RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 FAM177A1Q8N128 213 aaPredicted RBP15.23■□□□□ 0.03
CPNE1-225ENST00000483495 KRI1Q8N9T8 703 aaKnown RBP15.23■□□□□ 0.03
CPNE1-225ENST00000483495 CEP95Q96GE4 821 aa15.23■□□□□ 0.03
CPNE1-225ENST00000483495 CABP5Q9NP86 173 aa15.23■□□□□ 0.03
CPNE1-225ENST00000483495 CEP131Q9UPN4 1083 aa15.23■□□□□ 0.03
CPNE1-225ENST00000483495 IGKV6D-41A0A0C4DH26 115 aa15.22■□□□□ 0.03
CPNE1-225ENST00000483495 NPM3O75607 178 aaKnown RBP15.22■□□□□ 0.03
CPNE1-225ENST00000483495 AOC3Q16853 763 aa15.22■□□□□ 0.03
CPNE1-225ENST00000483495 SLC35G1Q2M3R5 365 aa15.22■□□□□ 0.03
CPNE1-225ENST00000483495 EHD4Q9H223 541 aa15.22■□□□□ 0.03
CPNE1-225ENST00000483495 ZNF219Q9P2Y4 722 aaPredicted RBP15.22■□□□□ 0.03
CPNE1-225ENST00000483495 SERPINB13Q9UIV8 391 aa15.22■□□□□ 0.03
CPNE1-225ENST00000483495 SERPINA10Q9UK55 444 aa15.22■□□□□ 0.03
CPNE1-225ENST00000483495 PCDHB6Q9Y5E3 794 aa15.22■□□□□ 0.03
CPNE1-225ENST00000483495 SCN9AQ15858 1988 aa15.22■□□□□ 0.03
CPNE1-225ENST00000483495 SMARCA1P28370 1054 aa15.21■□□□□ 0.03
CPNE1-225ENST00000483495 STX1AQ16623 288 aa15.21■□□□□ 0.03
CPNE1-225ENST00000483495 ZNF579Q8NAF0 562 aaKnown RBP15.21■□□□□ 0.03
CPNE1-225ENST00000483495 SDF4Q9BRK5 362 aa15.21■□□□□ 0.03
CPNE1-225ENST00000483495 SPZ1Q9BXG8 430 aa15.21■□□□□ 0.03
CPNE1-225ENST00000483495 IDI2Q9BXS1 227 aa15.21■□□□□ 0.03
CPNE1-225ENST00000483495 CBX8Q9HC52 389 aa15.21■□□□□ 0.03
CPNE1-225ENST00000483495 USP25Q9UHP3 1055 aa15.21■□□□□ 0.03
CPNE1-225ENST00000483495 FBXO2Q9UK22 296 aaPredicted RBP15.21■□□□□ 0.03
CPNE1-225ENST00000483495 ADAMTSL1Q8N6G6 1762 aa15.21■□□□□ 0.03
CPNE1-225ENST00000483495 CYTH3O43739 400 aa15.2■□□□□ 0.02
CPNE1-225ENST00000483495 VEGFAP15692 232 aaPredicted RBP15.2■□□□□ 0.02
CPNE1-225ENST00000483495 CALML3P27482 149 aa15.2■□□□□ 0.02
CPNE1-225ENST00000483495 EARS2Q5JPH6 523 aaKnown RBP15.2■□□□□ 0.02
CPNE1-225ENST00000483495 KIAA0825Q8IV33 1275 aa15.2■□□□□ 0.02
CPNE1-225ENST00000483495 TTLL6Q8N841 843 aa15.2■□□□□ 0.02
CPNE1-225ENST00000483495 CLIC6Q96NY7 704 aa15.2■□□□□ 0.02
CPNE1-225ENST00000483495 MTMR4Q9NYA4 1195 aa15.2■□□□□ 0.02
CPNE1-225ENST00000483495 TRIM75PA6NK02 468 aa15.2■□□□□ 0.02
CPNE1-225ENST00000483495 C21orf2O43822 256 aa15.2■□□□□ 0.02
CPNE1-225ENST00000483495 BMP15O95972 392 aa15.2■□□□□ 0.02
CPNE1-225ENST00000483495 HLA-DOAP06340 250 aa15.2■□□□□ 0.02
CPNE1-225ENST00000483495 SHMT1P34896 483 aa15.2■□□□□ 0.02
CPNE1-225ENST00000483495 SYKP43405 635 aa15.2■□□□□ 0.02
CPNE1-225ENST00000483495 NLRP5P59047 1200 aa15.2■□□□□ 0.02
CPNE1-225ENST00000483495 NFIAQ12857 509 aa15.2■□□□□ 0.02
CPNE1-225ENST00000483495 ELOA2Q8IYF1 753 aaPredicted RBP15.2■□□□□ 0.02
CPNE1-225ENST00000483495 PSMD1Q99460 953 aa15.2■□□□□ 0.02
CPNE1-225ENST00000483495 KIAA1468Q9P260 1216 aa15.2■□□□□ 0.02
CPNE1-225ENST00000483495 SRPRBQ9Y5M8 271 aaKnown RBP15.2■□□□□ 0.02
CPNE1-225ENST00000483495 FAM205CA6NFA0 338 aa15.19■□□□□ 0.02
CPNE1-225ENST00000483495 ESPNB1AK53 854 aa15.19■□□□□ 0.02
CPNE1-225ENST00000483495 AKR1B1P15121 316 aa15.19■□□□□ 0.02
CPNE1-225ENST00000483495 KCNA3P22001 575 aa15.19■□□□□ 0.02
CPNE1-225ENST00000483495 TRAPPC10P48553 1259 aa15.19■□□□□ 0.02
CPNE1-225ENST00000483495 ZNF165P49910 485 aa15.19■□□□□ 0.02
CPNE1-225ENST00000483495 CCDC93Q567U6 631 aa15.19■□□□□ 0.02
CPNE1-225ENST00000483495 RTKN2Q8IZC4 609 aa15.19■□□□□ 0.02
CPNE1-225ENST00000483495 DNAJC25Q9H1X3 360 aa15.19■□□□□ 0.02
CPNE1-225ENST00000483495 DHX36Q9H2U1 1008 aaKnown RBP15.19■□□□□ 0.02
CPNE1-225ENST00000483495 ANO10Q9NW15 660 aa15.19■□□□□ 0.02
CPNE1-225ENST00000483495 NOL7Q9UMY1 257 aaKnown RBP15.19■□□□□ 0.02
CPNE1-225ENST00000483495 YDJCA8MPS7 323 aa15.18■□□□□ 0.02
CPNE1-225ENST00000483495 KLRF2D3W0D1 207 aa15.18■□□□□ 0.02
CPNE1-225ENST00000483495 PPIP5K2O43314 1243 aa15.18■□□□□ 0.02
CPNE1-225ENST00000483495 ADCY5O95622 1261 aa15.18■□□□□ 0.02
CPNE1-225ENST00000483495 PARP1P09874 1014 aaKnown RBP15.18■□□□□ 0.02
CPNE1-225ENST00000483495 GALNT17Q6IS24 598 aa15.18■□□□□ 0.02
CPNE1-225ENST00000483495 LUZP1Q86V48 1076 aa15.18■□□□□ 0.02
CPNE1-225ENST00000483495 DAGLBQ8NCG7 672 aa15.18■□□□□ 0.02
CPNE1-225ENST00000483495 RRAGDQ9NQL2 400 aaPredicted RBP15.18■□□□□ 0.02
CPNE1-225ENST00000483495 M0R2N6 131 aa15.18■□□□□ 0.02
CPNE1-225ENST00000483495 AP5Z1O43299 807 aa15.18■□□□□ 0.02
CPNE1-225ENST00000483495 SNHG28P0DPA3 235 aa15.18■□□□□ 0.02
CPNE1-225ENST00000483495 IQCB1Q15051 598 aa15.18■□□□□ 0.02
CPNE1-225ENST00000483495 BARHL2Q9NY43 387 aa15.18■□□□□ 0.02
CPNE1-225ENST00000483495 FAM198AQ9UFP1 575 aa15.18■□□□□ 0.02
CPNE1-225ENST00000483495 KCNH3Q9ULD8 1083 aa15.18■□□□□ 0.02
CPNE1-225ENST00000483495 PCDHA4Q9UN74 947 aa15.18■□□□□ 0.02
CPNE1-225ENST00000483495 WWC2Q6AWC2 1192 aa15.17■□□□□ 0.02
CPNE1-225ENST00000483495 C11orf57Q6ZUT1 292 aaPredicted RBP15.17■□□□□ 0.02
CPNE1-225ENST00000483495 ZFPM1Q8IX07 1006 aa15.17■□□□□ 0.02
CPNE1-225ENST00000483495 BLIDQ8IZY5 108 aa15.17■□□□□ 0.02
CPNE1-225ENST00000483495 CCDC148Q8NFR7 591 aa15.17■□□□□ 0.02
CPNE1-225ENST00000483495 CCDC17Q96LX7 622 aa15.17■□□□□ 0.02
CPNE1-225ENST00000483495 VPS33BQ9H267 617 aa15.17■□□□□ 0.02
CPNE1-225ENST00000483495 CCDC39Q9UFE4 941 aa15.17■□□□□ 0.02
CPNE1-225ENST00000483495 PCDHAC2Q9Y5I4 1007 aa15.17■□□□□ 0.02
CPNE1-225ENST00000483495 STXBP3O00186 592 aa15.16■□□□□ 0.02
CPNE1-225ENST00000483495 TTLL1O95922 423 aa15.16■□□□□ 0.02
CPNE1-225ENST00000483495 PDHBP11177 359 aa15.16■□□□□ 0.02
CPNE1-225ENST00000483495 DPEP1P16444 411 aa15.16■□□□□ 0.02
CPNE1-225ENST00000483495 GRIN1Q05586 938 aa15.16■□□□□ 0.02
CPNE1-225ENST00000483495 NOM1Q5C9Z4 860 aaKnown RBP15.16■□□□□ 0.02
CPNE1-225ENST00000483495 TTC38Q5R3I4 469 aa15.16■□□□□ 0.02
CPNE1-225ENST00000483495 TYW1BQ6NUM6 668 aa15.16■□□□□ 0.02
CPNE1-225ENST00000483495 USP17L2Q6R6M4 530 aa15.16■□□□□ 0.02
CPNE1-225ENST00000483495 ZSCAN30Q86W11 494 aa15.16■□□□□ 0.02
CPNE1-225ENST00000483495 PIBF1Q8WXW3 757 aa15.16■□□□□ 0.02
CPNE1-225ENST00000483495 GPKOWQ92917 476 aaPredicted RBP eCLIP15.16■□□□□ 0.021e-7■■■■□ 26.1
CPNE1-225ENST00000483495 FAM13BQ9NYF5 915 aa15.16■□□□□ 0.02
CPNE1-225ENST00000483495 TUBE1Q9UJT0 475 aa15.16■□□□□ 0.02
CPNE1-225ENST00000483495 GREB1LQ9C091 1923 aaPredicted RBP15.16■□□□□ 0.02
CPNE1-225ENST00000483495 KIF13BQ9NQT8 1826 aa15.16■□□□□ 0.02
CPNE1-225ENST00000483495 WNT7AO00755 349 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms