RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 TTC14Q96N46 770 aa13.58□□□□□ -0.23
HPS4-212ENST00000481910 CLIP2Q9UDT6 1046 aa13.58□□□□□ -0.23
HPS4-212ENST00000481910 ABT1Q9ULW3 272 aaKnown RBP13.58□□□□□ -0.23
HPS4-212ENST00000481910 ZHX2Q9Y6X8 837 aa13.58□□□□□ -0.23
HPS4-212ENST00000481910 GREB1LQ9C091 1923 aaPredicted RBP13.58□□□□□ -0.24
HPS4-212ENST00000481910 EEF2P13639 858 aaKnown RBP13.58□□□□□ -0.24
HPS4-212ENST00000481910 WTAPQ15007 396 aa13.58□□□□□ -0.24
HPS4-212ENST00000481910 Q6ZUG5 572 aa13.58□□□□□ -0.24
HPS4-212ENST00000481910 ERO1BQ86YB8 467 aa13.58□□□□□ -0.24
HPS4-212ENST00000481910 AS3MTQ9HBK9 375 aa13.58□□□□□ -0.24
HPS4-212ENST00000481910 SEC23AQ15436 765 aa13.57□□□□□ -0.24
HPS4-212ENST00000481910 IFIT1BQ5T764 474 aaKnown RBP13.57□□□□□ -0.24
HPS4-212ENST00000481910 RCSD1Q6JBY9 416 aa13.57□□□□□ -0.24
HPS4-212ENST00000481910 SIAH1Q8IUQ4 282 aa13.57□□□□□ -0.24
HPS4-212ENST00000481910 TMTC2Q8N394 836 aa13.57□□□□□ -0.24
HPS4-212ENST00000481910 OTUD5Q96G74 571 aa13.57□□□□□ -0.24
HPS4-212ENST00000481910 ARHGEF10LQ9HCE6 1279 aa13.57□□□□□ -0.24
HPS4-212ENST00000481910 GPHNQ9NQX3 736 aaPredicted RBP13.57□□□□□ -0.24
HPS4-212ENST00000481910 NYAP2Q9P242 653 aa13.57□□□□□ -0.24
HPS4-212ENST00000481910 TLL2Q9Y6L7 1015 aa13.57□□□□□ -0.24
HPS4-212ENST00000481910 SH2B2O14492 632 aaPredicted RBP13.56□□□□□ -0.24
HPS4-212ENST00000481910 APLP1P51693 650 aa13.56□□□□□ -0.24
HPS4-212ENST00000481910 PPATQ06203 517 aa13.56□□□□□ -0.24
HPS4-212ENST00000481910 SPP2Q13103 211 aa13.56□□□□□ -0.24
HPS4-212ENST00000481910 OPTNQ96CV9 577 aa13.56□□□□□ -0.24
HPS4-212ENST00000481910 MYH4Q9Y623 1939 aa13.56□□□□□ -0.24
HPS4-212ENST00000481910 SPDYE5A6NIY4 337 aa13.56□□□□□ -0.24
HPS4-212ENST00000481910 TRIM75PA6NK02 468 aa13.56□□□□□ -0.24
HPS4-212ENST00000481910 TOP1P11387 765 aaKnown RBP13.56□□□□□ -0.24
HPS4-212ENST00000481910 LIFRP42702 1097 aa13.56□□□□□ -0.24
HPS4-212ENST00000481910 ECE1P42892 770 aa13.56□□□□□ -0.24
HPS4-212ENST00000481910 AXDND1Q5T1B0 1012 aaPredicted RBP13.56□□□□□ -0.24
HPS4-212ENST00000481910 NFXL1Q6ZNB6 911 aa13.56□□□□□ -0.24
HPS4-212ENST00000481910 ZNF280CQ8ND82 737 aa13.56□□□□□ -0.24
HPS4-212ENST00000481910 ACER1Q8TDN7 264 aa13.56□□□□□ -0.24
HPS4-212ENST00000481910 ANKS1AQ92625 1134 aa13.56□□□□□ -0.24
HPS4-212ENST00000481910 BRF1Q92994 677 aa13.56□□□□□ -0.24
HPS4-212ENST00000481910 FEZ1Q99689 392 aa13.56□□□□□ -0.24
HPS4-212ENST00000481910 TMEM47Q9BQJ4 181 aa13.56□□□□□ -0.24
HPS4-212ENST00000481910 WDR18Q9BV38 432 aa13.56□□□□□ -0.24
HPS4-212ENST00000481910 TBC1D2Q9BYX2 928 aa13.56□□□□□ -0.24
HPS4-212ENST00000481910 KAT14Q9H8E8 782 aa13.56□□□□□ -0.24
HPS4-212ENST00000481910 LY9Q9HBG7 655 aa13.56□□□□□ -0.24
HPS4-212ENST00000481910 SENP2Q9HC62 589 aa13.56□□□□□ -0.24
HPS4-212ENST00000481910 AFG3L2Q9Y4W6 797 aa13.56□□□□□ -0.24
HPS4-212ENST00000481910 A0A1W2PRG0 241 aa13.55□□□□□ -0.24
HPS4-212ENST00000481910 CCDC69A6NI79 296 aa13.55□□□□□ -0.24
HPS4-212ENST00000481910 NOVP48745 357 aa13.55□□□□□ -0.24
HPS4-212ENST00000481910 ZNF157P51786 506 aaPredicted RBP13.55□□□□□ -0.24
HPS4-212ENST00000481910 RGMBQ6NW40 437 aa13.55□□□□□ -0.24
HPS4-212ENST00000481910 FBXL16Q8N461 479 aa13.55□□□□□ -0.24
HPS4-212ENST00000481910 MKL1Q969V6 931 aa13.55□□□□□ -0.24
HPS4-212ENST00000481910 PDCL3Q9H2J4 239 aa13.55□□□□□ -0.24
HPS4-212ENST00000481910 SH2D4AQ9H788 454 aa13.55□□□□□ -0.24
HPS4-212ENST00000481910 USP17L10C9JJH3 530 aa13.54□□□□□ -0.24
HPS4-212ENST00000481910 IRF6O14896 467 aa13.54□□□□□ -0.24
HPS4-212ENST00000481910 RAD21O60216 631 aa13.54□□□□□ -0.24
HPS4-212ENST00000481910 ST18O60284 1047 aa13.54□□□□□ -0.24
HPS4-212ENST00000481910 AK2P54819 239 aa13.54□□□□□ -0.24
HPS4-212ENST00000481910 TOB2Q14106 344 aaPredicted RBP13.54□□□□□ -0.24
HPS4-212ENST00000481910 ZYXQ15942 572 aaKnown RBP13.54□□□□□ -0.24
HPS4-212ENST00000481910 LRRC47Q8N1G4 583 aaKnown RBP13.54□□□□□ -0.24
HPS4-212ENST00000481910 LARP6Q9BRS8 491 aaKnown RBP13.54□□□□□ -0.24
HPS4-212ENST00000481910 AGXT2Q9BYV1 514 aa13.54□□□□□ -0.24
HPS4-212ENST00000481910 ALDH8A1Q9H2A2 487 aaPredicted RBP13.54□□□□□ -0.24
HPS4-212ENST00000481910 CREBZFQ9NS37 354 aa13.54□□□□□ -0.24
HPS4-212ENST00000481910 MTMR7Q9Y216 660 aa13.54□□□□□ -0.24
HPS4-212ENST00000481910 TMX2Q9Y320 296 aa13.54□□□□□ -0.24
HPS4-212ENST00000481910 PHIPQ8WWQ0 1821 aa13.54□□□□□ -0.24
HPS4-212ENST00000481910 HOXD11P31277 338 aaPredicted RBP13.54□□□□□ -0.24
HPS4-212ENST00000481910 BACE1P56817 501 aa13.54□□□□□ -0.24
HPS4-212ENST00000481910 MTMR2Q13614 643 aa13.54□□□□□ -0.24
HPS4-212ENST00000481910 ANKRD1Q15327 319 aa13.54□□□□□ -0.24
HPS4-212ENST00000481910 PNMA1Q8ND90 353 aa13.54□□□□□ -0.24
HPS4-212ENST00000481910 BRPF3Q9ULD4 1205 aa13.54□□□□□ -0.24
HPS4-212ENST00000481910 SLC12A7Q9Y666 1083 aa13.54□□□□□ -0.24
HPS4-212ENST00000481910 C19orf81C9J6K1 198 aa13.53□□□□□ -0.24
HPS4-212ENST00000481910 APOBRQ0VD83 1088 aa13.53□□□□□ -0.24
HPS4-212ENST00000481910 MKRN3Q13064 507 aaKnown RBP13.53□□□□□ -0.24
HPS4-212ENST00000481910 PPIL2Q13356 520 aa13.53□□□□□ -0.24
HPS4-212ENST00000481910 SYNE3Q6ZMZ3 975 aa13.53□□□□□ -0.24
HPS4-212ENST00000481910 NOL8Q76FK4 1167 aaKnown RBP13.53□□□□□ -0.24
HPS4-212ENST00000481910 CATIPQ7Z7H3 387 aa13.53□□□□□ -0.24
HPS4-212ENST00000481910 SGMS1Q86VZ5 419 aa13.53□□□□□ -0.24
HPS4-212ENST00000481910 CHMP4CQ96CF2 233 aa13.53□□□□□ -0.24
HPS4-212ENST00000481910 WNK4Q96J92 1243 aa13.53□□□□□ -0.24
HPS4-212ENST00000481910 HHIPL1Q96JK4 782 aa13.53□□□□□ -0.24
HPS4-212ENST00000481910 KIAA1683Q9H0B3 1180 aa13.53□□□□□ -0.24
HPS4-212ENST00000481910 GOPCQ9HD26 462 aa13.53□□□□□ -0.24
HPS4-212ENST00000481910 SYNPO2Q9UMS6 1093 aa13.53□□□□□ -0.24
HPS4-212ENST00000481910 KLF18A0A0U1RQI7 1052 aa13.52□□□□□ -0.24
HPS4-212ENST00000481910 F5H6K3 240 aa13.52□□□□□ -0.24
HPS4-212ENST00000481910 GJA5P36382 358 aa13.52□□□□□ -0.24
HPS4-212ENST00000481910 USP14P54578 494 aa13.52□□□□□ -0.24
HPS4-212ENST00000481910 KLRC3Q07444 240 aa13.52□□□□□ -0.24
HPS4-212ENST00000481910 SPRYD7Q5W111 196 aa13.52□□□□□ -0.24
HPS4-212ENST00000481910 CXCL11O14625 94 aa13.52□□□□□ -0.25
HPS4-212ENST00000481910 ZBTB48P10074 688 aaPredicted RBP13.52□□□□□ -0.25
HPS4-212ENST00000481910 HMGCS2P54868 508 aa13.52□□□□□ -0.25
HPS4-212ENST00000481910 ZNF654Q8IZM8 581 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms