RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 DDX19AQ9NUU7 478 aaKnown RBP10.21□□□□□ -0.77
CDC42SE1-204ENST00000483763 MAD2L2Q9UI95 211 aa10.21□□□□□ -0.77
CDC42SE1-204ENST00000483763 A0A087WWV3 80 aa10.21□□□□□ -0.78
CDC42SE1-204ENST00000483763 WNT7AO00755 349 aa10.21□□□□□ -0.78
CDC42SE1-204ENST00000483763 GOLGA8HP0CJ92 632 aa10.21□□□□□ -0.78
CDC42SE1-204ENST00000483763 MAP3K11Q16584 847 aa10.21□□□□□ -0.78
CDC42SE1-204ENST00000483763 CLEC10AQ8IUN9 316 aa10.21□□□□□ -0.78
CDC42SE1-204ENST00000483763 FMR1NBQ8N0W7 255 aaPredicted RBP10.21□□□□□ -0.78
CDC42SE1-204ENST00000483763 FSIP1Q8NA03 581 aa10.21□□□□□ -0.78
CDC42SE1-204ENST00000483763 KCNG4Q8TDN1 519 aa10.21□□□□□ -0.78
CDC42SE1-204ENST00000483763 ZDHHC15Q96MV8 337 aa10.21□□□□□ -0.78
CDC42SE1-204ENST00000483763 PHF20Q9BVI0 1012 aa10.21□□□□□ -0.78
CDC42SE1-204ENST00000483763 PIM2Q9P1W9 311 aa10.21□□□□□ -0.78
CDC42SE1-204ENST00000483763 PRELPP51888 382 aa10.2□□□□□ -0.78
CDC42SE1-204ENST00000483763 NEDD1Q8NHV4 660 aa10.2□□□□□ -0.78
CDC42SE1-204ENST00000483763 CLIC6Q96NY7 704 aa10.2□□□□□ -0.78
CDC42SE1-204ENST00000483763 OSBPL5Q9H0X9 879 aaPredicted RBP10.2□□□□□ -0.78
CDC42SE1-204ENST00000483763 FOXP1Q9H334 677 aaPredicted RBP10.2□□□□□ -0.78
CDC42SE1-204ENST00000483763 PCDHB6Q9Y5E3 794 aa10.2□□□□□ -0.78
CDC42SE1-204ENST00000483763 MRVI1Q9Y6F6 885 aa10.2□□□□□ -0.78
CDC42SE1-204ENST00000483763 PPIP5K2O43314 1243 aa10.19□□□□□ -0.78
CDC42SE1-204ENST00000483763 TGFB2P61812 414 aa10.19□□□□□ -0.78
CDC42SE1-204ENST00000483763 AKAP17AQ02040 695 aaKnown RBP10.19□□□□□ -0.78
CDC42SE1-204ENST00000483763 RASSF7Q02833 373 aa10.19□□□□□ -0.78
CDC42SE1-204ENST00000483763 GRIN1Q05586 938 aa10.19□□□□□ -0.78
CDC42SE1-204ENST00000483763 FAM160A1Q05DH4 1040 aa10.19□□□□□ -0.78
CDC42SE1-204ENST00000483763 TCP10Q12799 353 aa10.19□□□□□ -0.78
CDC42SE1-204ENST00000483763 SHROOM1Q2M3G4 852 aaPredicted RBP10.19□□□□□ -0.78
CDC42SE1-204ENST00000483763 CCDC93Q567U6 631 aa10.19□□□□□ -0.78
CDC42SE1-204ENST00000483763 CC2D2BQ6DHV5 1058 aa10.19□□□□□ -0.78
CDC42SE1-204ENST00000483763 TYW1BQ6NUM6 668 aa10.19□□□□□ -0.78
CDC42SE1-204ENST00000483763 PPP1R9BQ96SB3 815 aa10.19□□□□□ -0.78
CDC42SE1-204ENST00000483763 CABP5Q9NP86 173 aa10.19□□□□□ -0.78
CDC42SE1-204ENST00000483763 MYH1P12882 1939 aa10.19□□□□□ -0.78
CDC42SE1-204ENST00000483763 A0A1W2PQ27 194 aa10.19□□□□□ -0.78
CDC42SE1-204ENST00000483763 A0A1W2PQ64 194 aa10.19□□□□□ -0.78
CDC42SE1-204ENST00000483763 A0A1W2PQD8 194 aa10.19□□□□□ -0.78
CDC42SE1-204ENST00000483763 FAM196BA6NMK8 535 aa10.19□□□□□ -0.78
CDC42SE1-204ENST00000483763 AKR1B1P15121 316 aa10.19□□□□□ -0.78
CDC42SE1-204ENST00000483763 NOVP48745 357 aa10.19□□□□□ -0.78
CDC42SE1-204ENST00000483763 TYRO3Q06418 890 aa10.19□□□□□ -0.78
CDC42SE1-204ENST00000483763 GRM4Q14833 912 aa10.19□□□□□ -0.78
CDC42SE1-204ENST00000483763 SAFBQ15424 915 aaKnown RBP eCLIP10.19□□□□□ -0.78
CDC42SE1-204ENST00000483763 DALRD3Q5D0E6 543 aaKnown RBP10.19□□□□□ -0.78
CDC42SE1-204ENST00000483763 SHC4Q6S5L8 630 aa10.19□□□□□ -0.78
CDC42SE1-204ENST00000483763 MRPS27Q92552 414 aaKnown RBP10.19□□□□□ -0.78
CDC42SE1-204ENST00000483763 DNAJC18Q9H819 358 aa10.19□□□□□ -0.78
CDC42SE1-204ENST00000483763 ZNF287Q9HBT7 754 aa10.19□□□□□ -0.78
CDC42SE1-204ENST00000483763 ZNF277Q9NRM2 450 aaPredicted RBP10.19□□□□□ -0.78
CDC42SE1-204ENST00000483763 FAM198AQ9UFP1 575 aa10.19□□□□□ -0.78
CDC42SE1-204ENST00000483763 SERPINB13Q9UIV8 391 aa10.19□□□□□ -0.78
CDC42SE1-204ENST00000483763 COL4A5P29400 1685 aa10.19□□□□□ -0.78
CDC42SE1-204ENST00000483763 PALM3A6NDB9 673 aaPredicted RBP10.18□□□□□ -0.78
CDC42SE1-204ENST00000483763 DDTLA6NHG4 134 aaPredicted RBP10.18□□□□□ -0.78
CDC42SE1-204ENST00000483763 SCG2P13521 617 aa10.18□□□□□ -0.78
CDC42SE1-204ENST00000483763 ATP2B1P20020 1258 aa10.18□□□□□ -0.78
CDC42SE1-204ENST00000483763 SHMT1P34896 483 aa10.18□□□□□ -0.78
CDC42SE1-204ENST00000483763 RBM5P52756 815 aaKnown RBP eCLIP10.18□□□□□ -0.78
CDC42SE1-204ENST00000483763 EIF6P56537 245 aaKnown RBP10.18□□□□□ -0.78
CDC42SE1-204ENST00000483763 PFKFB3Q16875 520 aaPredicted RBP10.18□□□□□ -0.78
CDC42SE1-204ENST00000483763 USP17L2Q6R6M4 530 aa10.18□□□□□ -0.78
CDC42SE1-204ENST00000483763 SH3BP5LQ7L8J4 393 aa10.18□□□□□ -0.78
CDC42SE1-204ENST00000483763 SUPT20HQ8NEM7 779 aa10.18□□□□□ -0.78
CDC42SE1-204ENST00000483763 GPKOWQ92917 476 aaPredicted RBP eCLIP10.18□□□□□ -0.785e-8■■□□□ 14
CDC42SE1-204ENST00000483763 TNFRSF25Q93038 417 aa10.18□□□□□ -0.78
CDC42SE1-204ENST00000483763 PDLIM2Q96JY6 352 aa10.18□□□□□ -0.78
CDC42SE1-204ENST00000483763 PRMT6Q96LA8 375 aaPredicted RBP10.18□□□□□ -0.78
CDC42SE1-204ENST00000483763 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.18□□□□□ -0.78
CDC42SE1-204ENST00000483763 FOCADQ5VW36 1801 aa10.18□□□□□ -0.78
CDC42SE1-204ENST00000483763 ZNF646O15015 1829 aaPredicted RBP10.18□□□□□ -0.78
CDC42SE1-204ENST00000483763 CCDC192P0DO97 292 aa10.18□□□□□ -0.78
CDC42SE1-204ENST00000483763 KIF5BP33176 963 aa10.18□□□□□ -0.78
CDC42SE1-204ENST00000483763 SPECC1Q5M775 1068 aa10.18□□□□□ -0.78
CDC42SE1-204ENST00000483763 CCDC73Q6ZRK6 1079 aa10.18□□□□□ -0.78
CDC42SE1-204ENST00000483763 MRIQ9BWK5 157 aa10.18□□□□□ -0.78
CDC42SE1-204ENST00000483763 AP5Z1O43299 807 aa10.17□□□□□ -0.78
CDC42SE1-204ENST00000483763 PPP6R2O75170 966 aa10.17□□□□□ -0.78
CDC42SE1-204ENST00000483763 RAD17O75943 681 aa10.17□□□□□ -0.78
CDC42SE1-204ENST00000483763 PFKFB1P16118 471 aa10.17□□□□□ -0.78
CDC42SE1-204ENST00000483763 CMA1P23946 247 aa10.17□□□□□ -0.78
CDC42SE1-204ENST00000483763 NT5C2P49902 561 aa10.17□□□□□ -0.78
CDC42SE1-204ENST00000483763 FKBP1AP62942 108 aaKnown RBP10.17□□□□□ -0.78
CDC42SE1-204ENST00000483763 RTKN2Q8IZC4 609 aa10.17□□□□□ -0.78
CDC42SE1-204ENST00000483763 TDRD3Q9H7E2 651 aaKnown RBP10.17□□□□□ -0.78
CDC42SE1-204ENST00000483763 MTMR4Q9NYA4 1195 aa10.17□□□□□ -0.78
CDC42SE1-204ENST00000483763 MYH6P13533 1939 aa10.17□□□□□ -0.78
CDC42SE1-204ENST00000483763 KIF13BQ9NQT8 1826 aa10.17□□□□□ -0.78
CDC42SE1-204ENST00000483763 IGKV6D-41A0A0C4DH26 115 aa10.17□□□□□ -0.78
CDC42SE1-204ENST00000483763 USP17L5A8MUK1 530 aa10.17□□□□□ -0.78
CDC42SE1-204ENST00000483763 KLRF2D3W0D1 207 aa10.17□□□□□ -0.78
CDC42SE1-204ENST00000483763 ZNF202O95125 648 aa10.17□□□□□ -0.78
CDC42SE1-204ENST00000483763 CCDC173Q0VFZ6 552 aa10.17□□□□□ -0.78
CDC42SE1-204ENST00000483763 ANO6Q4KMQ2 910 aa10.17□□□□□ -0.78
CDC42SE1-204ENST00000483763 RILPL1Q5EBL4 403 aa10.17□□□□□ -0.78
CDC42SE1-204ENST00000483763 ZNF784Q8NCA9 323 aaPredicted RBP10.17□□□□□ -0.78
CDC42SE1-204ENST00000483763 USP25Q9UHP3 1055 aa10.17□□□□□ -0.78
CDC42SE1-204ENST00000483763 ZBTB12Q9Y330 459 aaPredicted RBP10.17□□□□□ -0.78
CDC42SE1-204ENST00000483763 KINO60870 393 aaKnown RBP10.16□□□□□ -0.78
CDC42SE1-204ENST00000483763 XBP1P17861 261 aa10.16□□□□□ -0.78
CDC42SE1-204ENST00000483763 KRT2P35908 639 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms