RNA–Protein interactions for RNA: ENST00000482965.1

SNX4-205, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-205ENST00000482965 HOXA7P31268 230 aaPredicted RBP10.39□□□□□ -0.75
SNX4-205ENST00000482965 USP17L24Q0WX57 530 aa10.39□□□□□ -0.75
SNX4-205ENST00000482965 KIF22Q14807 665 aa10.39□□□□□ -0.75
SNX4-205ENST00000482965 IMMTQ16891 758 aaKnown RBP10.39□□□□□ -0.75
SNX4-205ENST00000482965 AKNAD1Q5T1N1 836 aa10.39□□□□□ -0.75
SNX4-205ENST00000482965 CASC1Q6TDU7 716 aa10.39□□□□□ -0.75
SNX4-205ENST00000482965 C17orf99Q6UX52 265 aa10.39□□□□□ -0.75
SNX4-205ENST00000482965 MFSD6Q6ZSS7 791 aa10.39□□□□□ -0.75
SNX4-205ENST00000482965 CTU1Q7Z7A3 348 aaKnown RBP10.39□□□□□ -0.75
SNX4-205ENST00000482965 SIAH1Q8IUQ4 282 aa10.39□□□□□ -0.75
SNX4-205ENST00000482965 NEDD1Q8NHV4 660 aa10.39□□□□□ -0.75
SNX4-205ENST00000482965 CEP95Q96GE4 821 aa10.39□□□□□ -0.75
SNX4-205ENST00000482965 RNF41Q9H4P4 317 aaPredicted RBP10.39□□□□□ -0.75
SNX4-205ENST00000482965 RPAP3Q9H6T3 665 aaPredicted RBP10.39□□□□□ -0.75
SNX4-205ENST00000482965 VCPKMTQ9H867 229 aa10.39□□□□□ -0.75
SNX4-205ENST00000482965 GOPCQ9HD26 462 aa10.39□□□□□ -0.75
SNX4-205ENST00000482965 NYAP2Q9P242 653 aa10.39□□□□□ -0.75
SNX4-205ENST00000482965 ZSWIM8A7E2V4 1837 aa10.39□□□□□ -0.75
SNX4-205ENST00000482965 IGKV6D-41A0A0C4DH26 115 aa10.38□□□□□ -0.75
SNX4-205ENST00000482965 RAD21O60216 631 aa10.38□□□□□ -0.75
SNX4-205ENST00000482965 CDC45O75419 566 aa10.38□□□□□ -0.75
SNX4-205ENST00000482965 ECM2O94769 699 aaPredicted RBP10.38□□□□□ -0.75
SNX4-205ENST00000482965 FGRP09769 529 aa10.38□□□□□ -0.75
SNX4-205ENST00000482965 BCRP11274 1271 aa10.38□□□□□ -0.75
SNX4-205ENST00000482965 PCP11498 1178 aaKnown RBP10.38□□□□□ -0.75
SNX4-205ENST00000482965 GCLCP48506 637 aaPredicted RBP10.38□□□□□ -0.75
SNX4-205ENST00000482965 PTH1RQ03431 593 aa10.38□□□□□ -0.75
SNX4-205ENST00000482965 ARHGEF6Q15052 776 aa10.38□□□□□ -0.75
SNX4-205ENST00000482965 PPP4R3BQ5MIZ7 849 aa10.38□□□□□ -0.75
SNX4-205ENST00000482965 KIAA1211Q6ZU35 1233 aa10.38□□□□□ -0.75
SNX4-205ENST00000482965 TBC1D10CQ8IV04 446 aa10.38□□□□□ -0.75
SNX4-205ENST00000482965 SPICE1Q8N0Z3 855 aa10.38□□□□□ -0.75
SNX4-205ENST00000482965 STAG1Q8WVM7 1258 aa10.38□□□□□ -0.75
SNX4-205ENST00000482965 LPAR1Q92633 364 aa10.38□□□□□ -0.75
SNX4-205ENST00000482965 P2RX7Q99572 595 aaKnown RBP10.38□□□□□ -0.75
SNX4-205ENST00000482965 ESYT1Q9BSJ8 1104 aa10.38□□□□□ -0.75
SNX4-205ENST00000482965 NBPF3Q9H094 633 aa10.38□□□□□ -0.75
SNX4-205ENST00000482965 MTMR4Q9NYA4 1195 aa10.38□□□□□ -0.75
SNX4-205ENST00000482965 CLIP2Q9UDT6 1046 aa10.38□□□□□ -0.75
SNX4-205ENST00000482965 TRIM17Q9Y577 477 aa10.38□□□□□ -0.75
SNX4-205ENST00000482965 TACC3Q9Y6A5 838 aa10.38□□□□□ -0.75
SNX4-205ENST00000482965 DOCK3Q8IZD9 2030 aa10.38□□□□□ -0.75
SNX4-205ENST00000482965 TTLL1O95922 423 aa10.37□□□□□ -0.75
SNX4-205ENST00000482965 HERVK_113P62684 666 aa10.37□□□□□ -0.75
SNX4-205ENST00000482965 LACTBP83111 547 aaPredicted RBP10.37□□□□□ -0.75
SNX4-205ENST00000482965 KIAA1755Q5JYT7 1200 aa10.37□□□□□ -0.75
SNX4-205ENST00000482965 CATSPERGQ6ZRH7 1159 aa10.37□□□□□ -0.75
SNX4-205ENST00000482965 ANKRD13CQ8N6S4 541 aa10.37□□□□□ -0.75
SNX4-205ENST00000482965 GTF3C2Q8WUA4 911 aaPredicted RBP10.37□□□□□ -0.75
SNX4-205ENST00000482965 TANGO6Q9C0B7 1094 aa10.37□□□□□ -0.75
SNX4-205ENST00000482965 MCOLN1Q9GZU1 580 aa10.37□□□□□ -0.75
SNX4-205ENST00000482965 EFCC1Q9HA90 598 aa10.37□□□□□ -0.75
SNX4-205ENST00000482965 PARP14Q460N5 1801 aa10.37□□□□□ -0.75
SNX4-205ENST00000482965 NEDD4P46934 1319 aa10.36□□□□□ -0.75
SNX4-205ENST00000482965 WDR46O15213 610 aaKnown RBP10.36□□□□□ -0.75
SNX4-205ENST00000482965 PKN2Q16513 984 aaKnown RBP10.36□□□□□ -0.75
SNX4-205ENST00000482965 FAM110CQ1W6H9 321 aa10.36□□□□□ -0.75
SNX4-205ENST00000482965 OTOP1Q7RTM1 612 aa10.36□□□□□ -0.75
SNX4-205ENST00000482965 LRRC47Q8N1G4 583 aaKnown RBP10.36□□□□□ -0.75
SNX4-205ENST00000482965 ESR2Q92731 530 aa10.36□□□□□ -0.75
SNX4-205ENST00000482965 PAGR1Q9BTK6 254 aa10.36□□□□□ -0.75
SNX4-205ENST00000482965 ARHGAP39Q9C0H5 1083 aa10.36□□□□□ -0.75
SNX4-205ENST00000482965 ANO2Q9NQ90 1003 aa10.36□□□□□ -0.75
SNX4-205ENST00000482965 STX8Q9UNK0 236 aa10.36□□□□□ -0.75
SNX4-205ENST00000482965 RLFQ13129 1914 aa10.36□□□□□ -0.75
SNX4-205ENST00000482965 F5H6K3 240 aa10.35□□□□□ -0.75
SNX4-205ENST00000482965 NMT2O60551 498 aa10.35□□□□□ -0.75
SNX4-205ENST00000482965 FLOT1O75955 427 aa10.35□□□□□ -0.75
SNX4-205ENST00000482965 FMNL1O95466 1100 aaPredicted RBP10.35□□□□□ -0.75
SNX4-205ENST00000482965 NDUFB10O96000 172 aa10.35□□□□□ -0.75
SNX4-205ENST00000482965 PSMC4P43686 418 aa10.35□□□□□ -0.75
SNX4-205ENST00000482965 NT5C2P49902 561 aa10.35□□□□□ -0.75
SNX4-205ENST00000482965 FCGRTP55899 365 aa10.35□□□□□ -0.75
SNX4-205ENST00000482965 CAP1Q01518 475 aa10.35□□□□□ -0.75
SNX4-205ENST00000482965 KLRC3Q07444 240 aa10.35□□□□□ -0.75
SNX4-205ENST00000482965 COG2Q14746 738 aa10.35□□□□□ -0.75
SNX4-205ENST00000482965 FAM83BQ5T0W9 1011 aa10.35□□□□□ -0.75
SNX4-205ENST00000482965 MAP4K1Q92918 833 aa10.35□□□□□ -0.75
SNX4-205ENST00000482965 MKL1Q969V6 931 aa10.35□□□□□ -0.75
SNX4-205ENST00000482965 KRT23Q9C075 422 aa10.35□□□□□ -0.75
SNX4-205ENST00000482965 LSG1Q9H089 658 aaKnown RBP10.35□□□□□ -0.75
SNX4-205ENST00000482965 CNNM2Q9H8M5 875 aa10.35□□□□□ -0.75
SNX4-205ENST00000482965 IL17RBQ9NRM6 502 aa10.35□□□□□ -0.75
SNX4-205ENST00000482965 MORF4L1Q9UBU8 362 aa10.35□□□□□ -0.75
SNX4-205ENST00000482965 ISY1Q9ULR0 285 aaKnown RBP10.35□□□□□ -0.75
SNX4-205ENST00000482965 SYNPO2Q9UMS6 1093 aa10.35□□□□□ -0.75
SNX4-205ENST00000482965 RBM8AQ9Y5S9 174 aaKnown RBP10.35□□□□□ -0.75
SNX4-205ENST00000482965 COL11A1P12107 1806 aaPredicted RBP10.35□□□□□ -0.75
SNX4-205ENST00000482965 SPDYE16A6NNV3 312 aaPredicted RBP10.34□□□□□ -0.75
SNX4-205ENST00000482965 B4E1Z4 1266 aa10.34□□□□□ -0.75
SNX4-205ENST00000482965 KDM4AO75164 1064 aa10.34□□□□□ -0.75
SNX4-205ENST00000482965 GNRH1P01148 92 aa10.34□□□□□ -0.75
SNX4-205ENST00000482965 CYP21A2P08686 494 aa10.34□□□□□ -0.75
SNX4-205ENST00000482965 HOXD10P28358 340 aa10.34□□□□□ -0.75
SNX4-205ENST00000482965 TRDNQ13061 729 aa10.34□□□□□ -0.75
SNX4-205ENST00000482965 SLFN13Q68D06 897 aa10.34□□□□□ -0.75
SNX4-205ENST00000482965 FBXO46Q6PJ61 603 aaPredicted RBP10.34□□□□□ -0.75
SNX4-205ENST00000482965 IQCA1Q86XH1 822 aa10.34□□□□□ -0.75
SNX4-205ENST00000482965 GMCL1P1Q8NEA9 526 aa10.34□□□□□ -0.75
SNX4-205ENST00000482965 GPRC5AQ8NFJ5 357 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms