RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 MIGA2Q7L4E1 593 aa11.74□□□□□ -0.53
HDAC6-226ENST00000483656 FERMT3Q86UX7 667 aa11.74□□□□□ -0.53
HDAC6-226ENST00000483656 LRRC47Q8N1G4 583 aaKnown RBP11.74□□□□□ -0.53
HDAC6-226ENST00000483656 FBXO18Q8NFZ0 1043 aa11.74□□□□□ -0.53
HDAC6-226ENST00000483656 SHISA4Q96DD7 197 aa11.74□□□□□ -0.53
HDAC6-226ENST00000483656 GBP4Q96PP9 640 aa11.74□□□□□ -0.53
HDAC6-226ENST00000483656 ALG1Q9BT22 464 aa11.74□□□□□ -0.53
HDAC6-226ENST00000483656 RNF26Q9BY78 433 aaPredicted RBP11.74□□□□□ -0.53
HDAC6-226ENST00000483656 DEFB129Q9H1M3 183 aa11.74□□□□□ -0.53
HDAC6-226ENST00000483656 NYAP2Q9P242 653 aa11.74□□□□□ -0.53
HDAC6-226ENST00000483656 KIF3AQ9Y496 699 aa11.74□□□□□ -0.53
HDAC6-226ENST00000483656 CNTNAP5Q8WYK1 1306 aa11.74□□□□□ -0.53
HDAC6-226ENST00000483656 hCG_1642624A0A1W2PR95 340 aa11.73□□□□□ -0.53
HDAC6-226ENST00000483656 USP17L5A8MUK1 530 aa11.73□□□□□ -0.53
HDAC6-226ENST00000483656 PHF20L1A8MW92 1017 aa11.73□□□□□ -0.53
HDAC6-226ENST00000483656 H3BQV1 296 aa11.73□□□□□ -0.53
HDAC6-226ENST00000483656 EEF2P13639 858 aaKnown RBP11.73□□□□□ -0.53
HDAC6-226ENST00000483656 KIF5BP33176 963 aa11.73□□□□□ -0.53
HDAC6-226ENST00000483656 TNFAIP1Q13829 316 aa11.73□□□□□ -0.53
HDAC6-226ENST00000483656 NBR1Q14596 966 aa11.73□□□□□ -0.53
HDAC6-226ENST00000483656 FOXD4L6Q3SYB3 417 aaPredicted RBP11.73□□□□□ -0.53
HDAC6-226ENST00000483656 NBPF12Q5TAG4 269 aaPredicted RBP11.73□□□□□ -0.53
HDAC6-226ENST00000483656 FAM173BQ6P4H8 233 aa11.73□□□□□ -0.53
HDAC6-226ENST00000483656 USP17L2Q6R6M4 530 aa11.73□□□□□ -0.53
HDAC6-226ENST00000483656 FOXD4L3Q6VB84 417 aaPredicted RBP11.73□□□□□ -0.53
HDAC6-226ENST00000483656 RGS22Q8NE09 1264 aa11.73□□□□□ -0.53
HDAC6-226ENST00000483656 L3MBTL3Q96JM7 780 aaPredicted RBP11.73□□□□□ -0.53
HDAC6-226ENST00000483656 C8orf76Q96K31 380 aa11.73□□□□□ -0.53
HDAC6-226ENST00000483656 KANSL2Q9H9L4 492 aa11.73□□□□□ -0.53
HDAC6-226ENST00000483656 ADARB2Q9NS39 739 aaKnown RBP11.73□□□□□ -0.53
HDAC6-226ENST00000483656 MTMR7Q9Y216 660 aa11.73□□□□□ -0.53
HDAC6-226ENST00000483656 V9GY48 417 aaPredicted RBP11.73□□□□□ -0.53
HDAC6-226ENST00000483656 CYTH3O43739 400 aa11.72□□□□□ -0.53
HDAC6-226ENST00000483656 DEXIO95424 95 aa11.72□□□□□ -0.53
HDAC6-226ENST00000483656 SLC34A2O95436 690 aa11.72□□□□□ -0.53
HDAC6-226ENST00000483656 GOLGA8HP0CJ92 632 aa11.72□□□□□ -0.53
HDAC6-226ENST00000483656 PDHBP11177 359 aa11.72□□□□□ -0.53
HDAC6-226ENST00000483656 VEGFAP15692 232 aaPredicted RBP11.72□□□□□ -0.53
HDAC6-226ENST00000483656 PRAMEF18Q5VWM3 479 aa11.72□□□□□ -0.53
HDAC6-226ENST00000483656 KRT40Q6A162 431 aa11.72□□□□□ -0.53
HDAC6-226ENST00000483656 MCTP1Q6DN14 999 aa11.72□□□□□ -0.53
HDAC6-226ENST00000483656 APOBEC3FQ8IUX4 373 aaKnown RBP11.72□□□□□ -0.53
HDAC6-226ENST00000483656 TRIM22Q8IYM9 498 aa11.72□□□□□ -0.53
HDAC6-226ENST00000483656 CPVLQ9H3G5 476 aa11.72□□□□□ -0.53
HDAC6-226ENST00000483656 GGA3Q9NZ52 723 aa11.72□□□□□ -0.53
HDAC6-226ENST00000483656 ZBTB21Q9ULJ3 1066 aa11.72□□□□□ -0.53
HDAC6-226ENST00000483656 PITPNM2Q9BZ72 1349 aa11.71□□□□□ -0.53
HDAC6-226ENST00000483656 ZC3H4Q9UPT8 1303 aaKnown RBP11.71□□□□□ -0.53
HDAC6-226ENST00000483656 A0A1W2PRG0 241 aa11.71□□□□□ -0.53
HDAC6-226ENST00000483656 GLTPD2A6NH11 291 aa11.71□□□□□ -0.53
HDAC6-226ENST00000483656 POTECB2RU33 542 aa11.71□□□□□ -0.53
HDAC6-226ENST00000483656 KIF28PB7ZC32 967 aa11.71□□□□□ -0.53
HDAC6-226ENST00000483656 KLRF2D3W0D1 207 aa11.71□□□□□ -0.53
HDAC6-226ENST00000483656 PARP1P09874 1014 aaKnown RBP11.71□□□□□ -0.53
HDAC6-226ENST00000483656 LMOD1P29536 600 aaPredicted RBP11.71□□□□□ -0.53
HDAC6-226ENST00000483656 CAP2P40123 477 aa11.71□□□□□ -0.53
HDAC6-226ENST00000483656 GNAQP50148 359 aa11.71□□□□□ -0.53
HDAC6-226ENST00000483656 ATP2B2Q01814 1243 aa11.71□□□□□ -0.53
HDAC6-226ENST00000483656 ICA1Q05084 483 aa11.71□□□□□ -0.53
HDAC6-226ENST00000483656 PPP4R3BQ5MIZ7 849 aa11.71□□□□□ -0.53
HDAC6-226ENST00000483656 WASF1Q92558 559 aa11.71□□□□□ -0.53
HDAC6-226ENST00000483656 CABP5Q9NP86 173 aa11.71□□□□□ -0.53
HDAC6-226ENST00000483656 LMBRD1Q9NUN5 540 aa11.71□□□□□ -0.53
HDAC6-226ENST00000483656 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.71□□□□□ -0.53
HDAC6-226ENST00000483656 FRMPD2Q68DX3 1309 aaPredicted RBP11.7□□□□□ -0.54
HDAC6-226ENST00000483656 SMARCA1P28370 1054 aa11.7□□□□□ -0.54
HDAC6-226ENST00000483656 KIF23Q02241 960 aaPredicted RBP11.7□□□□□ -0.54
HDAC6-226ENST00000483656 DNM1Q05193 864 aaKnown RBP11.7□□□□□ -0.54
HDAC6-226ENST00000483656 ZNF543Q08ER8 600 aa11.7□□□□□ -0.54
HDAC6-226ENST00000483656 DPY19L2Q6NUT2 758 aa11.7□□□□□ -0.54
HDAC6-226ENST00000483656 DLK2Q6UY11 383 aa11.7□□□□□ -0.54
HDAC6-226ENST00000483656 ACER1Q8TDN7 264 aa11.7□□□□□ -0.54
HDAC6-226ENST00000483656 LZTS2Q9BRK4 669 aa11.7□□□□□ -0.54
HDAC6-226ENST00000483656 SPZ1Q9BXG8 430 aa11.7□□□□□ -0.54
HDAC6-226ENST00000483656 UBA5Q9GZZ9 404 aa11.7□□□□□ -0.54
HDAC6-226ENST00000483656 ZSCAN16Q9H4T2 348 aaPredicted RBP11.7□□□□□ -0.54
HDAC6-226ENST00000483656 ZNF112Q9UJU3 913 aa11.7□□□□□ -0.54
HDAC6-226ENST00000483656 KCNJ14Q9UNX9 436 aa11.7□□□□□ -0.54
HDAC6-226ENST00000483656 CNPY2Q9Y2B0 182 aa11.7□□□□□ -0.54
HDAC6-226ENST00000483656 SSC5DA1L4H1 1573 aa11.7□□□□□ -0.54
HDAC6-226ENST00000483656 MYH4Q9Y623 1939 aa11.7□□□□□ -0.54
HDAC6-226ENST00000483656 UTRNP46939 3433 aa11.69□□□□□ -0.54
HDAC6-226ENST00000483656 DDX11L8A8MPP1 907 aa11.69□□□□□ -0.54
HDAC6-226ENST00000483656 F5H6K3 240 aa11.69□□□□□ -0.54
HDAC6-226ENST00000483656 CAPN15O75808 1086 aa11.69□□□□□ -0.54
HDAC6-226ENST00000483656 ECE1P42892 770 aa11.69□□□□□ -0.54
HDAC6-226ENST00000483656 AKAP17AQ02040 695 aaKnown RBP11.69□□□□□ -0.54
HDAC6-226ENST00000483656 KLRC3Q07444 240 aa11.69□□□□□ -0.54
HDAC6-226ENST00000483656 NPY5RQ15761 445 aa11.69□□□□□ -0.54
HDAC6-226ENST00000483656 PFKFB3Q16875 520 aaPredicted RBP11.69□□□□□ -0.54
HDAC6-226ENST00000483656 ASPRV1Q53RT3 343 aa11.69□□□□□ -0.54
HDAC6-226ENST00000483656 KIAA1755Q5JYT7 1200 aa11.69□□□□□ -0.54
HDAC6-226ENST00000483656 SLFN13Q68D06 897 aa11.69□□□□□ -0.54
HDAC6-226ENST00000483656 TTBK2Q6IQ55 1244 aa11.69□□□□□ -0.54
HDAC6-226ENST00000483656 GMCL1P1Q8NEA9 526 aa11.69□□□□□ -0.54
HDAC6-226ENST00000483656 PIBF1Q8WXW3 757 aa11.69□□□□□ -0.54
HDAC6-226ENST00000483656 RIOX1Q9H6W3 641 aa11.69□□□□□ -0.54
HDAC6-226ENST00000483656 GDPD2Q9HCC8 539 aa11.69□□□□□ -0.54
HDAC6-226ENST00000483656 GPCPD1Q9NPB8 672 aa11.69□□□□□ -0.54
HDAC6-226ENST00000483656 ATP6V1DQ9Y5K8 247 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms