RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 GPATCH3Q96I76 525 aa22.31■■□□□ 1.16
CLK1-211ENST00000481641 TANGO6Q9C0B7 1094 aa22.31■■□□□ 1.16
CLK1-211ENST00000481641 CACNB2Q08289 660 aaPredicted RBP22.3■■□□□ 1.16
CLK1-211ENST00000481641 CHRDL2Q6WN34 429 aa22.3■■□□□ 1.16
CLK1-211ENST00000481641 OTUD7AQ8TE49 926 aaPredicted RBP22.3■■□□□ 1.16
CLK1-211ENST00000481641 DDRGK1Q96HY6 314 aa22.3■■□□□ 1.16
CLK1-211ENST00000481641 PTPREP23469 700 aa22.29■■□□□ 1.16
CLK1-211ENST00000481641 RRP1P56182 461 aaKnown RBP22.29■■□□□ 1.16
CLK1-211ENST00000481641 MAP2K5Q13163 448 aa22.29■■□□□ 1.16
CLK1-211ENST00000481641 COG2Q14746 738 aa22.29■■□□□ 1.16
CLK1-211ENST00000481641 APBA2Q99767 749 aa22.29■■□□□ 1.16
CLK1-211ENST00000481641 ARHGEF10LQ9HCE6 1279 aa22.29■■□□□ 1.16
CLK1-211ENST00000481641 FLRT1Q9NZU1 646 aa22.29■■□□□ 1.16
CLK1-211ENST00000481641 TMX2Q9Y320 296 aa22.29■■□□□ 1.16
CLK1-211ENST00000481641 RLFQ13129 1914 aa22.29■■□□□ 1.16
CLK1-211ENST00000481641 TRIOBPQ9H2D6 2365 aa22.28■■□□□ 1.16
CLK1-211ENST00000481641 GSG1L2A8MUP6 293 aa22.28■■□□□ 1.16
CLK1-211ENST00000481641 RNF113AO15541 343 aaKnown RBP22.28■■□□□ 1.16
CLK1-211ENST00000481641 CCND3P30281 292 aaPredicted RBP22.28■■□□□ 1.16
CLK1-211ENST00000481641 MNX1P50219 401 aaPredicted RBP22.28■■□□□ 1.16
CLK1-211ENST00000481641 ATP2B2Q01814 1243 aa22.28■■□□□ 1.16
CLK1-211ENST00000481641 SAMD1Q6SPF0 538 aaPredicted RBP22.28■■□□□ 1.16
CLK1-211ENST00000481641 CCDC17Q96LX7 622 aa22.28■■□□□ 1.16
CLK1-211ENST00000481641 ALPK3Q96L96 1907 aa22.27■■□□□ 1.16
CLK1-211ENST00000481641 SLC15A5A6NIM6 579 aa22.27■■□□□ 1.16
CLK1-211ENST00000481641 M0R2C6 588 aa22.27■■□□□ 1.16
CLK1-211ENST00000481641 EEF2P13639 858 aaKnown RBP22.27■■□□□ 1.16
CLK1-211ENST00000481641 CAPN2P17655 700 aa22.27■■□□□ 1.16
CLK1-211ENST00000481641 NECAB2Q7Z6G3 386 aa22.27■■□□□ 1.16
CLK1-211ENST00000481641 TRMT44Q8IYL2 757 aaKnown RBP22.27■■□□□ 1.16
CLK1-211ENST00000481641 APPBP2Q92624 585 aa22.27■■□□□ 1.16
CLK1-211ENST00000481641 MOV10L1Q9BXT6 1211 aaKnown RBP22.27■■□□□ 1.16
CLK1-211ENST00000481641 VCPKMTQ9H867 229 aa22.27■■□□□ 1.16
CLK1-211ENST00000481641 HOXC10Q9NYD6 342 aa22.27■■□□□ 1.16
CLK1-211ENST00000481641 MINDY4BA8MYZ0 360 aa22.26■■□□□ 1.15
CLK1-211ENST00000481641 EVI5O60447 810 aa22.26■■□□□ 1.15
CLK1-211ENST00000481641 GLRX3O76003 335 aaKnown RBP22.26■■□□□ 1.15
CLK1-211ENST00000481641 DSG3P32926 999 aa22.26■■□□□ 1.15
CLK1-211ENST00000481641 FXR1P51114 621 aaKnown RBP eCLIP22.26■■□□□ 1.15
CLK1-211ENST00000481641 NPLOC4Q8TAT6 608 aa22.26■■□□□ 1.15
CLK1-211ENST00000481641 ATG4CQ96DT6 458 aa22.26■■□□□ 1.15
CLK1-211ENST00000481641 CRBNQ96SW2 442 aa22.26■■□□□ 1.15
CLK1-211ENST00000481641 ARPP21Q9UBL0 812 aaPredicted RBP22.26■■□□□ 1.15
CLK1-211ENST00000481641 OGDHLQ9ULD0 1010 aa22.26■■□□□ 1.15
CLK1-211ENST00000481641 NR2E3Q9Y5X4 410 aa22.26■■□□□ 1.15
CLK1-211ENST00000481641 IVNS1ABPQ9Y6Y0 642 aa22.26■■□□□ 1.15
CLK1-211ENST00000481641 GPAA1O43292 621 aa22.25■■□□□ 1.15
CLK1-211ENST00000481641 FLOT1O75955 427 aa22.25■■□□□ 1.15
CLK1-211ENST00000481641 GRB14Q14449 540 aa22.25■■□□□ 1.15
CLK1-211ENST00000481641 ANKLE1Q8NAG6 615 aa22.25■■□□□ 1.15
CLK1-211ENST00000481641 PI4K2BQ8TCG2 481 aa22.25■■□□□ 1.15
CLK1-211ENST00000481641 LPAR1Q92633 364 aa22.25■■□□□ 1.15
CLK1-211ENST00000481641 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.25■■□□□ 1.15
CLK1-211ENST00000481641 SPATC1LQ9H0A9 340 aa22.25■■□□□ 1.15
CLK1-211ENST00000481641 EPB41L4AQ9HCS5 686 aaPredicted RBP22.25■■□□□ 1.15
CLK1-211ENST00000481641 RBM27Q9P2N5 1060 aaKnown RBP22.25■■□□□ 1.15
CLK1-211ENST00000481641 PLS1Q14651 629 aa22.24■■□□□ 1.15
CLK1-211ENST00000481641 SBK1Q52WX2 424 aa22.24■■□□□ 1.15
CLK1-211ENST00000481641 SEC62Q99442 399 aaKnown RBP22.24■■□□□ 1.15
CLK1-211ENST00000481641 SH2D4AQ9H788 454 aa22.24■■□□□ 1.15
CLK1-211ENST00000481641 KANSL2Q9H9L4 492 aa22.24■■□□□ 1.15
CLK1-211ENST00000481641 A0A0G2JMZ2 1700 aa22.23■■□□□ 1.15
CLK1-211ENST00000481641 RAD21O60216 631 aa22.23■■□□□ 1.15
CLK1-211ENST00000481641 ERCC3P19447 782 aa22.23■■□□□ 1.15
CLK1-211ENST00000481641 RASA1P20936 1047 aa22.23■■□□□ 1.15
CLK1-211ENST00000481641 LHX8Q68G74 356 aa22.23■■□□□ 1.15
CLK1-211ENST00000481641 YTHDC1Q96MU7 727 aaKnown RBP22.23■■□□□ 1.15
CLK1-211ENST00000481641 NBPF3Q9H094 633 aa22.23■■□□□ 1.15
CLK1-211ENST00000481641 FBXO28Q9NVF7 368 aa22.23■■□□□ 1.15
CLK1-211ENST00000481641 TTC41PQ6P2S7 1318 aa22.23■■□□□ 1.15
CLK1-211ENST00000481641 WDR46O15213 610 aaKnown RBP22.22■■□□□ 1.15
CLK1-211ENST00000481641 APPP05067 770 aa22.22■■□□□ 1.15
CLK1-211ENST00000481641 ZFYP08048 801 aaPredicted RBP22.22■■□□□ 1.15
CLK1-211ENST00000481641 MFSD14CQ5VZR4 134 aa22.22■■□□□ 1.15
CLK1-211ENST00000481641 GIMAP6Q6P9H5 292 aa22.22■■□□□ 1.15
CLK1-211ENST00000481641 C11orf49Q9H6J7 331 aa22.22■■□□□ 1.15
CLK1-211ENST00000481641 MKNK2Q9HBH9 465 aa22.22■■□□□ 1.15
CLK1-211ENST00000481641 PARP14Q460N5 1801 aa22.22■■□□□ 1.15
CLK1-211ENST00000481641 RANBP2P49792 3224 aaKnown RBP22.21■■□□□ 1.15
CLK1-211ENST00000481641 ERC2O15083 957 aa22.21■■□□□ 1.15
CLK1-211ENST00000481641 HOXC6P09630 235 aa22.21■■□□□ 1.15
CLK1-211ENST00000481641 ADORA2AP29274 412 aa22.21■■□□□ 1.15
CLK1-211ENST00000481641 CYP2C19P33261 490 aa22.21■■□□□ 1.15
CLK1-211ENST00000481641 TDO2P48775 406 aa22.21■■□□□ 1.15
CLK1-211ENST00000481641 C7orf61Q8IZ16 206 aa22.21■■□□□ 1.15
CLK1-211ENST00000481641 GREB1LQ9C091 1923 aaPredicted RBP22.2■■□□□ 1.14
CLK1-211ENST00000481641 PRDM1O75626 825 aa22.2■■□□□ 1.14
CLK1-211ENST00000481641 MX1P20591 662 aa22.2■■□□□ 1.14
CLK1-211ENST00000481641 TMEM132BQ14DG7 1078 aa22.2■■□□□ 1.14
CLK1-211ENST00000481641 FAM83BQ5T0W9 1011 aa22.2■■□□□ 1.14
CLK1-211ENST00000481641 DPP9Q86TI2 863 aa22.2■■□□□ 1.14
CLK1-211ENST00000481641 NCAPG2Q86XI2 1143 aa22.2■■□□□ 1.14
CLK1-211ENST00000481641 MB21D1Q8N884 522 aa22.2■■□□□ 1.14
CLK1-211ENST00000481641 FSD1Q9BTV5 496 aa22.2■■□□□ 1.14
CLK1-211ENST00000481641 COL11A1P12107 1806 aaPredicted RBP22.2■■□□□ 1.14
CLK1-211ENST00000481641 PATL2C9JE40 543 aaKnown RBP22.19■■□□□ 1.14
CLK1-211ENST00000481641 COBLO75128 1261 aa22.19■■□□□ 1.14
CLK1-211ENST00000481641 GNAT2P19087 354 aa22.19■■□□□ 1.14
CLK1-211ENST00000481641 CNGA1P29973 690 aa22.19■■□□□ 1.14
CLK1-211ENST00000481641 ANKRD45Q5TZF3 282 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms