RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 PRR36Q9H6K5 1346 aa5.72□□□□□ -1.49
LAPTM4A-202ENST00000483117 TLR3O15455 904 aaKnown RBP5.71□□□□□ -1.5
LAPTM4A-202ENST00000483117 HPXP02790 462 aa5.71□□□□□ -1.5
LAPTM4A-202ENST00000483117 GARTP22102 1010 aa5.71□□□□□ -1.5
LAPTM4A-202ENST00000483117 SNAP47Q5SQN1 464 aa5.71□□□□□ -1.5
LAPTM4A-202ENST00000483117 CCDC74BQ96LY2 380 aa5.71□□□□□ -1.5
LAPTM4A-202ENST00000483117 KREMEN1Q96MU8 473 aa5.71□□□□□ -1.5
LAPTM4A-202ENST00000483117 COPRSQ9NQ92 184 aa5.71□□□□□ -1.5
LAPTM4A-202ENST00000483117 PCDHA11Q9Y5I1 949 aa5.71□□□□□ -1.5
LAPTM4A-202ENST00000483117 SHISA3A0PJX4 238 aa5.7□□□□□ -1.5
LAPTM4A-202ENST00000483117 TSPAN15O95858 294 aa5.7□□□□□ -1.5
LAPTM4A-202ENST00000483117 KRT1P04264 644 aa5.7□□□□□ -1.5
LAPTM4A-202ENST00000483117 C1QTNF9P0C862 333 aa5.7□□□□□ -1.5
LAPTM4A-202ENST00000483117 LTKP29376 864 aa5.7□□□□□ -1.5
LAPTM4A-202ENST00000483117 PWP1Q13610 501 aa5.7□□□□□ -1.5
LAPTM4A-202ENST00000483117 MPP2Q14168 576 aa5.7□□□□□ -1.5
LAPTM4A-202ENST00000483117 REC114Q7Z4M0 266 aa5.7□□□□□ -1.5
LAPTM4A-202ENST00000483117 PHACTR4Q8IZ21 702 aa5.7□□□□□ -1.5
LAPTM4A-202ENST00000483117 FBXO15Q8NCQ5 510 aaPredicted RBP5.7□□□□□ -1.5
LAPTM4A-202ENST00000483117 PPP1R16BQ96T49 567 aa5.7□□□□□ -1.5
LAPTM4A-202ENST00000483117 KIF2CQ99661 725 aa5.7□□□□□ -1.5
LAPTM4A-202ENST00000483117 GZF1Q9H116 711 aaPredicted RBP5.7□□□□□ -1.5
LAPTM4A-202ENST00000483117 C19orf44Q9H6X5 657 aa5.7□□□□□ -1.5
LAPTM4A-202ENST00000483117 SP110Q9HB58 689 aa5.7□□□□□ -1.5
LAPTM4A-202ENST00000483117 KBTBD4Q9NVX7 518 aa5.7□□□□□ -1.5
LAPTM4A-202ENST00000483117 ZGLP1P0C6A0 271 aa5.69□□□□□ -1.5
LAPTM4A-202ENST00000483117 CFPP27918 469 aa5.69□□□□□ -1.5
LAPTM4A-202ENST00000483117 CCDC27Q2M243 656 aa5.69□□□□□ -1.5
LAPTM4A-202ENST00000483117 RNF32Q9H0A6 362 aa5.69□□□□□ -1.5
LAPTM4A-202ENST00000483117 EPB41L4BQ9H329 900 aa5.69□□□□□ -1.5
LAPTM4A-202ENST00000483117 DCP1AQ9NPI6 582 aaPredicted RBP5.69□□□□□ -1.5
LAPTM4A-202ENST00000483117 JAG2Q9Y219 1238 aa5.69□□□□□ -1.5
LAPTM4A-202ENST00000483117 GBP1P32455 592 aa5.68□□□□□ -1.5
LAPTM4A-202ENST00000483117 TIGD5Q53EQ6 642 aa5.68□□□□□ -1.5
LAPTM4A-202ENST00000483117 FBXL19Q6PCT2 694 aa5.68□□□□□ -1.5
LAPTM4A-202ENST00000483117 FAM196AQ6ZSG2 479 aa5.68□□□□□ -1.5
LAPTM4A-202ENST00000483117 C1QL4Q86Z23 238 aa5.68□□□□□ -1.5
LAPTM4A-202ENST00000483117 TOX2Q96NM4 488 aa5.68□□□□□ -1.5
LAPTM4A-202ENST00000483117 B8ZZF3 427 aa5.67□□□□□ -1.5
LAPTM4A-202ENST00000483117 NFIBO00712 420 aa5.67□□□□□ -1.5
LAPTM4A-202ENST00000483117 ARSHQ5FYA8 562 aa5.67□□□□□ -1.5
LAPTM4A-202ENST00000483117 ERMP1Q7Z2K6 904 aa5.67□□□□□ -1.5
LAPTM4A-202ENST00000483117 ANKLE2Q86XL3 938 aa5.67□□□□□ -1.5
LAPTM4A-202ENST00000483117 PDZD8Q8NEN9 1154 aa5.67□□□□□ -1.5
LAPTM4A-202ENST00000483117 VWCEQ96DN2 955 aa5.67□□□□□ -1.5
LAPTM4A-202ENST00000483117 ASPNQ9BXN1 380 aa5.67□□□□□ -1.5
LAPTM4A-202ENST00000483117 BRMS1Q9HCU9 246 aa5.67□□□□□ -1.5
LAPTM4A-202ENST00000483117 EBF1Q9UH73 591 aa5.67□□□□□ -1.5
LAPTM4A-202ENST00000483117 RBM47A0AV96 593 aaKnown RBP5.66□□□□□ -1.5
LAPTM4A-202ENST00000483117 SLC22A31A6NKX4 558 aa5.66□□□□□ -1.5
LAPTM4A-202ENST00000483117 RGS13O14921 159 aa5.66□□□□□ -1.5
LAPTM4A-202ENST00000483117 UBOX5O94941 541 aa5.66□□□□□ -1.5
LAPTM4A-202ENST00000483117 ERCC3P19447 782 aa5.66□□□□□ -1.5
LAPTM4A-202ENST00000483117 BUD31P41223 144 aaPredicted RBP5.66□□□□□ -1.5
LAPTM4A-202ENST00000483117 TEKQ02763 1124 aa5.66□□□□□ -1.5
LAPTM4A-202ENST00000483117 CLEC16AQ2KHT3 1053 aa5.66□□□□□ -1.5
LAPTM4A-202ENST00000483117 LRRC56Q8IYG6 542 aaPredicted RBP5.66□□□□□ -1.5
LAPTM4A-202ENST00000483117 PCDHB14Q9Y5E9 798 aa5.66□□□□□ -1.5
LAPTM4A-202ENST00000483117 NPIPB6E9PJ23 425 aa5.65□□□□□ -1.5
LAPTM4A-202ENST00000483117 GREM1O60565 184 aa5.65□□□□□ -1.5
LAPTM4A-202ENST00000483117 TMEM253P0C7T8 217 aa5.65□□□□□ -1.5
LAPTM4A-202ENST00000483117 EIF4A3P38919 411 aaKnown RBP5.65□□□□□ -1.5
LAPTM4A-202ENST00000483117 CHMP4BP1P59074 171 aa5.65□□□□□ -1.5
LAPTM4A-202ENST00000483117 CWF19L2Q2TBE0 894 aaKnown RBP5.65□□□□□ -1.5
LAPTM4A-202ENST00000483117 ATG14Q6ZNE5 492 aa5.65□□□□□ -1.5
LAPTM4A-202ENST00000483117 LCNL1Q6ZST4 164 aa5.65□□□□□ -1.5
LAPTM4A-202ENST00000483117 LILRA2Q8N149 483 aa5.65□□□□□ -1.5
LAPTM4A-202ENST00000483117 OXR1Q8N573 874 aa5.65□□□□□ -1.5
LAPTM4A-202ENST00000483117 DHX38Q92620 1227 aaKnown RBP5.65□□□□□ -1.5
LAPTM4A-202ENST00000483117 KCNQ5Q9NR82 932 aa5.65□□□□□ -1.5
LAPTM4A-202ENST00000483117 SUPT16HQ9Y5B9 1047 aaKnown RBP5.65□□□□□ -1.5
LAPTM4A-202ENST00000483117 FITM1A5D6W6 292 aa5.64□□□□□ -1.51
LAPTM4A-202ENST00000483117 ETV2O00321 342 aaPredicted RBP5.64□□□□□ -1.51
LAPTM4A-202ENST00000483117 RAG1P15918 1043 aa5.64□□□□□ -1.51
LAPTM4A-202ENST00000483117 POLR2BP30876 1174 aaKnown RBP5.64□□□□□ -1.51
LAPTM4A-202ENST00000483117 ITGAEP38570 1179 aa5.64□□□□□ -1.51
LAPTM4A-202ENST00000483117 CRKP46108 304 aa5.64□□□□□ -1.51
LAPTM4A-202ENST00000483117 GALK1P51570 392 aa5.64□□□□□ -1.51
LAPTM4A-202ENST00000483117 KRTAP19-4Q3LI73 84 aa5.64□□□□□ -1.51
LAPTM4A-202ENST00000483117 ZSCAN18Q8TBC5 510 aaPredicted RBP5.64□□□□□ -1.51
LAPTM4A-202ENST00000483117 GIPC2Q8TF65 315 aa5.64□□□□□ -1.51
LAPTM4A-202ENST00000483117 ZNF296Q8WUU4 475 aaPredicted RBP5.64□□□□□ -1.51
LAPTM4A-202ENST00000483117 KCNN1Q92952 543 aa5.64□□□□□ -1.51
LAPTM4A-202ENST00000483117 SYTL4Q96C24 671 aaPredicted RBP5.64□□□□□ -1.51
LAPTM4A-202ENST00000483117 BCL2L13Q9BXK5 485 aa5.64□□□□□ -1.51
LAPTM4A-202ENST00000483117 LRRC3Q9BY71 257 aa5.64□□□□□ -1.51
LAPTM4A-202ENST00000483117 ATE1O95260 518 aa5.63□□□□□ -1.51
LAPTM4A-202ENST00000483117 ZSCAN22P10073 491 aaPredicted RBP5.63□□□□□ -1.51
LAPTM4A-202ENST00000483117 NMIQ13287 307 aaPredicted RBP5.63□□□□□ -1.51
LAPTM4A-202ENST00000483117 SNW1Q13573 536 aaKnown RBP5.63□□□□□ -1.51
LAPTM4A-202ENST00000483117 MLECQ14165 292 aa5.63□□□□□ -1.51
LAPTM4A-202ENST00000483117 NR0B2Q15466 257 aa5.63□□□□□ -1.51
LAPTM4A-202ENST00000483117 KCNA10Q16322 511 aa5.63□□□□□ -1.51
LAPTM4A-202ENST00000483117 OVOS1Q6IE37 1185 aa5.63□□□□□ -1.51
LAPTM4A-202ENST00000483117 LILRA6Q6PI73 481 aa5.63□□□□□ -1.51
LAPTM4A-202ENST00000483117 TMC3Q7Z5M5 1100 aa5.63□□□□□ -1.51
LAPTM4A-202ENST00000483117 USHBP1Q8N6Y0 703 aa5.63□□□□□ -1.51
LAPTM4A-202ENST00000483117 G6PC3Q9BUM1 346 aa5.63□□□□□ -1.51
LAPTM4A-202ENST00000483117 HDAC8Q9BY41 377 aa5.63□□□□□ -1.51
LAPTM4A-202ENST00000483117 ASCC2Q9H1I8 757 aaPredicted RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms