RNA–Protein interactions for RNA: ENST00000482745.5

HLA-DQA1-206, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 2,135 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-206ENST00000482745 STAP2Q9UGK3 403 aa11.96□□□□□ -0.5
HLA-DQA1-206ENST00000482745 A0A1W2PRG0 241 aa11.95□□□□□ -0.5
HLA-DQA1-206ENST00000482745 DDX11L8A8MPP1 907 aa11.95□□□□□ -0.5
HLA-DQA1-206ENST00000482745 USP17L15C9J2P7 530 aa11.95□□□□□ -0.5
HLA-DQA1-206ENST00000482745 USP17L13C9JLJ4 530 aa11.95□□□□□ -0.5
HLA-DQA1-206ENST00000482745 USP17L11C9JVI0 530 aa11.95□□□□□ -0.5
HLA-DQA1-206ENST00000482745 USP17L18D6R9N7 530 aa11.95□□□□□ -0.5
HLA-DQA1-206ENST00000482745 USP17L22D6RA61 530 aa11.95□□□□□ -0.5
HLA-DQA1-206ENST00000482745 USP17L17D6RBQ6 530 aa11.95□□□□□ -0.5
HLA-DQA1-206ENST00000482745 USP17L19D6RCP7 530 aa11.95□□□□□ -0.5
HLA-DQA1-206ENST00000482745 USP17L20D6RJB6 530 aa11.95□□□□□ -0.5
HLA-DQA1-206ENST00000482745 ICA1Q05084 483 aa11.95□□□□□ -0.5
HLA-DQA1-206ENST00000482745 USP17L24Q0WX57 530 aa11.95□□□□□ -0.5
HLA-DQA1-206ENST00000482745 GIMAP6Q6P9H5 292 aa11.95□□□□□ -0.5
HLA-DQA1-206ENST00000482745 CCDC17Q96LX7 622 aa11.95□□□□□ -0.5
HLA-DQA1-206ENST00000482745 RPAP3Q9H6T3 665 aaPredicted RBP11.95□□□□□ -0.5
HLA-DQA1-206ENST00000482745 GRPEL1Q9HAV7 217 aa11.95□□□□□ -0.5
HLA-DQA1-206ENST00000482745 TXNRD2Q9NNW7 524 aa11.95□□□□□ -0.5
HLA-DQA1-206ENST00000482745 CHMP5Q9NZZ3 219 aa11.95□□□□□ -0.5
HLA-DQA1-206ENST00000482745 MORF4L1Q9UBU8 362 aa11.95□□□□□ -0.5
HLA-DQA1-206ENST00000482745 TRAK2O60296 914 aa11.95□□□□□ -0.5
HLA-DQA1-206ENST00000482745 SBK1Q52WX2 424 aa11.95□□□□□ -0.5
HLA-DQA1-206ENST00000482745 ZMYM1Q5SVZ6 1142 aa11.95□□□□□ -0.5
HLA-DQA1-206ENST00000482745 EVI5LQ96CN4 794 aa11.95□□□□□ -0.5
HLA-DQA1-206ENST00000482745 ARHGEF10LQ9HCE6 1279 aa11.95□□□□□ -0.5
HLA-DQA1-206ENST00000482745 ADCY3O60266 1144 aa11.94□□□□□ -0.5
HLA-DQA1-206ENST00000482745 EN2P19622 333 aaPredicted RBP11.94□□□□□ -0.5
HLA-DQA1-206ENST00000482745 ATP2B2Q01814 1243 aa11.94□□□□□ -0.5
HLA-DQA1-206ENST00000482745 CHD1LQ86WJ1 897 aa11.94□□□□□ -0.5
HLA-DQA1-206ENST00000482745 SLAIN1Q8ND83 568 aa11.94□□□□□ -0.5
HLA-DQA1-206ENST00000482745 GPRC5AQ8NFJ5 357 aa11.94□□□□□ -0.5
HLA-DQA1-206ENST00000482745 NACAP1Q9BZK3 213 aa11.94□□□□□ -0.5
HLA-DQA1-206ENST00000482745 ELNP15502 786 aa11.93□□□□□ -0.5
HLA-DQA1-206ENST00000482745 ERVK-9P63128 1117 aa11.93□□□□□ -0.5
HLA-DQA1-206ENST00000482745 ERVK-24P63145 666 aa11.93□□□□□ -0.5
HLA-DQA1-206ENST00000482745 MTFR1Q15390 333 aa11.93□□□□□ -0.5
HLA-DQA1-206ENST00000482745 CATSPERGQ6ZRH7 1159 aa11.93□□□□□ -0.5
HLA-DQA1-206ENST00000482745 CCDC129Q6ZRS4 1044 aa11.93□□□□□ -0.5
HLA-DQA1-206ENST00000482745 CCAR1Q8IX12 1150 aaKnown RBP11.93□□□□□ -0.5
HLA-DQA1-206ENST00000482745 IFNL3Q8IZI9 196 aa11.93□□□□□ -0.5
HLA-DQA1-206ENST00000482745 GTF3C2Q8WUA4 911 aaPredicted RBP11.93□□□□□ -0.5
HLA-DQA1-206ENST00000482745 TRIM44Q96DX7 344 aaPredicted RBP11.93□□□□□ -0.5
HLA-DQA1-206ENST00000482745 ROBO3Q96MS0 1386 aa11.93□□□□□ -0.5
HLA-DQA1-206ENST00000482745 TANGO6Q9C0B7 1094 aa11.93□□□□□ -0.5
HLA-DQA1-206ENST00000482745 SH2D4AQ9H788 454 aa11.93□□□□□ -0.5
HLA-DQA1-206ENST00000482745 MKNK2Q9HBH9 465 aa11.93□□□□□ -0.5
HLA-DQA1-206ENST00000482745 RBPJLQ9UBG7 517 aa11.93□□□□□ -0.5
HLA-DQA1-206ENST00000482745 TRIM6-TRIM34B2RNG4 842 aa11.93□□□□□ -0.5
HLA-DQA1-206ENST00000482745 PATL2C9JE40 543 aaKnown RBP11.93□□□□□ -0.5
HLA-DQA1-206ENST00000482745 NUCB1Q02818 461 aa11.93□□□□□ -0.5
HLA-DQA1-206ENST00000482745 SPICE1Q8N0Z3 855 aa11.93□□□□□ -0.5
HLA-DQA1-206ENST00000482745 NAPBQ9H115 298 aa11.93□□□□□ -0.5
HLA-DQA1-206ENST00000482745 PDE4DIPQ5VU43 2346 aa11.93□□□□□ -0.5
HLA-DQA1-206ENST00000482745 GREB1LQ9C091 1923 aaPredicted RBP11.93□□□□□ -0.5
HLA-DQA1-206ENST00000482745 PLXNB2O15031 1838 aa11.93□□□□□ -0.5
HLA-DQA1-206ENST00000482745 EEF2P13639 858 aaKnown RBP11.92□□□□□ -0.5
HLA-DQA1-206ENST00000482745 UBXN2AP68543 259 aa11.92□□□□□ -0.5
HLA-DQA1-206ENST00000482745 RILPL2Q969X0 211 aa11.92□□□□□ -0.5
HLA-DQA1-206ENST00000482745 CWC22Q9HCG8 908 aaKnown RBP11.92□□□□□ -0.5
HLA-DQA1-206ENST00000482745 MKI67P46013 3256 aaKnown RBP11.92□□□□□ -0.5
HLA-DQA1-206ENST00000482745 RAD21O60216 631 aa11.92□□□□□ -0.5
HLA-DQA1-206ENST00000482745 PRDM1O75626 825 aa11.92□□□□□ -0.5
HLA-DQA1-206ENST00000482745 RASA1P20936 1047 aa11.92□□□□□ -0.5
HLA-DQA1-206ENST00000482745 IRF5Q13568 498 aa11.92□□□□□ -0.5
HLA-DQA1-206ENST00000482745 Q3C1V9 767 aa11.92□□□□□ -0.5
HLA-DQA1-206ENST00000482745 KIAA1755Q5JYT7 1200 aa11.92□□□□□ -0.5
HLA-DQA1-206ENST00000482745 POTEEQ6S8J3 1075 aa11.92□□□□□ -0.5
HLA-DQA1-206ENST00000482745 SIAH1Q8IUQ4 282 aa11.92□□□□□ -0.5
HLA-DQA1-206ENST00000482745 GZF1Q9H116 711 aaPredicted RBP11.92□□□□□ -0.5
HLA-DQA1-206ENST00000482745 PORCNQ9H237 461 aa11.92□□□□□ -0.5
HLA-DQA1-206ENST00000482745 VCPKMTQ9H867 229 aa11.92□□□□□ -0.5
HLA-DQA1-206ENST00000482745 KANSL2Q9H9L4 492 aa11.92□□□□□ -0.5
HLA-DQA1-206ENST00000482745 TMX2Q9Y320 296 aa11.92□□□□□ -0.5
HLA-DQA1-206ENST00000482745 MYH4Q9Y623 1939 aa11.91□□□□□ -0.5
HLA-DQA1-206ENST00000482745 SPDYE16A6NNV3 312 aaPredicted RBP11.91□□□□□ -0.5
HLA-DQA1-206ENST00000482745 INHAP05111 366 aa11.91□□□□□ -0.5
HLA-DQA1-206ENST00000482745 CCL5P13501 91 aa11.91□□□□□ -0.5
HLA-DQA1-206ENST00000482745 MAPK4P31152 587 aa11.91□□□□□ -0.5
HLA-DQA1-206ENST00000482745 WDR78Q5VTH9 848 aa11.91□□□□□ -0.5
HLA-DQA1-206ENST00000482745 SAMD1Q6SPF0 538 aaPredicted RBP11.91□□□□□ -0.5
HLA-DQA1-206ENST00000482745 LPAR1Q92633 364 aa11.91□□□□□ -0.5
HLA-DQA1-206ENST00000482745 RNF208Q9H0X6 261 aa11.91□□□□□ -0.5
HLA-DQA1-206ENST00000482745 RABGAP1Q9Y3P9 1069 aa11.91□□□□□ -0.5
HLA-DQA1-206ENST00000482745 PARP14Q460N5 1801 aa11.9□□□□□ -0.5
HLA-DQA1-206ENST00000482745 CNMDO75829 334 aa11.9□□□□□ -0.5
HLA-DQA1-206ENST00000482745 PLEKHM2Q8IWE5 1019 aa11.9□□□□□ -0.5
HLA-DQA1-206ENST00000482745 PXYLP1Q8TE99 480 aa11.9□□□□□ -0.5
HLA-DQA1-206ENST00000482745 FAM227BQ96M60 508 aa11.9□□□□□ -0.5
HLA-DQA1-206ENST00000482745 ZNF287Q9HBT7 754 aa11.9□□□□□ -0.5
HLA-DQA1-206ENST00000482745 A0A0G2JMZ2 1700 aa11.9□□□□□ -0.5
HLA-DQA1-206ENST00000482745 RLFQ13129 1914 aa11.9□□□□□ -0.5
HLA-DQA1-206ENST00000482745 A0A0D9SFI3 127 aa11.9□□□□□ -0.5
HLA-DQA1-206ENST00000482745 FLOT1O75955 427 aa11.9□□□□□ -0.5
HLA-DQA1-206ENST00000482745 CYP2B6P20813 491 aa11.9□□□□□ -0.5
HLA-DQA1-206ENST00000482745 PTMSP20962 102 aa11.9□□□□□ -0.5
HLA-DQA1-206ENST00000482745 CCNA1P78396 465 aa11.9□□□□□ -0.5
HLA-DQA1-206ENST00000482745 PPARAQ07869 468 aa11.9□□□□□ -0.5
HLA-DQA1-206ENST00000482745 COG2Q14746 738 aa11.9□□□□□ -0.5
HLA-DQA1-206ENST00000482745 VPS53Q5VIR6 699 aa11.9□□□□□ -0.5
HLA-DQA1-206ENST00000482745 GPR142Q7Z601 462 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms