RNA–Protein interactions for RNA: ENST00000483060.1

SGIP1-210, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-210ENST00000483060 TMC7Q7Z402 723 aa7.55□□□□□ -1.2
SGIP1-210ENST00000483060 SYTL4Q96C24 671 aaPredicted RBP7.55□□□□□ -1.2
SGIP1-210ENST00000483060 GCM1Q9NP62 436 aa7.55□□□□□ -1.2
SGIP1-210ENST00000483060 DUSP13Q9UII6 198 aa7.55□□□□□ -1.2
SGIP1-210ENST00000483060 WASHC2CQ9Y4E1 1318 aa7.54□□□□□ -1.2
SGIP1-210ENST00000483060 WASH4PA8MWX3 477 aa7.54□□□□□ -1.2
SGIP1-210ENST00000483060 GRK4P32298 578 aa7.54□□□□□ -1.2
SGIP1-210ENST00000483060 EGR3Q06889 387 aa7.54□□□□□ -1.2
SGIP1-210ENST00000483060 SNX17Q15036 470 aa7.54□□□□□ -1.2
SGIP1-210ENST00000483060 PRRT2Q7Z6L0 340 aaPredicted RBP7.54□□□□□ -1.2
SGIP1-210ENST00000483060 SPPL2CQ8IUH8 684 aa7.54□□□□□ -1.2
SGIP1-210ENST00000483060 GPATCH2Q9NW75 528 aa7.54□□□□□ -1.2
SGIP1-210ENST00000483060 TACC3Q9Y6A5 838 aa7.54□□□□□ -1.2
SGIP1-210ENST00000483060 BAZ1AQ9NRL2 1556 aaPredicted RBP7.54□□□□□ -1.2
SGIP1-210ENST00000483060 GIPC1O14908 333 aa7.53□□□□□ -1.2
SGIP1-210ENST00000483060 PDE6BP35913 854 aa7.53□□□□□ -1.2
SGIP1-210ENST00000483060 PLCB3Q01970 1234 aa7.53□□□□□ -1.2
SGIP1-210ENST00000483060 SND1Q7KZF4 910 aaKnown RBP eCLIP7.53□□□□□ -1.2
SGIP1-210ENST00000483060 Q96M66 194 aa7.53□□□□□ -1.2
SGIP1-210ENST00000483060 GZF1Q9H116 711 aaPredicted RBP7.53□□□□□ -1.2
SGIP1-210ENST00000483060 ZBTB7CA1YPR0 619 aa7.52□□□□□ -1.21
SGIP1-210ENST00000483060 CELA3AP09093 270 aa7.52□□□□□ -1.21
SGIP1-210ENST00000483060 CHRNEQ04844 493 aa7.52□□□□□ -1.21
SGIP1-210ENST00000483060 DSC3Q14574 896 aa7.52□□□□□ -1.21
SGIP1-210ENST00000483060 SKOR2Q2VWA4 1001 aaPredicted RBP7.52□□□□□ -1.21
SGIP1-210ENST00000483060 TIGD5Q53EQ6 642 aa7.52□□□□□ -1.21
SGIP1-210ENST00000483060 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.52□□□□□ -1.21
SGIP1-210ENST00000483060 MRPL41Q8IXM3 137 aaKnown RBP7.52□□□□□ -1.21
SGIP1-210ENST00000483060 FBF1Q8TES7 1133 aa7.52□□□□□ -1.21
SGIP1-210ENST00000483060 GAL3ST3Q96A11 431 aa7.52□□□□□ -1.21
SGIP1-210ENST00000483060 PKNOX2Q96KN3 472 aa7.52□□□□□ -1.21
SGIP1-210ENST00000483060 GPR62Q9BZJ7 368 aa7.52□□□□□ -1.21
SGIP1-210ENST00000483060 XYLT2Q9H1B5 865 aa7.52□□□□□ -1.21
SGIP1-210ENST00000483060 BIN2Q9UBW5 565 aaPredicted RBP7.52□□□□□ -1.21
SGIP1-210ENST00000483060 CLIP1P30622 1438 aa7.52□□□□□ -1.21
SGIP1-210ENST00000483060 RRBP1Q9P2E9 1410 aaKnown RBP7.52□□□□□ -1.21
SGIP1-210ENST00000483060 CELA3BP08861 270 aa7.51□□□□□ -1.21
SGIP1-210ENST00000483060 TSPYL5Q86VY4 417 aaPredicted RBP7.51□□□□□ -1.21
SGIP1-210ENST00000483060 SGPP1Q9BX95 441 aa7.51□□□□□ -1.21
SGIP1-210ENST00000483060 SLC6A19Q695T7 634 aa7.5□□□□□ -1.21
SGIP1-210ENST00000483060 GGNQ86UU5 652 aa7.5□□□□□ -1.21
SGIP1-210ENST00000483060 OSBPL7Q9BZF2 842 aa7.5□□□□□ -1.21
SGIP1-210ENST00000483060 DCTN4Q9UJW0 460 aa7.5□□□□□ -1.21
SGIP1-210ENST00000483060 TREHO43280 583 aa7.49□□□□□ -1.21
SGIP1-210ENST00000483060 ADRB1P08588 477 aa7.49□□□□□ -1.21
SGIP1-210ENST00000483060 LTKP29376 864 aa7.49□□□□□ -1.21
SGIP1-210ENST00000483060 KRTAP10-2P60368 255 aa7.49□□□□□ -1.21
SGIP1-210ENST00000483060 DUSP4Q13115 394 aa7.49□□□□□ -1.21
SGIP1-210ENST00000483060 SSPNQ14714 243 aa7.49□□□□□ -1.21
SGIP1-210ENST00000483060 SV2BQ7L1I2 683 aa7.49□□□□□ -1.21
SGIP1-210ENST00000483060 FAM43AQ8N2R8 423 aa7.49□□□□□ -1.21
SGIP1-210ENST00000483060 ANKS4BQ8N8V4 417 aa7.49□□□□□ -1.21
SGIP1-210ENST00000483060 SIGLEC10Q96LC7 697 aa7.49□□□□□ -1.21
SGIP1-210ENST00000483060 TJP2Q9UDY2 1190 aa7.49□□□□□ -1.21
SGIP1-210ENST00000483060 GPR160Q9UJ42 338 aa7.49□□□□□ -1.21
SGIP1-210ENST00000483060 KCNH3Q9ULD8 1083 aa7.49□□□□□ -1.21
SGIP1-210ENST00000483060 IRAK3Q9Y616 596 aa7.49□□□□□ -1.21
SGIP1-210ENST00000483060 OTOL1A6NHN0 477 aaPredicted RBP7.48□□□□□ -1.21
SGIP1-210ENST00000483060 CDK8P49336 464 aa7.48□□□□□ -1.21
SGIP1-210ENST00000483060 NFKB2Q00653 900 aa7.48□□□□□ -1.21
SGIP1-210ENST00000483060 DNAJB8Q8NHS0 232 aa7.48□□□□□ -1.21
SGIP1-210ENST00000483060 TMEM87BQ96K49 555 aa7.48□□□□□ -1.21
SGIP1-210ENST00000483060 CEP131Q9UPN4 1083 aa7.48□□□□□ -1.21
SGIP1-210ENST00000483060 OR14I1A6ND48 311 aa7.47□□□□□ -1.21
SGIP1-210ENST00000483060 RBAK-RBAKDNI3L0D1 243 aa7.47□□□□□ -1.21
SGIP1-210ENST00000483060 GFRA2O00451 464 aa7.47□□□□□ -1.21
SGIP1-210ENST00000483060 PGRP06401 933 aa7.47□□□□□ -1.21
SGIP1-210ENST00000483060 PI3P19957 117 aa7.47□□□□□ -1.21
SGIP1-210ENST00000483060 DPH2Q9BQC3 489 aaPredicted RBP7.47□□□□□ -1.21
SGIP1-210ENST00000483060 PCDHA11Q9Y5I1 949 aa7.47□□□□□ -1.21
SGIP1-210ENST00000483060 SMARCA2P51531 1590 aa7.46□□□□□ -1.21
SGIP1-210ENST00000483060 HRKO00198 91 aa7.46□□□□□ -1.22
SGIP1-210ENST00000483060 AFF3P51826 1226 aaKnown RBP7.46□□□□□ -1.22
SGIP1-210ENST00000483060 TTBK2Q6IQ55 1244 aa7.46□□□□□ -1.22
SGIP1-210ENST00000483060 DTWD2Q8NBA8 298 aa7.46□□□□□ -1.22
SGIP1-210ENST00000483060 PPP1R13LQ8WUF5 828 aa7.46□□□□□ -1.22
SGIP1-210ENST00000483060 DACT3Q96B18 629 aaPredicted RBP7.46□□□□□ -1.22
SGIP1-210ENST00000483060 MAPK1P28482 360 aa7.45□□□□□ -1.22
SGIP1-210ENST00000483060 ITGAEP38570 1179 aa7.45□□□□□ -1.22
SGIP1-210ENST00000483060 PDE4BQ07343 736 aa7.45□□□□□ -1.22
SGIP1-210ENST00000483060 SHISA4Q96DD7 197 aa7.45□□□□□ -1.22
SGIP1-210ENST00000483060 FAM8A1Q9UBU6 413 aa7.45□□□□□ -1.22
SGIP1-210ENST00000483060 CCDC88BA6NC98 1476 aa7.44□□□□□ -1.22
SGIP1-210ENST00000483060 TOP2AP11388 1531 aaKnown RBP7.44□□□□□ -1.22
SGIP1-210ENST00000483060 MAP3K1Q13233 1512 aa7.44□□□□□ -1.22
SGIP1-210ENST00000483060 TCERG1O14776 1098 aaKnown RBP7.44□□□□□ -1.22
SGIP1-210ENST00000483060 PSPNO60542 156 aa7.44□□□□□ -1.22
SGIP1-210ENST00000483060 LMNB1P20700 586 aa7.44□□□□□ -1.22
SGIP1-210ENST00000483060 RPS26P62854 115 aaKnown RBP7.44□□□□□ -1.22
SGIP1-210ENST00000483060 SRSF3P84103 164 aaKnown RBP7.44□□□□□ -1.22
SGIP1-210ENST00000483060 DDX10Q13206 875 aaKnown RBP7.44□□□□□ -1.22
SGIP1-210ENST00000483060 ALG1LQ6GMV1 187 aa7.44□□□□□ -1.22
SGIP1-210ENST00000483060 MCATQ8IVS2 390 aaKnown RBP7.44□□□□□ -1.22
SGIP1-210ENST00000483060 SP8Q8IXZ3 490 aa7.44□□□□□ -1.22
SGIP1-210ENST00000483060 PANK1Q8TE04 598 aa7.44□□□□□ -1.22
SGIP1-210ENST00000483060 TMPRSS5Q9H3S3 457 aa7.44□□□□□ -1.22
SGIP1-210ENST00000483060 SIRT5Q9NXA8 310 aa7.44□□□□□ -1.22
SGIP1-210ENST00000483060 MBD1Q9UIS9 605 aaPredicted RBP7.44□□□□□ -1.22
SGIP1-210ENST00000483060 SLC22A31A6NKX4 558 aa7.43□□□□□ -1.22
SGIP1-210ENST00000483060 RRP9O43818 475 aaKnown RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms