RNA–Protein interactions for RNA: ENST00000482519.1

VAMP4-204, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 3

Gene VAMP4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-204ENST00000482519 KIAA1755Q5JYT7 1200 aa19.73■□□□□ 0.75
VAMP4-204ENST00000482519 VPS53Q5VIR6 699 aa19.73■□□□□ 0.75
VAMP4-204ENST00000482519 SAMD1Q6SPF0 538 aaPredicted RBP19.73■□□□□ 0.75
VAMP4-204ENST00000482519 GTF3C2Q8WUA4 911 aaPredicted RBP19.73■□□□□ 0.75
VAMP4-204ENST00000482519 TMX2Q9Y320 296 aa19.73■□□□□ 0.75
VAMP4-204ENST00000482519 DOCK3Q8IZD9 2030 aa19.73■□□□□ 0.75
VAMP4-204ENST00000482519 ELNP15502 786 aa19.72■□□□□ 0.75
VAMP4-204ENST00000482519 ERVK-9P63128 1117 aa19.72■□□□□ 0.75
VAMP4-204ENST00000482519 ERVK-24P63145 666 aa19.72■□□□□ 0.75
VAMP4-204ENST00000482519 PDE4BQ07343 736 aa19.72■□□□□ 0.75
VAMP4-204ENST00000482519 Q3C1V9 767 aa19.72■□□□□ 0.75
VAMP4-204ENST00000482519 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.72■□□□□ 0.75
VAMP4-204ENST00000482519 VCPKMTQ9H867 229 aa19.72■□□□□ 0.75
VAMP4-204ENST00000482519 CWC22Q9HCG8 908 aaKnown RBP19.72■□□□□ 0.75
VAMP4-204ENST00000482519 FOXP2O15409 715 aa19.71■□□□□ 0.75
VAMP4-204ENST00000482519 SDSP20132 328 aa19.71■□□□□ 0.75
VAMP4-204ENST00000482519 CTDSPL2Q05D32 466 aa19.71■□□□□ 0.75
VAMP4-204ENST00000482519 COG2Q14746 738 aa19.71■□□□□ 0.75
VAMP4-204ENST00000482519 POTEEQ6S8J3 1075 aa19.71■□□□□ 0.75
VAMP4-204ENST00000482519 SLAIN1Q8ND83 568 aa19.71■□□□□ 0.75
VAMP4-204ENST00000482519 LPAR1Q92633 364 aa19.71■□□□□ 0.75
VAMP4-204ENST00000482519 GOPCQ9HD26 462 aa19.71■□□□□ 0.75
VAMP4-204ENST00000482519 RABGAP1Q9Y3P9 1069 aa19.71■□□□□ 0.75
VAMP4-204ENST00000482519 KIAA0100Q14667 2235 aaKnown RBP19.7■□□□□ 0.74
VAMP4-204ENST00000482519 SPDYE16A6NNV3 312 aaPredicted RBP19.7■□□□□ 0.74
VAMP4-204ENST00000482519 FLOT1O75955 427 aa19.7■□□□□ 0.74
VAMP4-204ENST00000482519 PDE4AP27815 886 aa19.7■□□□□ 0.74
VAMP4-204ENST00000482519 MTFR1Q15390 333 aa19.7■□□□□ 0.74
VAMP4-204ENST00000482519 FAM47AQ5JRC9 791 aa19.7■□□□□ 0.74
VAMP4-204ENST00000482519 WDR78Q5VTH9 848 aa19.7■□□□□ 0.74
VAMP4-204ENST00000482519 TICAM2Q86XR7 235 aa19.7■□□□□ 0.74
VAMP4-204ENST00000482519 PORCNQ9H237 461 aa19.7■□□□□ 0.74
VAMP4-204ENST00000482519 DIAPH3Q9NSV4 1193 aa19.7■□□□□ 0.74
VAMP4-204ENST00000482519 HOXC10Q9NYD6 342 aa19.7■□□□□ 0.74
VAMP4-204ENST00000482519 CNMDO75829 334 aa19.69■□□□□ 0.74
VAMP4-204ENST00000482519 TSPY3P0CV98 308 aa19.69■□□□□ 0.74
VAMP4-204ENST00000482519 TSPY8P0CW00 308 aa19.69■□□□□ 0.74
VAMP4-204ENST00000482519 EN2P19622 333 aaPredicted RBP19.69■□□□□ 0.74
VAMP4-204ENST00000482519 MAPK4P31152 587 aa19.69■□□□□ 0.74
VAMP4-204ENST00000482519 UBXN2AP68543 259 aa19.69■□□□□ 0.74
VAMP4-204ENST00000482519 CWC27Q6UX04 472 aaKnown RBP19.69■□□□□ 0.74
VAMP4-204ENST00000482519 ZNF589Q86UQ0 364 aaPredicted RBP19.69■□□□□ 0.74
VAMP4-204ENST00000482519 INCENPQ9NQS7 918 aa19.69■□□□□ 0.74
VAMP4-204ENST00000482519 BTBD7Q9P203 1132 aa19.69■□□□□ 0.74
VAMP4-204ENST00000482519 CLIP2Q9UDT6 1046 aa19.69■□□□□ 0.74
VAMP4-204ENST00000482519 CCNA1P78396 465 aa19.68■□□□□ 0.74
VAMP4-204ENST00000482519 TFAP4Q01664 338 aa19.68■□□□□ 0.74
VAMP4-204ENST00000482519 IRF5Q13568 498 aa19.68■□□□□ 0.74
VAMP4-204ENST00000482519 CCDC171Q6TFL3 1326 aa19.68■□□□□ 0.74
VAMP4-204ENST00000482519 WDR46O15213 610 aaKnown RBP19.67■□□□□ 0.74
VAMP4-204ENST00000482519 FGAP02671 866 aa19.67■□□□□ 0.74
VAMP4-204ENST00000482519 INHAP05111 366 aa19.67■□□□□ 0.74
VAMP4-204ENST00000482519 HSPD1P10809 573 aaKnown RBP19.67■□□□□ 0.74
VAMP4-204ENST00000482519 CCL5P13501 91 aa19.67■□□□□ 0.74
VAMP4-204ENST00000482519 CYP2B6P20813 491 aa19.67■□□□□ 0.74
VAMP4-204ENST00000482519 GPR142Q7Z601 462 aa19.67■□□□□ 0.74
VAMP4-204ENST00000482519 PLEKHH3Q7Z736 793 aa19.67■□□□□ 0.74
VAMP4-204ENST00000482519 PXYLP1Q8TE99 480 aa19.67■□□□□ 0.74
VAMP4-204ENST00000482519 CEP95Q96GE4 821 aa19.67■□□□□ 0.74
VAMP4-204ENST00000482519 RNF208Q9H0X6 261 aa19.67■□□□□ 0.74
VAMP4-204ENST00000482519 TOMM22Q9NS69 142 aa19.67■□□□□ 0.74
VAMP4-204ENST00000482519 NYAP2Q9P242 653 aa19.67■□□□□ 0.74
VAMP4-204ENST00000482519 GJD2Q9UKL4 321 aa19.67■□□□□ 0.74
VAMP4-204ENST00000482519 GREB1LQ9C091 1923 aaPredicted RBP19.66■□□□□ 0.74
VAMP4-204ENST00000482519 MFAP1P55081 439 aaKnown RBP19.66■□□□□ 0.74
VAMP4-204ENST00000482519 PLS1Q14651 629 aa19.66■□□□□ 0.74
VAMP4-204ENST00000482519 ALX1Q15699 326 aa19.66■□□□□ 0.74
VAMP4-204ENST00000482519 FAM83BQ5T0W9 1011 aa19.66■□□□□ 0.74
VAMP4-204ENST00000482519 LBX2Q6XYB7 198 aa19.66■□□□□ 0.74
VAMP4-204ENST00000482519 NUP88Q99567 741 aaPredicted RBP19.66■□□□□ 0.74
VAMP4-204ENST00000482519 NUDT12Q9BQG2 462 aa19.66■□□□□ 0.74
VAMP4-204ENST00000482519 RBBP6Q7Z6E9 1792 aaKnown RBP19.65■□□□□ 0.74
VAMP4-204ENST00000482519 IGKV6D-41A0A0C4DH26 115 aa19.65■□□□□ 0.74
VAMP4-204ENST00000482519 TSPY2A6NKD2 308 aa19.65■□□□□ 0.74
VAMP4-204ENST00000482519 F5H6K3 240 aa19.65■□□□□ 0.74
VAMP4-204ENST00000482519 HIP1O00291 1037 aa19.65■□□□□ 0.74
VAMP4-204ENST00000482519 RANBP6O60518 1105 aaKnown RBP19.65■□□□□ 0.74
VAMP4-204ENST00000482519 DSG3P32926 999 aa19.65■□□□□ 0.74
VAMP4-204ENST00000482519 KLRC3Q07444 240 aa19.65■□□□□ 0.74
VAMP4-204ENST00000482519 RRP12Q5JTH9 1297 aaKnown RBP19.65■□□□□ 0.74
VAMP4-204ENST00000482519 TTC22Q5TAA0 569 aa19.65■□□□□ 0.74
VAMP4-204ENST00000482519 LRRC47Q8N1G4 583 aaKnown RBP19.65■□□□□ 0.74
VAMP4-204ENST00000482519 NEDD1Q8NHV4 660 aa19.65■□□□□ 0.74
VAMP4-204ENST00000482519 ATG4CQ96DT6 458 aa19.65■□□□□ 0.74
VAMP4-204ENST00000482519 UNC93B1Q9H1C4 597 aa19.65■□□□□ 0.74
VAMP4-204ENST00000482519 FBXO28Q9NVF7 368 aa19.65■□□□□ 0.74
VAMP4-204ENST00000482519 MTMR4Q9NYA4 1195 aa19.65■□□□□ 0.74
VAMP4-204ENST00000482519 TNRC18O15417 2968 aaPredicted RBP19.65■□□□□ 0.74
VAMP4-204ENST00000482519 MYH4Q9Y623 1939 aa19.64■□□□□ 0.74
VAMP4-204ENST00000482519 TTLL1O95922 423 aa19.64■□□□□ 0.73
VAMP4-204ENST00000482519 HAND2P61296 217 aa19.64■□□□□ 0.73
VAMP4-204ENST00000482519 SOCS4Q8WXH5 440 aa19.64■□□□□ 0.73
VAMP4-204ENST00000482519 CHMP4CQ96CF2 233 aa19.64■□□□□ 0.73
VAMP4-204ENST00000482519 ANAPC4Q9UJX5 808 aa19.64■□□□□ 0.73
VAMP4-204ENST00000482519 ISY1Q9ULR0 285 aaKnown RBP19.64■□□□□ 0.73
VAMP4-204ENST00000482519 IVNS1ABPQ9Y6Y0 642 aa19.64■□□□□ 0.73
VAMP4-204ENST00000482519 RLFQ13129 1914 aa19.63■□□□□ 0.73
VAMP4-204ENST00000482519 PLXNB2O15031 1838 aa19.63■□□□□ 0.73
VAMP4-204ENST00000482519 NDUFB10O96000 172 aa19.63■□□□□ 0.73
VAMP4-204ENST00000482519 MB21D1Q8N884 522 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms