RNA–Protein interactions for RNA: ENST00000482873.6

DDR1-244, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 2,673 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-244ENST00000482873 FAM237AA0A1B0GTK4 181 aa17.32■□□□□ 0.36
DDR1-244ENST00000482873 FMR1Q06787 632 aaKnown RBP eCLIP17.32■□□□□ 0.363e-7■■■□□ 15.5
DDR1-244ENST00000482873 MTF1Q14872 753 aa17.32■□□□□ 0.36
DDR1-244ENST00000482873 ZNF174Q15697 407 aa17.32■□□□□ 0.36
DDR1-244ENST00000482873 KLHL10Q6JEL2 608 aa17.32■□□□□ 0.36
DDR1-244ENST00000482873 CCDC12Q8WUD4 166 aaPredicted RBP17.32■□□□□ 0.36
DDR1-244ENST00000482873 GOLGA1Q92805 767 aa17.32■□□□□ 0.36
DDR1-244ENST00000482873 ZSCAN10Q96SZ4 725 aaPredicted RBP17.32■□□□□ 0.36
DDR1-244ENST00000482873 RNF41Q9H4P4 317 aaPredicted RBP17.32■□□□□ 0.36
DDR1-244ENST00000482873 MRPL44Q9H9J2 332 aaKnown RBP17.32■□□□□ 0.36
DDR1-244ENST00000482873 GNL3LQ9NVN8 582 aaKnown RBP17.32■□□□□ 0.36
DDR1-244ENST00000482873 TXLNAP40222 546 aa17.31■□□□□ 0.36
DDR1-244ENST00000482873 MECOMQ03112 1051 aa17.31■□□□□ 0.36
DDR1-244ENST00000482873 SEC23AQ15436 765 aa17.31■□□□□ 0.36
DDR1-244ENST00000482873 SPECC1LQ69YQ0 1117 aa17.31■□□□□ 0.36
DDR1-244ENST00000482873 C8orf37Q96NL8 207 aa17.31■□□□□ 0.36
DDR1-244ENST00000482873 LMAN1P49257 510 aa17.31■□□□□ 0.36
DDR1-244ENST00000482873 STX17P56962 302 aa17.31■□□□□ 0.36
DDR1-244ENST00000482873 CTR9Q6PD62 1173 aa17.31■□□□□ 0.36
DDR1-244ENST00000482873 SMYD4Q8IYR2 804 aaPredicted RBP17.31■□□□□ 0.36
DDR1-244ENST00000482873 WASF1Q92558 559 aa17.31■□□□□ 0.36
DDR1-244ENST00000482873 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.31■□□□□ 0.36
DDR1-244ENST00000482873 A0A087X0B3 334 aa17.3■□□□□ 0.36
DDR1-244ENST00000482873 CCDC151A5D8V7 595 aa17.3■□□□□ 0.36
DDR1-244ENST00000482873 MAP2K7O14733 419 aa17.3■□□□□ 0.36
DDR1-244ENST00000482873 TRIM66O15016 1216 aa17.3■□□□□ 0.36
DDR1-244ENST00000482873 MYO1BO43795 1136 aa17.3■□□□□ 0.36
DDR1-244ENST00000482873 PKN1Q16512 942 aa17.3■□□□□ 0.36
DDR1-244ENST00000482873 MAN1B1Q9UKM7 699 aa17.3■□□□□ 0.36
DDR1-244ENST00000482873 NFE2L3Q9Y4A8 694 aa17.3■□□□□ 0.36
DDR1-244ENST00000482873 POSTNQ15063 836 aa17.3■□□□□ 0.36
DDR1-244ENST00000482873 EXOC4Q96A65 974 aa17.3■□□□□ 0.36
DDR1-244ENST00000482873 A0A0U1RQJ8 604 aa17.29■□□□□ 0.36
DDR1-244ENST00000482873 MYO1CO00159 1063 aa17.29■□□□□ 0.36
DDR1-244ENST00000482873 ZNF18P17022 549 aa17.29■□□□□ 0.36
DDR1-244ENST00000482873 PTPREP23469 700 aa17.29■□□□□ 0.36
DDR1-244ENST00000482873 MDM2Q00987 491 aaPredicted RBP17.29■□□□□ 0.36
DDR1-244ENST00000482873 NBPF5PQ86XG9 351 aaPredicted RBP17.29■□□□□ 0.36
DDR1-244ENST00000482873 ATRIPQ8WXE1 791 aa17.29■□□□□ 0.36
DDR1-244ENST00000482873 BSDC1Q9NW68 430 aaPredicted RBP17.29■□□□□ 0.36
DDR1-244ENST00000482873 GNPATO15228 680 aa17.29■□□□□ 0.36
DDR1-244ENST00000482873 CDC25AP30304 524 aa17.29■□□□□ 0.36
DDR1-244ENST00000482873 SAMSN1Q9NSI8 373 aaKnown RBP17.29■□□□□ 0.36
DDR1-244ENST00000482873 SPATA31A5Q5VU36 1347 aa17.29■□□□□ 0.36
DDR1-244ENST00000482873 SPATA31A7Q8IWB4 1347 aa17.29■□□□□ 0.36
DDR1-244ENST00000482873 STK36Q9NRP7 1315 aa17.29■□□□□ 0.36
DDR1-244ENST00000482873 COL16A1Q07092 1604 aaPredicted RBP17.29■□□□□ 0.36
DDR1-244ENST00000482873 CCDC196A0A1B0GTZ2 297 aa17.28■□□□□ 0.36
DDR1-244ENST00000482873 RILPL1Q5EBL4 403 aa17.28■□□□□ 0.36
DDR1-244ENST00000482873 CATIPQ7Z7H3 387 aa17.28■□□□□ 0.36
DDR1-244ENST00000482873 MED15Q96RN5 788 aa17.28■□□□□ 0.36
DDR1-244ENST00000482873 COL14A1Q05707 1796 aaKnown RBP17.28■□□□□ 0.36
DDR1-244ENST00000482873 SOWAHDA6NJG2 315 aa17.28■□□□□ 0.36
DDR1-244ENST00000482873 USP17L8P0C7I0 530 aa17.28■□□□□ 0.36
DDR1-244ENST00000482873 CHMP4BP1P59074 171 aa17.28■□□□□ 0.36
DDR1-244ENST00000482873 RPS8P62241 208 aaKnown RBP17.28■□□□□ 0.36
DDR1-244ENST00000482873 MCM6Q14566 821 aa17.28■□□□□ 0.36
DDR1-244ENST00000482873 C10orf67Q8IYJ2 551 aa17.28■□□□□ 0.36
DDR1-244ENST00000482873 GOLGA5Q8TBA6 731 aa17.28■□□□□ 0.36
DDR1-244ENST00000482873 NSUN4Q96CB9 384 aaKnown RBP17.28■□□□□ 0.36
DDR1-244ENST00000482873 FOXP1Q9H334 677 aaPredicted RBP17.28■□□□□ 0.36
DDR1-244ENST00000482873 ANKZF1Q9H8Y5 726 aa17.28■□□□□ 0.36
DDR1-244ENST00000482873 LZTFL1Q9NQ48 299 aa17.28■□□□□ 0.36
DDR1-244ENST00000482873 PSD3Q9NYI0 1048 aa17.28■□□□□ 0.36
DDR1-244ENST00000482873 PUF60Q9UHX1 559 aaKnown RBP17.28■□□□□ 0.36
DDR1-244ENST00000482873 ZNF804BA4D1E1 1349 aa17.28■□□□□ 0.36
DDR1-244ENST00000482873 BAZ2AQ9UIF9 1905 aaKnown RBP17.27■□□□□ 0.36
DDR1-244ENST00000482873 UBE4AQ14139 1066 aa17.27■□□□□ 0.36
DDR1-244ENST00000482873 IQCA1Q86XH1 822 aa17.27■□□□□ 0.36
DDR1-244ENST00000482873 PDE11AQ9HCR9 933 aa17.27■□□□□ 0.36
DDR1-244ENST00000482873 BRD3Q15059 726 aa17.27■□□□□ 0.35
DDR1-244ENST00000482873 BEND6Q5SZJ8 279 aaPredicted RBP17.27■□□□□ 0.35
DDR1-244ENST00000482873 JAKMIP3Q5VZ66 844 aa17.27■□□□□ 0.35
DDR1-244ENST00000482873 TMTC2Q8N394 836 aa17.27■□□□□ 0.35
DDR1-244ENST00000482873 DYNLL2Q96FJ2 89 aa17.27■□□□□ 0.35
DDR1-244ENST00000482873 SETDB2Q96T68 719 aa17.27■□□□□ 0.35
DDR1-244ENST00000482873 RASSF4Q9H2L5 321 aa17.27■□□□□ 0.35
DDR1-244ENST00000482873 DDX60Q8IY21 1712 aaKnown RBP17.27■□□□□ 0.35
DDR1-244ENST00000482873 TROAPQ12815 778 aa17.26■□□□□ 0.35
DDR1-244ENST00000482873 SRGAP1Q7Z6B7 1085 aa17.26■□□□□ 0.35
DDR1-244ENST00000482873 SRBD1Q8N5C6 995 aaKnown RBP17.26■□□□□ 0.35
DDR1-244ENST00000482873 SUGCTQ9HAC7 445 aa17.26■□□□□ 0.35
DDR1-244ENST00000482873 MYH2Q9UKX2 1941 aa17.26■□□□□ 0.35
DDR1-244ENST00000482873 HIBADHP31937 336 aaKnown RBP17.26■□□□□ 0.35
DDR1-244ENST00000482873 RASGRP4Q8TDF6 673 aa17.26■□□□□ 0.35
DDR1-244ENST00000482873 NGLY1Q96IV0 654 aa17.26■□□□□ 0.35
DDR1-244ENST00000482873 NLRP3Q96P20 1036 aa17.26■□□□□ 0.35
DDR1-244ENST00000482873 PNKPQ96T60 521 aa17.26■□□□□ 0.35
DDR1-244ENST00000482873 CDCA7Q9BWT1 371 aaPredicted RBP17.26■□□□□ 0.35
DDR1-244ENST00000482873 BLZF1Q9H2G9 400 aa17.26■□□□□ 0.35
DDR1-244ENST00000482873 DCP1AQ9NPI6 582 aaPredicted RBP17.26■□□□□ 0.35
DDR1-244ENST00000482873 MCM9Q9NXL9 1143 aa17.26■□□□□ 0.35
DDR1-244ENST00000482873 TFRCP02786 760 aaKnown RBP17.25■□□□□ 0.35
DDR1-244ENST00000482873 CCDC175P0C221 793 aa17.25■□□□□ 0.35
DDR1-244ENST00000482873 ACTN2P35609 894 aa17.25■□□□□ 0.35
DDR1-244ENST00000482873 DIXDC1Q155Q3 683 aa17.25■□□□□ 0.35
DDR1-244ENST00000482873 GRIK5Q16478 980 aa17.25■□□□□ 0.35
DDR1-244ENST00000482873 PIK3AP1Q6ZUJ8 805 aa17.25■□□□□ 0.35
DDR1-244ENST00000482873 RASGRP2Q7LDG7 609 aa17.25■□□□□ 0.35
DDR1-244ENST00000482873 SYMPKQ92797 1274 aaKnown RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms