00000484134 ITGA6P23229 1130 aa22.32■■□□□ 1.16
RPUSD3-216ENST00000484134 KRT9P35527 623 aa22.32■■□□□ 1.16
RPUSD3-216ENST00000484134 WTAPQ15007 396 aa22.32■■□□□ 1.16
RPUSD3-216ENST00000484134 MFSD6Q6ZSS7 791 aa22.32■■□□□ 1.16
RPUSD3-216ENST00000484134 FANCBQ8NB91 859 aa22.32■■□□□ 1.16
RPUSD3-216ENST00000484134 NUP133Q8WUM0 1156 aa22.32■■□□□ 1.16
RPUSD3-216ENST00000484134 MMS19Q96T76 1030 aa22.32■■□□□ 1.16
RPUSD3-216ENST00000484134 BLZF1Q9H2G9 400 aa22.32■■□□□ 1.16
RPUSD3-216ENST00000484134 BCL9LQ86UU0 1499 aa22.31■■□□□ 1.16
RPUSD3-216ENST00000484134 COPB1P53618 953 aaKnown RBP22.31■■□□□ 1.16
RPUSD3-216ENST00000484134 TOMM22Q9NS69 142 aa22.31■■□□□ 1.16
RPUSD3-216ENST00000484134 CHD4Q14839 1912 aa22.31■■□□□ 1.16
RPUSD3-216ENST00000484134 hCG_1642624A0A1W2PR95 340 aa22.31■■□□□ 1.16
RPUSD3-216ENST00000484134 SRGAP2O75044 1071 aa22.31■■□□□ 1.16
RPUSD3-216ENST00000484134 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.31■■□□□ 1.16
RPUSD3-216ENST00000484134 CCDC148Q8NFR7 591 aa22.31■■□□□ 1.16
RPUSD3-216ENST00000484134 GDAP1L1Q96MZ0 367 aa22.31■■□□□ 1.16
RPUSD3-216ENST00000484134 VPS54Q9P1Q0 977 aa22.31■■□□□ 1.16
RPUSD3-216ENST00000484134 HPCAL4Q9UM19 191 aa22.31■■□□□ 1.16
RPUSD3-216ENST00000484134 KCPQ6ZWJ8 1503 aa22.31■■□□□ 1.16
RPUSD3-216ENST00000484134 XDHP47989 1333 aa22.3■■□□□ 1.16
RPUSD3-216ENST00000484134 ZBTB38Q8NAP3 1195 aaPredicted RBP22.3■■□□□ 1.16
RPUSD3-216ENST00000484134 VIPAS39Q9H9C1 493 aa22.3■■□□□ 1.16
RPUSD3-216ENST00000484134 EPN1Q9Y6I3 576 aaPredicted RBP22.3■■□□□ 1.16
RPUSD3-216ENST00000484134 PARP4Q9UKK3 1724 aaKnown RBP22.3■■□□□ 1.16
RPUSD3-216ENST00000484134 ZMYND10O75800 440 aa22.3■■□□□ 1.16
RPUSD3-216ENST00000484134 TRIM28Q13263 835 aaKnown RBP22.3■■□□□ 1.16
RPUSD3-216ENST00000484134 MAGEB6Q8N7X4 407 aa22.3■■□□□ 1.16
RPUSD3-216ENST00000484134 KRT23Q9C075 422 aa22.3■■□□□ 1.16
RPUSD3-216ENST00000484134 CNNM2Q9H8M5 875 aa22.3■■□□□ 1.16
RPUSD3-216ENST00000484134 CNNM1Q9NRU3 951 aa22.3■■□□□ 1.16
RPUSD3-216ENST00000484134 NDUFA10O95299 355 aa22.29■■□□□ 1.16
RPUSD3-216ENST00000484134 ATP1A1P05023 1023 aaKnown RBP22.29■■□□□ 1.16
RPUSD3-216ENST00000484134 TTC31Q49AM3 519 aaPredicted RBP22.29■■□□□ 1.16
RPUSD3-216ENST00000484134 ZNF654Q8IZM8 581 aa22.29■■□□□ 1.16
RPUSD3-216ENST00000484134 MTRQ99707 1265 aa22.29■■□□□ 1.16
RPUSD3-216ENST00000484134 PPFIA4O75335 1185 aa22.29■■□□□ 1.16
RPUSD3-216ENST00000484134 PRDM1O75626 825 aa22.29■■□□□ 1.16
RPUSD3-216ENST00000484134 ARID4AP29374 1257 aaPredicted RBP22.29■■□□□ 1.16
RPUSD3-216ENST00000484134 RRAGBQ5VZM2 374 aa22.29■■□□□ 1.16
RPUSD3-216ENST00000484134 GOLGA6L1Q8N7Z2 621 aa22.29■■□□□ 1.16
RPUSD3-216ENST00000484134 AFAP1L1Q8TED9 768 aa22.29■■□□□ 1.16
RPUSD3-216ENST00000484134 ACBD3Q9H3P7 528 aa22.29■■□□□ 1.16
RPUSD3-216ENST00000484134 ZNF174Q15697 407 aa22.28■■□□□ 1.16
RPUSD3-216ENST00000484134 PKN1Q16512 942 aa22.28■■□□□ 1.16
RPUSD3-216ENST00000484134 SKIDA1Q1XH10 827 aa22.28■■□□□ 1.16
RPUSD3-216ENST00000484134 TCP11X2Q5H9J9 407 aa22.28■■□□□ 1.16
RPUSD3-216ENST00000484134 ALS2Q96Q42 1657 aa22.28■■□□□ 1.16
RPUSD3-216ENST00000484134 PSMD14O00487 310 aa22.28■■□□□ 1.16
RPUSD3-216ENST00000484134 PDE8BO95263 885 aa22.28■■□□□ 1.16
RPUSD3-216ENST00000484134 ICE2Q659A1 982 aa22.28■■□□□ 1.16
RPUSD3-216ENST00000484134 HELBQ8NG08 1087 aaPredicted RBP22.28■■□□□ 1.16
RPUSD3-216ENST00000484134 UBR2Q8IWV8 1755 aa22.27■■□□□ 1.16
RPUSD3-216ENST00000484134 KCNJ18B7U540 433 aa22.27■■□□□ 1.16
RPUSD3-216ENST00000484134 MYBL2P10244 700 aa22.27■■□□□ 1.16
RPUSD3-216ENST00000484134 KCNJ12Q14500 433 aa22.27■■□□□ 1.16
RPUSD3-216ENST00000484134 GSPT2Q8IYD1 628 aaKnown RBP22.27■■□□□ 1.16
RPUSD3-216ENST00000484134 STAG1Q8WVM7 1258 aa22.27■■□□□ 1.16
RPUSD3-216ENST00000484134 TTC26A0AVF1 554 aa22.26■■□□□ 1.15
RPUSD3-216ENST00000484134 HERVK_113P62684 666 aa22.26■■□□□ 1.15
RPUSD3-216ENST00000484134 E2F4Q16254 413 aa22.26■■□□□ 1.15
RPUSD3-216ENST00000484134 CTR9Q6PD62 1173 aa22.26■■□□□ 1.15
RPUSD3-216ENST00000484134 RWDD2AQ9UIY3 292 aa22.26■■□□□ 1.15
RPUSD3-216ENST00000484134 MAPK8IP1Q9UQF2 711 aa22.26■■□□□ 1.15
RPUSD3-216ENST00000484134 MYH6P13533 1939 aa22.26■■□□□ 1.15
RPUSD3-216ENST00000484134 CCDC196A0A1B0GTZ2 297 aa22.26■■□□□ 1.15
RPUSD3-216ENST00000484134 SMIM22K7EJ46 135 aa22.26■■□□□ 1.15
RPUSD3-216ENST00000484134 COG1Q8WTW3 980 aa22.26■■□□□ 1.15
RPUSD3-216ENST00000484134 CAPZA3Q96KX2 299 aa22.26■■□□□ 1.15
RPUSD3-216ENST00000484134 CDHR2Q9BYE9 1310 aa22.26■■□□□ 1.15
RPUSD3-216ENST00000484134 SNAP23O00161 211 aa22.25■■□□□ 1.15
RPUSD3-216ENST00000484134 GPTP24298 496 aa22.25■■□□□ 1.15
RPUSD3-216ENST00000484134 GGCXP38435 758 aa22.25■■□□□ 1.15
RPUSD3-216ENST00000484134 SART3Q15020 963 aaKnown RBP22.25■■□□□ 1.15
RPUSD3-216ENST00000484134 IRF2BP1Q8IU81 584 aa22.25■■□□□ 1.15
RPUSD3-216ENST00000484134 LCORLQ8N3X6 602 aa22.25■■□□□ 1.15
RPUSD3-216ENST00000484134 CTCFLQ8NI51 663 aaPredicted RBP22.25■■□□□ 1.15
RPUSD3-216ENST00000484134 PHF20Q9BVI0 1012 aa22.25■■□□□ 1.15
RPUSD3-216ENST00000484134 C1orf167Q5SNV9 1468 aa22.25■■□□□ 1.15
RPUSD3-216ENST00000484134 AGPSO00116 658 aa22.25■■□□□ 1.15
RPUSD3-216ENST00000484134 UBXN1Q04323 297 aa22.25■■□□□ 1.15
RPUSD3-216ENST00000484134 NELFBQ8WX92 580 aa22.25■■□□□ 1.15
RPUSD3-216ENST00000484134 FERMT2Q96AC1 680 aa22.25■■□□□ 1.15
RPUSD3-216ENST00000484134 JRKLQ9Y4A0 524 aa22.25■■□□□ 1.15
RPUSD3-216ENST00000484134 SPATA31A3Q5VYP0 1347 aa22.25■■□□□ 1.15
RPUSD3-216ENST00000484134 PAK1Q13153 545 aa22.24■■□□□ 1.15
RPUSD3-216ENST00000484134 WDR59Q6PJI9 974 aa22.24■■□□□ 1.15
RPUSD3-216ENST00000484134 DNAJC5Q9H3Z4 198 aa22.24■■□□□ 1.15
RPUSD3-216ENST00000484134 SAR1BQ9Y6B6 198 aa22.24■■□□□ 1.15
RPUSD3-216ENST00000484134 KRT2P35908 639 aa22.24■■□□□ 1.15
RPUSD3-216ENST00000484134 TDO2P48775 406 aa22.24■■□□□ 1.15
RPUSD3-216ENST00000484134 STIM1Q13586 685 aa22.24■■□□□ 1.15
RPUSD3-216ENST00000484134 TRIM14Q14142 442 aa22.24■■□□□ 1.15
RPUSD3-216ENST00000484134 PAPD7Q5XG87 772 aaKnown RBP22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms