RNA–Protein interactions for RNA: ENST00000482785.1

SHQ1-208, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 3

Gene SHQ1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-208ENST00000482785 CRKLP46109 303 aaKnown RBP5.17□□□□□ -1.58
SHQ1-208ENST00000482785 SMTNP53814 917 aa5.17□□□□□ -1.58
SHQ1-208ENST00000482785 CCDC144BQ3MJ40 725 aa5.17□□□□□ -1.58
SHQ1-208ENST00000482785 TBC1D10BQ4KMP7 808 aaPredicted RBP5.17□□□□□ -1.58
SHQ1-208ENST00000482785 SPRYD7Q5W111 196 aa5.17□□□□□ -1.58
SHQ1-208ENST00000482785 LIAT1Q6ZQX7 453 aa5.17□□□□□ -1.58
SHQ1-208ENST00000482785 CYP2U1Q7Z449 544 aa5.17□□□□□ -1.58
SHQ1-208ENST00000482785 ATOH1Q92858 354 aaPredicted RBP5.17□□□□□ -1.58
SHQ1-208ENST00000482785 MASTLQ96GX5 879 aa5.17□□□□□ -1.58
SHQ1-208ENST00000482785 SETDB2Q96T68 719 aa5.17□□□□□ -1.58
SHQ1-208ENST00000482785 DDX41Q9UJV9 622 aaKnown RBP5.17□□□□□ -1.58
SHQ1-208ENST00000482785 LRFN2Q9ULH4 789 aa5.17□□□□□ -1.58
SHQ1-208ENST00000482785 POLIQ9UNA4 740 aa5.17□□□□□ -1.58
SHQ1-208ENST00000482785 SPG7Q9UQ90 795 aa5.17□□□□□ -1.58
SHQ1-208ENST00000482785 INPP5FQ9Y2H2 1132 aa5.17□□□□□ -1.58
SHQ1-208ENST00000482785 SCN7AQ01118 1682 aa5.17□□□□□ -1.58
SHQ1-208ENST00000482785 DDX60LQ5H9U9 1706 aaKnown RBP5.17□□□□□ -1.58
SHQ1-208ENST00000482785 LAMB1P07942 1786 aa5.16□□□□□ -1.58
SHQ1-208ENST00000482785 SMG1Q96Q15 3661 aaKnown RBP5.16□□□□□ -1.58
SHQ1-208ENST00000482785 KMT2EQ8IZD2 1858 aa5.16□□□□□ -1.58
SHQ1-208ENST00000482785 CDK2AP1O14519 115 aa5.16□□□□□ -1.58
SHQ1-208ENST00000482785 STAU1O95793 577 aaKnown RBP5.16□□□□□ -1.58
SHQ1-208ENST00000482785 PCSK2P16519 638 aa5.16□□□□□ -1.58
SHQ1-208ENST00000482785 TNNI2P48788 182 aa5.16□□□□□ -1.58
SHQ1-208ENST00000482785 PRR5LQ6MZQ0 368 aa5.16□□□□□ -1.58
SHQ1-208ENST00000482785 PRR23BQ6ZRT6 265 aa5.16□□□□□ -1.58
SHQ1-208ENST00000482785 ATCAYQ86WG3 371 aa5.16□□□□□ -1.58
SHQ1-208ENST00000482785 VPS37DQ86XT2 251 aa5.16□□□□□ -1.58
SHQ1-208ENST00000482785 MFSD14AQ96MC6 490 aa5.16□□□□□ -1.58
SHQ1-208ENST00000482785 DEFB118Q96PH6 123 aa5.16□□□□□ -1.58
SHQ1-208ENST00000482785 PSMD1Q99460 953 aa5.16□□□□□ -1.58
SHQ1-208ENST00000482785 DNAJC25Q9H1X3 360 aa5.16□□□□□ -1.58
SHQ1-208ENST00000482785 ALG13Q9NP73 1137 aaKnown RBP5.16□□□□□ -1.58
SHQ1-208ENST00000482785 IQSEC3Q9UPP2 1182 aaPredicted RBP5.16□□□□□ -1.58
SHQ1-208ENST00000482785 RIPOR2Q9Y4F9 1068 aa5.16□□□□□ -1.58
SHQ1-208ENST00000482785 ASTN2O75129 1339 aaPredicted RBP5.16□□□□□ -1.58
SHQ1-208ENST00000482785 PLXNA1Q9UIW2 1896 aa5.15□□□□□ -1.58
SHQ1-208ENST00000482785 SPTA1P02549 2419 aa5.15□□□□□ -1.58
SHQ1-208ENST00000482785 CD163L1Q9NR16 1453 aa5.15□□□□□ -1.58
SHQ1-208ENST00000482785 UBR5O95071 2799 aaPredicted RBP5.15□□□□□ -1.58
SHQ1-208ENST00000482785 MANSC4A6NHS7 340 aaPredicted RBP5.15□□□□□ -1.59
SHQ1-208ENST00000482785 ERC2O15083 957 aa5.15□□□□□ -1.59
SHQ1-208ENST00000482785 PDGFAP04085 211 aa5.15□□□□□ -1.59
SHQ1-208ENST00000482785 CTSHP09668 335 aa5.15□□□□□ -1.59
SHQ1-208ENST00000482785 RPIAP49247 311 aa5.15□□□□□ -1.59
SHQ1-208ENST00000482785 EIF5P55010 431 aaKnown RBP5.15□□□□□ -1.59
SHQ1-208ENST00000482785 WNT7BP56706 349 aa5.15□□□□□ -1.59
SHQ1-208ENST00000482785 DNM1Q05193 864 aaKnown RBP5.15□□□□□ -1.59
SHQ1-208ENST00000482785 PTPN12Q05209 780 aaKnown RBP5.15□□□□□ -1.59
SHQ1-208ENST00000482785 COL9A3Q14050 684 aaPredicted RBP5.15□□□□□ -1.59
SHQ1-208ENST00000482785 PUM1Q14671 1186 aaKnown RBP eCLIP5.15□□□□□ -1.59
SHQ1-208ENST00000482785 C11orf91Q3C1V1 193 aa5.15□□□□□ -1.59
SHQ1-208ENST00000482785 TBCELQ5QJ74 424 aa5.15□□□□□ -1.59
SHQ1-208ENST00000482785 FAM117BQ6P1L5 589 aa5.15□□□□□ -1.59
SHQ1-208ENST00000482785 HS2ST1Q7LGA3 356 aa5.15□□□□□ -1.59
SHQ1-208ENST00000482785 NIM1KQ8IY84 436 aa5.15□□□□□ -1.59
SHQ1-208ENST00000482785 ADSSL1Q8N142 457 aa5.15□□□□□ -1.59
SHQ1-208ENST00000482785 EHBP1Q8NDI1 1231 aa5.15□□□□□ -1.59
SHQ1-208ENST00000482785 SPATA18Q8TC71 538 aa5.15□□□□□ -1.59
SHQ1-208ENST00000482785 CDK15Q96Q40 435 aa5.15□□□□□ -1.59
SHQ1-208ENST00000482785 LBHD1Q9BQE6 289 aaPredicted RBP5.15□□□□□ -1.59
SHQ1-208ENST00000482785 TMOD3Q9NYL9 352 aa5.15□□□□□ -1.59
SHQ1-208ENST00000482785 SRPK3Q9UPE1 567 aa5.15□□□□□ -1.59
SHQ1-208ENST00000482785 LTBP2Q14767 1821 aa5.15□□□□□ -1.59
SHQ1-208ENST00000482785 MAP3K19Q56UN5 1328 aa5.15□□□□□ -1.59
SHQ1-208ENST00000482785 SERTM1A2A2V5 107 aa5.14□□□□□ -1.59
SHQ1-208ENST00000482785 H7C1D1 291 aa5.14□□□□□ -1.59
SHQ1-208ENST00000482785 GIPC1O14908 333 aa5.14□□□□□ -1.59
SHQ1-208ENST00000482785 RPLP1P05386 114 aaKnown RBP5.14□□□□□ -1.59
SHQ1-208ENST00000482785 EIF4BP23588 611 aaKnown RBP5.14□□□□□ -1.59
SHQ1-208ENST00000482785 ZAP70P43403 619 aa5.14□□□□□ -1.59
SHQ1-208ENST00000482785 INHBEP58166 350 aa5.14□□□□□ -1.59
SHQ1-208ENST00000482785 ARID5BQ14865 1188 aa5.14□□□□□ -1.59
SHQ1-208ENST00000482785 RTN1Q16799 776 aa5.14□□□□□ -1.59
SHQ1-208ENST00000482785 FAM26DQ5JW98 314 aa5.14□□□□□ -1.59
SHQ1-208ENST00000482785 MICALL1Q8N3F8 863 aa5.14□□□□□ -1.59
SHQ1-208ENST00000482785 EDEM1Q92611 657 aa5.14□□□□□ -1.59
SHQ1-208ENST00000482785 PTPN18Q99952 460 aa5.14□□□□□ -1.59
SHQ1-208ENST00000482785 TMPRSS4Q9NRS4 437 aa5.14□□□□□ -1.59
SHQ1-208ENST00000482785 GGA3Q9NZ52 723 aa5.14□□□□□ -1.59
SHQ1-208ENST00000482785 V9GY48 417 aaPredicted RBP5.14□□□□□ -1.59
SHQ1-208ENST00000482785 CEP295Q9C0D2 2601 aa5.14□□□□□ -1.59
SHQ1-208ENST00000482785 CDHR2Q9BYE9 1310 aa5.14□□□□□ -1.59
SHQ1-208ENST00000482785 PCDH11XQ9BZA7 1347 aa5.14□□□□□ -1.59
SHQ1-208ENST00000482785 PCDH11YQ9BZA8 1340 aa5.14□□□□□ -1.59
SHQ1-208ENST00000482785 A0A0G2JMZ2 1700 aa5.14□□□□□ -1.59
SHQ1-208ENST00000482785 LOC400499M0QZD8 3231 aa5.14□□□□□ -1.59
SHQ1-208ENST00000482785 EML1O00423 815 aa5.13□□□□□ -1.59
SHQ1-208ENST00000482785 EIF1AYO14602 144 aaKnown RBP5.13□□□□□ -1.59
SHQ1-208ENST00000482785 LILRA1O75019 489 aa5.13□□□□□ -1.59
SHQ1-208ENST00000482785 RAD17O75943 681 aa5.13□□□□□ -1.59
SHQ1-208ENST00000482785 FSHRP23945 695 aa5.13□□□□□ -1.59
SHQ1-208ENST00000482785 RACK1P63244 317 aaKnown RBP5.13□□□□□ -1.59
SHQ1-208ENST00000482785 UBXN2AP68543 259 aa5.13□□□□□ -1.59
SHQ1-208ENST00000482785 TEAD4Q15561 434 aa5.13□□□□□ -1.59
SHQ1-208ENST00000482785 ZNF394Q53GI3 561 aa5.13□□□□□ -1.59
SHQ1-208ENST00000482785 PRAMEF18Q5VWM3 479 aa5.13□□□□□ -1.59
SHQ1-208ENST00000482785 EGFLAMQ63HQ2 1017 aa5.13□□□□□ -1.59
SHQ1-208ENST00000482785 SDE2Q6IQ49 451 aa5.13□□□□□ -1.59
SHQ1-208ENST00000482785 ZNF662Q6ZS27 426 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms