RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 NPHS2Q9NP85 383 aa9.12□□□□□ -0.95
CLK1-212ENST00000482590 TRPC5Q9UL62 973 aaPredicted RBP9.12□□□□□ -0.95
CLK1-212ENST00000482590 EP400Q96L91 3159 aa9.12□□□□□ -0.95
CLK1-212ENST00000482590 ABCC11Q96J66 1382 aa9.12□□□□□ -0.95
CLK1-212ENST00000482590 TRPM3Q9HCF6 1732 aaPredicted RBP9.11□□□□□ -0.95
CLK1-212ENST00000482590 DLC1Q96QB1 1528 aa9.11□□□□□ -0.95
CLK1-212ENST00000482590 SYNGAP1Q96PV0 1343 aa9.11□□□□□ -0.95
CLK1-212ENST00000482590 NRXN1Q9ULB1 1477 aa9.11□□□□□ -0.95
CLK1-212ENST00000482590 PDE3AQ14432 1141 aa9.11□□□□□ -0.95
CLK1-212ENST00000482590 ZNF574Q6ZN55 896 aaPredicted RBP9.11□□□□□ -0.95
CLK1-212ENST00000482590 GLI3P10071 1580 aa9.11□□□□□ -0.95
CLK1-212ENST00000482590 NRAPQ86VF7 1730 aa9.11□□□□□ -0.95
CLK1-212ENST00000482590 PLEKHH1Q9ULM0 1364 aa9.11□□□□□ -0.95
CLK1-212ENST00000482590 H3BRB1 525 aa9.1□□□□□ -0.95
CLK1-212ENST00000482590 NEFLP07196 543 aa9.1□□□□□ -0.95
CLK1-212ENST00000482590 C8AP07357 584 aa9.1□□□□□ -0.95
CLK1-212ENST00000482590 JAG1P78504 1218 aa9.1□□□□□ -0.95
CLK1-212ENST00000482590 XPCQ01831 940 aaPredicted RBP9.1□□□□□ -0.95
CLK1-212ENST00000482590 AP3B2Q13367 1082 aa9.1□□□□□ -0.95
CLK1-212ENST00000482590 WAPLQ7Z5K2 1190 aa9.1□□□□□ -0.95
CLK1-212ENST00000482590 SPRED2Q7Z698 418 aa9.1□□□□□ -0.95
CLK1-212ENST00000482590 WDR89Q96FK6 387 aaPredicted RBP9.1□□□□□ -0.95
CLK1-212ENST00000482590 TUT1Q9H6E5 874 aaKnown RBP9.1□□□□□ -0.95
CLK1-212ENST00000482590 ABCB6Q9NP58 842 aa9.1□□□□□ -0.95
CLK1-212ENST00000482590 SLC5A6Q9Y289 635 aa9.1□□□□□ -0.95
CLK1-212ENST00000482590 TNS3Q68CZ2 1445 aa9.1□□□□□ -0.95
CLK1-212ENST00000482590 CRYBG1Q9Y4K1 1723 aa9.1□□□□□ -0.95
CLK1-212ENST00000482590 ALS2Q96Q42 1657 aa9.1□□□□□ -0.95
CLK1-212ENST00000482590 CPNE3O75131 537 aaKnown RBP9.09□□□□□ -0.95
CLK1-212ENST00000482590 PAPLNO95428 1278 aa9.09□□□□□ -0.95
CLK1-212ENST00000482590 SERPINB4P48594 390 aa9.09□□□□□ -0.95
CLK1-212ENST00000482590 ARHGAP4P98171 946 aa9.09□□□□□ -0.95
CLK1-212ENST00000482590 PTPN12Q05209 780 aaKnown RBP9.09□□□□□ -0.95
CLK1-212ENST00000482590 LCE1DQ5T752 114 aa9.09□□□□□ -0.95
CLK1-212ENST00000482590 TMEM132EQ6IEE7 984 aa9.09□□□□□ -0.95
CLK1-212ENST00000482590 FAM129BQ96TA1 746 aa9.09□□□□□ -0.95
CLK1-212ENST00000482590 DHX57Q6P158 1386 aaKnown RBP9.09□□□□□ -0.95
CLK1-212ENST00000482590 TMPRSS2O15393 492 aa9.08□□□□□ -0.96
CLK1-212ENST00000482590 LIG1P18858 919 aa9.08□□□□□ -0.96
CLK1-212ENST00000482590 GLYCTKQ8IVS8 523 aa9.08□□□□□ -0.96
CLK1-212ENST00000482590 CCDC86Q9H6F5 360 aaKnown RBP9.08□□□□□ -0.96
CLK1-212ENST00000482590 CWC22Q9HCG8 908 aaKnown RBP9.08□□□□□ -0.96
CLK1-212ENST00000482590 BCL9LQ86UU0 1499 aa9.08□□□□□ -0.96
CLK1-212ENST00000482590 ADGRB1O14514 1584 aa9.07□□□□□ -0.96
CLK1-212ENST00000482590 COL14A1Q05707 1796 aaKnown RBP9.07□□□□□ -0.96
CLK1-212ENST00000482590 SLIT2O94813 1529 aa9.07□□□□□ -0.96
CLK1-212ENST00000482590 PHRF1Q9P1Y6 1649 aaKnown RBP9.07□□□□□ -0.96
CLK1-212ENST00000482590 FAAP100Q0VG06 881 aa9.07□□□□□ -0.96
CLK1-212ENST00000482590 PLCL1Q15111 1095 aa9.07□□□□□ -0.96
CLK1-212ENST00000482590 CYP27C1Q4G0S4 372 aa9.07□□□□□ -0.96
CLK1-212ENST00000482590 PRPF40BQ6NWY9 871 aaKnown RBP9.07□□□□□ -0.96
CLK1-212ENST00000482590 UBE2Q2Q8WVN8 375 aa9.07□□□□□ -0.96
CLK1-212ENST00000482590 SPATA32Q96LK8 384 aa9.07□□□□□ -0.96
CLK1-212ENST00000482590 CRIM1Q9NZV1 1036 aa9.07□□□□□ -0.96
CLK1-212ENST00000482590 KIAA1522Q9P206 1035 aaPredicted RBP9.07□□□□□ -0.96
CLK1-212ENST00000482590 RGPD1P0DJD0 1748 aa9.07□□□□□ -0.96
CLK1-212ENST00000482590 KIAA1210Q9ULL0 1709 aa9.07□□□□□ -0.96
CLK1-212ENST00000482590 RAB3GAP2Q9H2M9 1393 aa9.07□□□□□ -0.96
CLK1-212ENST00000482590 SPATA31A3Q5VYP0 1347 aa9.06□□□□□ -0.96
CLK1-212ENST00000482590 ANKARQ7Z5J8 1434 aa9.06□□□□□ -0.96
CLK1-212ENST00000482590 TULP4Q9NRJ4 1543 aa9.06□□□□□ -0.96
CLK1-212ENST00000482590 NDUFB5O43674 189 aa9.06□□□□□ -0.96
CLK1-212ENST00000482590 BNIP3Q12983 259 aa9.06□□□□□ -0.96
CLK1-212ENST00000482590 CDK5R2Q13319 367 aa9.06□□□□□ -0.96
CLK1-212ENST00000482590 ZNF792Q3KQV3 632 aa9.06□□□□□ -0.96
CLK1-212ENST00000482590 RPS26P11Q5JNZ5 115 aaPredicted RBP9.06□□□□□ -0.96
CLK1-212ENST00000482590 STK11IPQ8N1F8 1099 aa9.06□□□□□ -0.96
CLK1-212ENST00000482590 CCDC74AQ96AQ1 378 aa9.06□□□□□ -0.96
CLK1-212ENST00000482590 ZC3H12CQ9C0D7 883 aaKnown RBP9.06□□□□□ -0.96
CLK1-212ENST00000482590 EIF3AQ14152 1382 aaKnown RBP9.06□□□□□ -0.96
CLK1-212ENST00000482590 RALGAPBQ86X10 1494 aa9.06□□□□□ -0.96
CLK1-212ENST00000482590 TOPAZ1Q8N9V7 1692 aa9.06□□□□□ -0.96
CLK1-212ENST00000482590 ARHGEF10O15013 1369 aa9.05□□□□□ -0.96
CLK1-212ENST00000482590 TMEM238LA0A1B0GVL6 79 aa9.05□□□□□ -0.96
CLK1-212ENST00000482590 ZNF862O60290 1169 aa9.05□□□□□ -0.96
CLK1-212ENST00000482590 FAM87AP0C7U9 286 aa9.05□□□□□ -0.96
CLK1-212ENST00000482590 ZNF157P51786 506 aaPredicted RBP9.05□□□□□ -0.96
CLK1-212ENST00000482590 PDE3BQ13370 1112 aa9.05□□□□□ -0.96
CLK1-212ENST00000482590 SAFB2Q14151 953 aaKnown RBP eCLIP9.05□□□□□ -0.96
CLK1-212ENST00000482590 KRT28Q7Z3Y7 464 aa9.05□□□□□ -0.96
CLK1-212ENST00000482590 PLD6Q8N2A8 252 aaKnown RBP9.05□□□□□ -0.96
CLK1-212ENST00000482590 DRC1Q96MC2 740 aa9.05□□□□□ -0.96
CLK1-212ENST00000482590 FANCD2OSQ96PS1 177 aa9.05□□□□□ -0.96
CLK1-212ENST00000482590 C14orf93Q9H972 538 aaKnown RBP9.05□□□□□ -0.96
CLK1-212ENST00000482590 SBNO1A3KN83 1393 aa9.04□□□□□ -0.96
CLK1-212ENST00000482590 IGHA2P01877 340 aa9.04□□□□□ -0.96
CLK1-212ENST00000482590 FAM181AQ8N9Y4 354 aa9.04□□□□□ -0.96
CLK1-212ENST00000482590 GLIS3Q8NEA6 775 aa9.04□□□□□ -0.96
CLK1-212ENST00000482590 PRAM1Q96QH2 718 aa9.04□□□□□ -0.96
CLK1-212ENST00000482590 DISC1Q9NRI5 854 aa9.04□□□□□ -0.96
CLK1-212ENST00000482590 POGKQ9P215 609 aa9.04□□□□□ -0.96
CLK1-212ENST00000482590 U3KQE9 123 aa9.04□□□□□ -0.96
CLK1-212ENST00000482590 EIF1AYO14602 144 aaKnown RBP9.03□□□□□ -0.96
CLK1-212ENST00000482590 GPR182O15218 404 aa9.03□□□□□ -0.96
CLK1-212ENST00000482590 ID3Q02535 119 aa9.03□□□□□ -0.96
CLK1-212ENST00000482590 UNC5CLQ8IV45 518 aa9.03□□□□□ -0.96
CLK1-212ENST00000482590 NETO1Q8TDF5 533 aa9.03□□□□□ -0.96
CLK1-212ENST00000482590 MRRFQ96E11 262 aaKnown RBP9.03□□□□□ -0.96
CLK1-212ENST00000482590 MISP3Q96FF7 219 aa9.03□□□□□ -0.96
CLK1-212ENST00000482590 KRTAP4-7Q9BYR0 210 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms