RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 NLRP5P59047 1200 aa17.44■□□□□ 0.38
C9orf3-218ENST00000482056 CUL4BQ13620 913 aa17.44■□□□□ 0.38
C9orf3-218ENST00000482056 EARS2Q5JPH6 523 aaKnown RBP17.44■□□□□ 0.38
C9orf3-218ENST00000482056 FBXO33Q7Z6M2 555 aa17.44■□□□□ 0.38
C9orf3-218ENST00000482056 NSUN4Q96CB9 384 aaKnown RBP17.44■□□□□ 0.38
C9orf3-218ENST00000482056 ARPP21Q9UBL0 812 aaPredicted RBP17.44■□□□□ 0.38
C9orf3-218ENST00000482056 CASZ1Q86V15 1759 aa17.44■□□□□ 0.38
C9orf3-218ENST00000482056 NRAPQ86VF7 1730 aa17.44■□□□□ 0.38
C9orf3-218ENST00000482056 TADA3O75528 432 aa17.43■□□□□ 0.38
C9orf3-218ENST00000482056 SCG2P13521 617 aa17.43■□□□□ 0.38
C9orf3-218ENST00000482056 CALML3P27482 149 aa17.43■□□□□ 0.38
C9orf3-218ENST00000482056 PTGDRQ13258 359 aa17.43■□□□□ 0.38
C9orf3-218ENST00000482056 TOGARAM2Q6ZUX3 1019 aa17.43■□□□□ 0.38
C9orf3-218ENST00000482056 FAM177A1Q8N128 213 aaPredicted RBP17.43■□□□□ 0.38
C9orf3-218ENST00000482056 MED15Q96RN5 788 aa17.43■□□□□ 0.38
C9orf3-218ENST00000482056 CARD6Q9BX69 1037 aa17.43■□□□□ 0.38
C9orf3-218ENST00000482056 ANKRD2Q9GZV1 360 aa17.43■□□□□ 0.38
C9orf3-218ENST00000482056 COL4A1P02462 1669 aa17.43■□□□□ 0.38
C9orf3-218ENST00000482056 CDKAL1Q5VV42 579 aa17.42■□□□□ 0.38
C9orf3-218ENST00000482056 TMCO3Q6UWJ1 677 aa17.42■□□□□ 0.38
C9orf3-218ENST00000482056 IGSF22Q8N9C0 903 aa17.42■□□□□ 0.38
C9orf3-218ENST00000482056 LRRN4CLQ8ND94 238 aa17.42■□□□□ 0.38
C9orf3-218ENST00000482056 ANKRD20A12PQ8NF67 263 aa17.42■□□□□ 0.38
C9orf3-218ENST00000482056 CCDC51Q96ER9 411 aa17.42■□□□□ 0.38
C9orf3-218ENST00000482056 NYXQ9GZU5 481 aa17.42■□□□□ 0.38
C9orf3-218ENST00000482056 MAST2Q6P0Q8 1798 aa17.42■□□□□ 0.38
C9orf3-218ENST00000482056 ZNF831Q5JPB2 1677 aa17.42■□□□□ 0.38
C9orf3-218ENST00000482056 TXLNAP40222 546 aa17.42■□□□□ 0.38
C9orf3-218ENST00000482056 CLCN6P51797 869 aa17.42■□□□□ 0.38
C9orf3-218ENST00000482056 MECOMQ03112 1051 aa17.42■□□□□ 0.38
C9orf3-218ENST00000482056 PFKFB3Q16875 520 aaPredicted RBP17.42■□□□□ 0.38
C9orf3-218ENST00000482056 SBK1Q52WX2 424 aa17.42■□□□□ 0.38
C9orf3-218ENST00000482056 SLC10A5Q5PT55 438 aa17.42■□□□□ 0.38
C9orf3-218ENST00000482056 ZNF771Q7L3S4 317 aaPredicted RBP17.42■□□□□ 0.38
C9orf3-218ENST00000482056 SRBD1Q8N5C6 995 aaKnown RBP17.42■□□□□ 0.38
C9orf3-218ENST00000482056 DCP1AQ9NPI6 582 aaPredicted RBP17.42■□□□□ 0.38
C9orf3-218ENST00000482056 RMND1Q9NWS8 449 aa17.42■□□□□ 0.38
C9orf3-218ENST00000482056 SMIM22K7EJ46 135 aa17.41■□□□□ 0.38
C9orf3-218ENST00000482056 CD44P16070 742 aaKnown RBP17.41■□□□□ 0.38
C9orf3-218ENST00000482056 HIBADHP31937 336 aaKnown RBP17.41■□□□□ 0.38
C9orf3-218ENST00000482056 STX17P56962 302 aa17.41■□□□□ 0.38
C9orf3-218ENST00000482056 FAM193AP78312 1265 aa17.41■□□□□ 0.38
C9orf3-218ENST00000482056 MAP3K9P80192 1104 aa17.41■□□□□ 0.38
C9orf3-218ENST00000482056 SPAG1Q07617 926 aa17.41■□□□□ 0.38
C9orf3-218ENST00000482056 C3orf67Q6ZVT6 689 aa17.41■□□□□ 0.38
C9orf3-218ENST00000482056 CNGA4Q8IV77 575 aa17.41■□□□□ 0.38
C9orf3-218ENST00000482056 ZNF446Q9NWS9 450 aa17.41■□□□□ 0.38
C9orf3-218ENST00000482056 ADD3Q9UEY8 706 aaKnown RBP17.41■□□□□ 0.38
C9orf3-218ENST00000482056 CCDC88AQ3V6T2 1871 aa17.41■□□□□ 0.38
C9orf3-218ENST00000482056 ITIH6Q6UXX5 1313 aa17.41■□□□□ 0.38
C9orf3-218ENST00000482056 TAF1P21675 1872 aa17.41■□□□□ 0.38
C9orf3-218ENST00000482056 TSPY2A6NKD2 308 aa17.4■□□□□ 0.38
C9orf3-218ENST00000482056 PPP1R3GB7ZBB8 358 aa17.4■□□□□ 0.38
C9orf3-218ENST00000482056 GTPBP6O43824 516 aaPredicted RBP17.4■□□□□ 0.38
C9orf3-218ENST00000482056 NPY5RQ15761 445 aa17.4■□□□□ 0.38
C9orf3-218ENST00000482056 ARL6IP4Q66PJ3 421 aaKnown RBP17.4■□□□□ 0.38
C9orf3-218ENST00000482056 SPTY2D1Q68D10 685 aaPredicted RBP17.4■□□□□ 0.38
C9orf3-218ENST00000482056 PIK3AP1Q6ZUJ8 805 aa17.4■□□□□ 0.38
C9orf3-218ENST00000482056 ADAMTS2O95450 1211 aa17.4■□□□□ 0.38
C9orf3-218ENST00000482056 RPS8P62241 208 aaKnown RBP17.4■□□□□ 0.38
C9orf3-218ENST00000482056 PPP2R3AQ06190 1150 aa17.4■□□□□ 0.38
C9orf3-218ENST00000482056 RBL2Q08999 1139 aa17.4■□□□□ 0.38
C9orf3-218ENST00000482056 APTXQ7Z2E3 356 aaKnown RBP17.4■□□□□ 0.38
C9orf3-218ENST00000482056 ZNF384Q8TF68 577 aa17.4■□□□□ 0.38
C9orf3-218ENST00000482056 CELF1Q92879 486 aaKnown RBP17.4■□□□□ 0.38
C9orf3-218ENST00000482056 KAT14Q9H8E8 782 aa17.4■□□□□ 0.38
C9orf3-218ENST00000482056 SH3GLB2Q9NR46 395 aa17.4■□□□□ 0.38
C9orf3-218ENST00000482056 CTNND2Q9UQB3 1225 aa17.4■□□□□ 0.38
C9orf3-218ENST00000482056 MRFAP1Q9Y605 127 aa17.4■□□□□ 0.38
C9orf3-218ENST00000482056 TEX33O43247 280 aa17.39■□□□□ 0.37
C9orf3-218ENST00000482056 LONP1P36776 959 aaKnown RBP17.39■□□□□ 0.37
C9orf3-218ENST00000482056 PBX1P40424 430 aa17.39■□□□□ 0.37
C9orf3-218ENST00000482056 CCDC178Q5BJE1 867 aa17.39■□□□□ 0.37
C9orf3-218ENST00000482056 CREBRFQ8IUR6 639 aa17.39■□□□□ 0.37
C9orf3-218ENST00000482056 GPR161Q8N6U8 529 aaKnown RBP17.39■□□□□ 0.37
C9orf3-218ENST00000482056 NLRP3Q96P20 1036 aa17.39■□□□□ 0.37
C9orf3-218ENST00000482056 WDR24Q96S15 920 aa17.39■□□□□ 0.37
C9orf3-218ENST00000482056 RWDD2AQ9UIY3 292 aa17.39■□□□□ 0.37
C9orf3-218ENST00000482056 ZHX1Q9UKY1 873 aaPredicted RBP17.39■□□□□ 0.37
C9orf3-218ENST00000482056 SPATA31A5Q5VU36 1347 aa17.39■□□□□ 0.37
C9orf3-218ENST00000482056 SPATA31A7Q8IWB4 1347 aa17.39■□□□□ 0.37
C9orf3-218ENST00000482056 ATP8B1O43520 1251 aa17.39■□□□□ 0.37
C9orf3-218ENST00000482056 IGSF3O75054 1194 aa17.39■□□□□ 0.37
C9orf3-218ENST00000482056 MFAP3LO75121 409 aa17.39■□□□□ 0.37
C9orf3-218ENST00000482056 MCM7P33993 719 aa17.39■□□□□ 0.37
C9orf3-218ENST00000482056 TRIM14Q14142 442 aa17.39■□□□□ 0.37
C9orf3-218ENST00000482056 E2F4Q16254 413 aa17.39■□□□□ 0.37
C9orf3-218ENST00000482056 FAM47AQ5JRC9 791 aa17.39■□□□□ 0.37
C9orf3-218ENST00000482056 RRAGBQ5VZM2 374 aa17.39■□□□□ 0.37
C9orf3-218ENST00000482056 BICDL1Q6ZP65 573 aa17.39■□□□□ 0.37
C9orf3-218ENST00000482056 BARGINQ6ZT62 677 aa17.39■□□□□ 0.37
C9orf3-218ENST00000482056 CCDC12Q8WUD4 166 aaPredicted RBP17.39■□□□□ 0.37
C9orf3-218ENST00000482056 WTIPA6NIX2 430 aaPredicted RBP17.38■□□□□ 0.37
C9orf3-218ENST00000482056 WNT7AO00755 349 aa17.38■□□□□ 0.37
C9orf3-218ENST00000482056 FANCGO15287 622 aa17.38■□□□□ 0.37
C9orf3-218ENST00000482056 KIF5CO60282 957 aa17.38■□□□□ 0.37
C9orf3-218ENST00000482056 CASP1P29466 404 aa17.38■□□□□ 0.37
C9orf3-218ENST00000482056 PAK1Q13153 545 aa17.38■□□□□ 0.37
C9orf3-218ENST00000482056 TUBB2AQ13885 445 aa17.38■□□□□ 0.37
C9orf3-218ENST00000482056 KARSQ15046 597 aaKnown RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms