RNA–Protein interactions for RNA: ENST00000481453.5

MRPL28-209, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 2

Gene MRPL28, Length 2,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-209ENST00000481453 KAT14Q9H8E8 782 aa21.14■□□□□ 0.98
MRPL28-209ENST00000481453 TSPY3P0CV98 308 aa21.14■□□□□ 0.97
MRPL28-209ENST00000481453 TSPY8P0CW00 308 aa21.14■□□□□ 0.97
MRPL28-209ENST00000481453 CCDC144BQ3MJ40 725 aa21.14■□□□□ 0.97
MRPL28-209ENST00000481453 PNMA1Q8ND90 353 aa21.14■□□□□ 0.97
MRPL28-209ENST00000481453 DBNDD1Q9H9R9 158 aa21.14■□□□□ 0.97
MRPL28-209ENST00000481453 KCNQ5Q9NR82 932 aa21.14■□□□□ 0.97
MRPL28-209ENST00000481453 SCN9AQ15858 1988 aa21.14■□□□□ 0.97
MRPL28-209ENST00000481453 A0A087WWV3 80 aa21.13■□□□□ 0.97
MRPL28-209ENST00000481453 RIOK3O14730 519 aaKnown RBP21.13■□□□□ 0.97
MRPL28-209ENST00000481453 CMA1P23946 247 aa21.13■□□□□ 0.97
MRPL28-209ENST00000481453 ZNF710Q8N1W2 664 aa21.13■□□□□ 0.97
MRPL28-209ENST00000481453 CACTINQ8WUQ7 758 aaKnown RBP21.13■□□□□ 0.97
MRPL28-209ENST00000481453 C7orf43Q8WVR3 580 aa21.13■□□□□ 0.97
MRPL28-209ENST00000481453 MRFAP1L1Q96HT8 127 aa21.13■□□□□ 0.97
MRPL28-209ENST00000481453 ARID3AQ99856 593 aa21.13■□□□□ 0.97
MRPL28-209ENST00000481453 SDF4Q9BRK5 362 aa21.13■□□□□ 0.97
MRPL28-209ENST00000481453 PDGFDQ9GZP0 370 aaPredicted RBP21.13■□□□□ 0.97
MRPL28-209ENST00000481453 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.13■□□□□ 0.97
MRPL28-209ENST00000481453 NPY5RQ15761 445 aa21.13■□□□□ 0.97
MRPL28-209ENST00000481453 CCDC178Q5BJE1 867 aa21.13■□□□□ 0.97
MRPL28-209ENST00000481453 DHX40Q8IX18 779 aaKnown RBP21.13■□□□□ 0.97
MRPL28-209ENST00000481453 CEP57L1Q8IYX8 460 aa21.13■□□□□ 0.97
MRPL28-209ENST00000481453 DDX4Q9NQI0 724 aaKnown RBP21.13■□□□□ 0.97
MRPL28-209ENST00000481453 PODNQ7Z5L7 613 aa21.12■□□□□ 0.97
MRPL28-209ENST00000481453 ERCC4Q92889 916 aaPredicted RBP21.12■□□□□ 0.97
MRPL28-209ENST00000481453 PFKFB1P16118 471 aa21.12■□□□□ 0.97
MRPL28-209ENST00000481453 SCNN1DP51172 638 aa21.12■□□□□ 0.97
MRPL28-209ENST00000481453 GRM4Q14833 912 aa21.12■□□□□ 0.97
MRPL28-209ENST00000481453 NAT10Q9H0A0 1025 aaKnown RBP21.12■□□□□ 0.97
MRPL28-209ENST00000481453 ZNF287Q9HBT7 754 aa21.12■□□□□ 0.97
MRPL28-209ENST00000481453 VEGFAP15692 232 aaPredicted RBP21.11■□□□□ 0.97
MRPL28-209ENST00000481453 XBP1P17861 261 aa21.11■□□□□ 0.97
MRPL28-209ENST00000481453 KIF5BP33176 963 aa21.11■□□□□ 0.97
MRPL28-209ENST00000481453 SHC4Q6S5L8 630 aa21.11■□□□□ 0.97
MRPL28-209ENST00000481453 STAG2Q8N3U4 1231 aa21.11■□□□□ 0.97
MRPL28-209ENST00000481453 NEDD1Q8NHV4 660 aa21.11■□□□□ 0.97
MRPL28-209ENST00000481453 CNKSR1Q969H4 720 aa21.11■□□□□ 0.97
MRPL28-209ENST00000481453 C16orf45Q96MC5 204 aaPredicted RBP21.11■□□□□ 0.97
MRPL28-209ENST00000481453 TMEM47Q9BQJ4 181 aa21.11■□□□□ 0.97
MRPL28-209ENST00000481453 ZNF219Q9P2Y4 722 aaPredicted RBP21.11■□□□□ 0.97
MRPL28-209ENST00000481453 FAM205CA6NFA0 338 aa21.1■□□□□ 0.97
MRPL28-209ENST00000481453 SLC35G1Q2M3R5 365 aa21.1■□□□□ 0.97
MRPL28-209ENST00000481453 RILPL1Q5EBL4 403 aa21.1■□□□□ 0.97
MRPL28-209ENST00000481453 EARS2Q5JPH6 523 aaKnown RBP21.1■□□□□ 0.97
MRPL28-209ENST00000481453 HHIPL2Q6UWX4 724 aa21.1■□□□□ 0.97
MRPL28-209ENST00000481453 JMYQ8N9B5 988 aa21.1■□□□□ 0.97
MRPL28-209ENST00000481453 TNFRSF25Q93038 417 aa21.1■□□□□ 0.97
MRPL28-209ENST00000481453 MAD2L2Q9UI95 211 aa21.1■□□□□ 0.97
MRPL28-209ENST00000481453 HPSEQ9Y251 543 aa21.1■□□□□ 0.97
MRPL28-209ENST00000481453 FAM237AA0A1B0GTK4 181 aa21.1■□□□□ 0.97
MRPL28-209ENST00000481453 G3V3G9 751 aa21.1■□□□□ 0.97
MRPL28-209ENST00000481453 GABPAQ06546 454 aa21.1■□□□□ 0.97
MRPL28-209ENST00000481453 PICALMQ13492 652 aa21.1■□□□□ 0.97
MRPL28-209ENST00000481453 DCAF8Q5TAQ9 597 aa21.1■□□□□ 0.97
MRPL28-209ENST00000481453 APOBEC3HQ6NTF7 200 aaKnown RBP21.1■□□□□ 0.97
MRPL28-209ENST00000481453 CLIC6Q96NY7 704 aa21.1■□□□□ 0.97
MRPL28-209ENST00000481453 BAZ2BQ9UIF8 2168 aaKnown RBP21.1■□□□□ 0.97
MRPL28-209ENST00000481453 SCG2P13521 617 aa21.09■□□□□ 0.97
MRPL28-209ENST00000481453 KRT2P35908 639 aa21.09■□□□□ 0.97
MRPL28-209ENST00000481453 ZRSR1Q15695 479 aaKnown RBP21.09■□□□□ 0.97
MRPL28-209ENST00000481453 PFKFB3Q16875 520 aaPredicted RBP21.09■□□□□ 0.97
MRPL28-209ENST00000481453 LRRC8AQ8IWT6 810 aa21.09■□□□□ 0.97
MRPL28-209ENST00000481453 AOPEPQ8N6M6 819 aa21.09■□□□□ 0.97
MRPL28-209ENST00000481453 PCDHB6Q9Y5E3 794 aa21.09■□□□□ 0.97
MRPL28-209ENST00000481453 NOVP48745 357 aa21.09■□□□□ 0.97
MRPL28-209ENST00000481453 RESP18Q5W5W9 173 aa21.09■□□□□ 0.97
MRPL28-209ENST00000481453 CDC42EP5Q6NZY7 148 aa21.09■□□□□ 0.97
MRPL28-209ENST00000481453 TEKT1Q969V4 418 aa21.09■□□□□ 0.97
MRPL28-209ENST00000481453 CABP5Q9NP86 173 aa21.09■□□□□ 0.97
MRPL28-209ENST00000481453 USP40Q9NVE5 1235 aa21.09■□□□□ 0.97
MRPL28-209ENST00000481453 C10orf71Q711Q0 1435 aa21.08■□□□□ 0.97
MRPL28-209ENST00000481453 ECE2O60344 883 aa21.08■□□□□ 0.97
MRPL28-209ENST00000481453 NEMFO60524 1076 aa21.08■□□□□ 0.97
MRPL28-209ENST00000481453 CUTAO60888 179 aa21.08■□□□□ 0.97
MRPL28-209ENST00000481453 ZNF202O95125 648 aa21.08■□□□□ 0.97
MRPL28-209ENST00000481453 DACT2Q5SW24 774 aa21.08■□□□□ 0.97
MRPL28-209ENST00000481453 STX8Q9UNK0 236 aa21.08■□□□□ 0.97
MRPL28-209ENST00000481453 PLIN4Q96Q06 1357 aa21.08■□□□□ 0.96
MRPL28-209ENST00000481453 TNNT1P13805 278 aa21.08■□□□□ 0.96
MRPL28-209ENST00000481453 TPD52L1Q16890 204 aaPredicted RBP21.08■□□□□ 0.96
MRPL28-209ENST00000481453 KIAA1468Q9P260 1216 aa21.08■□□□□ 0.96
MRPL28-209ENST00000481453 FBXO2Q9UK22 296 aaPredicted RBP21.08■□□□□ 0.96
MRPL28-209ENST00000481453 CRKP46108 304 aa21.07■□□□□ 0.96
MRPL28-209ENST00000481453 FKBP1AP62942 108 aaKnown RBP21.07■□□□□ 0.96
MRPL28-209ENST00000481453 NOM1Q5C9Z4 860 aaKnown RBP21.07■□□□□ 0.96
MRPL28-209ENST00000481453 STRIP1Q5VSL9 837 aa21.07■□□□□ 0.96
MRPL28-209ENST00000481453 RASGRP2Q7LDG7 609 aa21.07■□□□□ 0.96
MRPL28-209ENST00000481453 PALM3A6NDB9 673 aaPredicted RBP21.06■□□□□ 0.96
MRPL28-209ENST00000481453 DEFB132Q7Z7B7 95 aa21.06■□□□□ 0.96
MRPL28-209ENST00000481453 KRI1Q8N9T8 703 aaKnown RBP21.06■□□□□ 0.96
MRPL28-209ENST00000481453 CEP95Q96GE4 821 aa21.06■□□□□ 0.96
MRPL28-209ENST00000481453 CCDC94Q9BW85 323 aaPredicted RBP21.06■□□□□ 0.96
MRPL28-209ENST00000481453 ADAMTS3O15072 1205 aa21.06■□□□□ 0.96
MRPL28-209ENST00000481453 GRIN1Q05586 938 aa21.06■□□□□ 0.96
MRPL28-209ENST00000481453 ARID5BQ14865 1188 aa21.06■□□□□ 0.96
MRPL28-209ENST00000481453 FILIP1Q7Z7B0 1213 aa21.06■□□□□ 0.96
MRPL28-209ENST00000481453 ZDHHC15Q96MV8 337 aa21.06■□□□□ 0.96
MRPL28-209ENST00000481453 OSBPL5Q9H0X9 879 aaPredicted RBP21.06■□□□□ 0.96
MRPL28-209ENST00000481453 PCDHAC2Q9Y5I4 1007 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms