RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 EFR3BQ9Y2G0 817 aa5.99□□□□□ -1.45
PTCD3-214ENST00000483925 IFRD2Q12894 506 aaPredicted RBP5.98□□□□□ -1.45
PTCD3-214ENST00000483925 RASA3Q14644 834 aa5.98□□□□□ -1.45
PTCD3-214ENST00000483925 FMNL3Q8IVF7 1028 aa5.98□□□□□ -1.45
PTCD3-214ENST00000483925 CCDC146Q8IYE0 955 aa5.98□□□□□ -1.45
PTCD3-214ENST00000483925 STAG1Q8WVM7 1258 aa5.98□□□□□ -1.45
PTCD3-214ENST00000483925 JDP2Q8WYK2 163 aa5.98□□□□□ -1.45
PTCD3-214ENST00000483925 CCDC113Q9H0I3 377 aa5.98□□□□□ -1.45
PTCD3-214ENST00000483925 PRDM10Q9NQV6 1147 aa5.98□□□□□ -1.45
PTCD3-214ENST00000483925 CACNA2D2Q9NY47 1150 aa5.98□□□□□ -1.45
PTCD3-214ENST00000483925 FAM53CQ9NYF3 392 aa5.98□□□□□ -1.45
PTCD3-214ENST00000483925 BCCIPQ9P287 314 aaKnown RBP eCLIP5.98□□□□□ -1.45
PTCD3-214ENST00000483925 PRKAG3Q9UGI9 489 aa5.98□□□□□ -1.45
PTCD3-214ENST00000483925 RLBP1P12271 317 aa5.97□□□□□ -1.45
PTCD3-214ENST00000483925 SOX9P48436 509 aa5.97□□□□□ -1.45
PTCD3-214ENST00000483925 GYS2P54840 703 aa5.97□□□□□ -1.45
PTCD3-214ENST00000483925 ZP2Q05996 745 aa5.97□□□□□ -1.45
PTCD3-214ENST00000483925 IKZF1Q13422 519 aa5.97□□□□□ -1.45
PTCD3-214ENST00000483925 PPM1JQ5JR12 505 aa5.97□□□□□ -1.45
PTCD3-214ENST00000483925 KIAA0907Q7Z7F0 614 aaPredicted RBP5.97□□□□□ -1.45
PTCD3-214ENST00000483925 ZSWIM9Q86XI8 627 aa5.97□□□□□ -1.45
PTCD3-214ENST00000483925 FAM84AQ96KN4 292 aa5.97□□□□□ -1.45
PTCD3-214ENST00000483925 NECAB3Q96P71 396 aaPredicted RBP5.97□□□□□ -1.45
PTCD3-214ENST00000483925 PRDM7Q9NQW5 492 aa5.97□□□□□ -1.45
PTCD3-214ENST00000483925 PICK1Q9NRD5 415 aa5.97□□□□□ -1.45
PTCD3-214ENST00000483925 SAMM50Q9Y512 469 aa5.97□□□□□ -1.45
PTCD3-214ENST00000483925 CSADQ9Y600 493 aa5.97□□□□□ -1.45
PTCD3-214ENST00000483925 MRVI1Q9Y6F6 885 aa5.97□□□□□ -1.45
PTCD3-214ENST00000483925 LRRC10BA6NIK2 292 aa5.96□□□□□ -1.46
PTCD3-214ENST00000483925 PRC1O43663 620 aa5.96□□□□□ -1.46
PTCD3-214ENST00000483925 EIF4A3P38919 411 aaKnown RBP5.96□□□□□ -1.46
PTCD3-214ENST00000483925 TBX4P57082 545 aa5.96□□□□□ -1.46
PTCD3-214ENST00000483925 FBLN7Q53RD9 439 aa5.96□□□□□ -1.46
PTCD3-214ENST00000483925 TNNI3KQ59H18 835 aa5.96□□□□□ -1.46
PTCD3-214ENST00000483925 ODR4Q5SWX8 454 aa5.96□□□□□ -1.46
PTCD3-214ENST00000483925 MPRIPQ6WCQ1 1025 aa5.96□□□□□ -1.46
PTCD3-214ENST00000483925 C16orf86Q6ZW13 317 aa5.96□□□□□ -1.46
PTCD3-214ENST00000483925 FERMT3Q86UX7 667 aa5.96□□□□□ -1.46
PTCD3-214ENST00000483925 SPACA3Q8IXA5 215 aa5.96□□□□□ -1.46
PTCD3-214ENST00000483925 CEP44Q9C0F1 390 aa5.96□□□□□ -1.46
PTCD3-214ENST00000483925 GINM1Q9NU53 330 aa5.96□□□□□ -1.46
PTCD3-214ENST00000483925 GABBR1Q9UBS5 961 aa5.96□□□□□ -1.46
PTCD3-214ENST00000483925 FAM221BA6H8Z2 402 aa5.95□□□□□ -1.46
PTCD3-214ENST00000483925 CCDC85CA6NKD9 419 aa5.95□□□□□ -1.46
PTCD3-214ENST00000483925 GNAT3A8MTJ3 354 aa5.95□□□□□ -1.46
PTCD3-214ENST00000483925 DCDC2CA8MYV0 355 aa5.95□□□□□ -1.46
PTCD3-214ENST00000483925 FANCGO15287 622 aa5.95□□□□□ -1.46
PTCD3-214ENST00000483925 TRIM37O94972 964 aa5.95□□□□□ -1.46
PTCD3-214ENST00000483925 BMP6P22004 513 aa5.95□□□□□ -1.46
PTCD3-214ENST00000483925 GSTT1P30711 240 aa5.95□□□□□ -1.46
PTCD3-214ENST00000483925 NTF4P34130 210 aa5.95□□□□□ -1.46
PTCD3-214ENST00000483925 RING1Q06587 406 aa5.95□□□□□ -1.46
PTCD3-214ENST00000483925 MESP2Q0VG99 397 aa5.95□□□□□ -1.46
PTCD3-214ENST00000483925 KCNMB1Q16558 191 aa5.95□□□□□ -1.46
PTCD3-214ENST00000483925 NKPD1Q17RQ9 610 aa5.95□□□□□ -1.46
PTCD3-214ENST00000483925 CDC37L1Q7L3B6 337 aa5.95□□□□□ -1.46
PTCD3-214ENST00000483925 C12orf40Q86WS4 652 aa5.95□□□□□ -1.46
PTCD3-214ENST00000483925 C3orf58Q8NDZ4 430 aa5.95□□□□□ -1.46
PTCD3-214ENST00000483925 BHLHE22Q8NFJ8 381 aaPredicted RBP5.95□□□□□ -1.46
PTCD3-214ENST00000483925 GRIN3AQ8TCU5 1115 aa5.95□□□□□ -1.46
PTCD3-214ENST00000483925 HNRNPLLQ8WVV9 542 aaKnown RBP5.95□□□□□ -1.46
PTCD3-214ENST00000483925 PMM1Q92871 262 aa5.95□□□□□ -1.46
PTCD3-214ENST00000483925 FEZ1Q99689 392 aa5.95□□□□□ -1.46
PTCD3-214ENST00000483925 NT5C1AQ9BXI3 368 aa5.95□□□□□ -1.46
PTCD3-214ENST00000483925 ADAMTS1Q9UHI8 967 aa5.95□□□□□ -1.46
PTCD3-214ENST00000483925 TCEAL9Q9UHQ7 104 aa5.95□□□□□ -1.46
PTCD3-214ENST00000483925 TTF2Q9UNY4 1162 aaKnown RBP5.95□□□□□ -1.46
PTCD3-214ENST00000483925 ESYT3A0FGR9 886 aa5.94□□□□□ -1.46
PTCD3-214ENST00000483925 ZNF503-AS2A6NEH8 195 aa5.94□□□□□ -1.46
PTCD3-214ENST00000483925 GBP2P32456 591 aaPredicted RBP5.94□□□□□ -1.46
PTCD3-214ENST00000483925 MASP1P48740 699 aa5.94□□□□□ -1.46
PTCD3-214ENST00000483925 CLCN7P51798 805 aa5.94□□□□□ -1.46
PTCD3-214ENST00000483925 BIRC2Q13490 618 aa5.94□□□□□ -1.46
PTCD3-214ENST00000483925 TPTE2Q6XPS3 522 aa5.94□□□□□ -1.46
PTCD3-214ENST00000483925 SPOCD1Q6ZMY3 1216 aa5.94□□□□□ -1.46
PTCD3-214ENST00000483925 KCT2Q8NC54 265 aa5.94□□□□□ -1.46
PTCD3-214ENST00000483925 ZNF296Q8WUU4 475 aaPredicted RBP5.94□□□□□ -1.46
PTCD3-214ENST00000483925 RELTQ969Z4 430 aa5.94□□□□□ -1.46
PTCD3-214ENST00000483925 ANAPC16Q96DE5 110 aa5.94□□□□□ -1.46
PTCD3-214ENST00000483925 C8orf48Q96LL4 319 aa5.94□□□□□ -1.46
PTCD3-214ENST00000483925 TMEM74Q96NL1 305 aa5.94□□□□□ -1.46
PTCD3-214ENST00000483925 DNAJC7Q99615 494 aa5.94□□□□□ -1.46
PTCD3-214ENST00000483925 UBA5Q9GZZ9 404 aa5.94□□□□□ -1.46
PTCD3-214ENST00000483925 HOMER2Q9NSB8 354 aa5.94□□□□□ -1.46
PTCD3-214ENST00000483925 TMEM260Q9NX78 707 aa5.94□□□□□ -1.46
PTCD3-214ENST00000483925 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.94□□□□□ -1.46
PTCD3-214ENST00000483925 LMCD1Q9NZU5 365 aa5.94□□□□□ -1.46
PTCD3-214ENST00000483925 CTNND2Q9UQB3 1225 aa5.94□□□□□ -1.46
PTCD3-214ENST00000483925 MINDY4BA8MYZ0 360 aa5.93□□□□□ -1.46
PTCD3-214ENST00000483925 ENC1O14682 589 aa5.93□□□□□ -1.46
PTCD3-214ENST00000483925 EOMESO95936 686 aa5.93□□□□□ -1.46
PTCD3-214ENST00000483925 AFMP43652 599 aa5.93□□□□□ -1.46
PTCD3-214ENST00000483925 LRRC14Q15048 493 aa5.93□□□□□ -1.46
PTCD3-214ENST00000483925 MLANAQ16655 118 aa5.93□□□□□ -1.46
PTCD3-214ENST00000483925 ZBTB37Q5TC79 503 aa5.93□□□□□ -1.46
PTCD3-214ENST00000483925 SCARA3Q6AZY7 606 aa5.93□□□□□ -1.46
PTCD3-214ENST00000483925 UBE3DQ7Z6J8 389 aa5.93□□□□□ -1.46
PTCD3-214ENST00000483925 SYNPOQ8N3V7 929 aa5.93□□□□□ -1.46
PTCD3-214ENST00000483925 LILRB2Q8N423 598 aa5.93□□□□□ -1.46
PTCD3-214ENST00000483925 EAF1Q96JC9 268 aaPredicted RBP5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms