RNA–Protein interactions for RNA: ENST00000481152.2

CHCHD3-205, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 2

Gene CHCHD3, Length 1,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-205ENST00000481152 HTR3BO95264 441 aa6.91□□□□□ -1.3
CHCHD3-205ENST00000481152 FBXL19Q6PCT2 694 aa6.91□□□□□ -1.3
CHCHD3-205ENST00000481152 HS2ST1Q7LGA3 356 aa6.91□□□□□ -1.3
CHCHD3-205ENST00000481152 SLFN12Q8IYM2 578 aa6.91□□□□□ -1.3
CHCHD3-205ENST00000481152 ANKRD13AQ8IZ07 590 aa6.91□□□□□ -1.3
CHCHD3-205ENST00000481152 SREK1Q8WXA9 508 aaKnown RBP6.91□□□□□ -1.3
CHCHD3-205ENST00000481152 CARS2Q9HA77 564 aaKnown RBP6.91□□□□□ -1.3
CHCHD3-205ENST00000481152 GGT7Q9UJ14 662 aa6.91□□□□□ -1.3
CHCHD3-205ENST00000481152 TLR3O15455 904 aaKnown RBP6.9□□□□□ -1.31
CHCHD3-205ENST00000481152 NCLP19338 710 aaKnown RBP6.9□□□□□ -1.31
CHCHD3-205ENST00000481152 EIF4A3P38919 411 aaKnown RBP6.9□□□□□ -1.31
CHCHD3-205ENST00000481152 PIWIL2Q8TC59 973 aaKnown RBP6.9□□□□□ -1.31
CHCHD3-205ENST00000481152 Q96M66 194 aa6.9□□□□□ -1.31
CHCHD3-205ENST00000481152 LRRC3Q9BY71 257 aa6.9□□□□□ -1.31
CHCHD3-205ENST00000481152 GOLGA2P5Q9HBQ8 144 aa6.9□□□□□ -1.31
CHCHD3-205ENST00000481152 KLHL3Q9UH77 587 aa6.9□□□□□ -1.31
CHCHD3-205ENST00000481152 SUPT16HQ9Y5B9 1047 aaKnown RBP6.9□□□□□ -1.31
CHCHD3-205ENST00000481152 CADPSQ9ULU8 1353 aa6.9□□□□□ -1.31
CHCHD3-205ENST00000481152 NCAPD3P42695 1498 aa6.89□□□□□ -1.31
CHCHD3-205ENST00000481152 CHURC1-FNTBB4DL54 471 aa6.89□□□□□ -1.31
CHCHD3-205ENST00000481152 GREM1O60565 184 aa6.89□□□□□ -1.31
CHCHD3-205ENST00000481152 CWF19L2Q2TBE0 894 aaKnown RBP6.89□□□□□ -1.31
CHCHD3-205ENST00000481152 FLAD1Q8NFF5 587 aa6.89□□□□□ -1.31
CHCHD3-205ENST00000481152 UBE2FQ969M7 185 aa6.89□□□□□ -1.31
CHCHD3-205ENST00000481152 ZSWIM5Q9P217 1185 aa6.89□□□□□ -1.31
CHCHD3-205ENST00000481152 ROBO2Q9HCK4 1378 aa6.89□□□□□ -1.31
CHCHD3-205ENST00000481152 CARMIL2Q6F5E8 1435 aa6.89□□□□□ -1.31
CHCHD3-205ENST00000481152 KIF27Q86VH2 1401 aa6.89□□□□□ -1.31
CHCHD3-205ENST00000481152 DNAJA2O60884 412 aa6.88□□□□□ -1.31
CHCHD3-205ENST00000481152 TCF3P15923 654 aa6.88□□□□□ -1.31
CHCHD3-205ENST00000481152 LDLRAD1Q5T700 205 aa6.88□□□□□ -1.31
CHCHD3-205ENST00000481152 KRTAP19-1Q8IUB9 90 aa6.88□□□□□ -1.31
CHCHD3-205ENST00000481152 ZNF296Q8WUU4 475 aaPredicted RBP6.88□□□□□ -1.31
CHCHD3-205ENST00000481152 C8orf37Q96NL8 207 aa6.88□□□□□ -1.31
CHCHD3-205ENST00000481152 ADAMTS1Q9UHI8 967 aa6.88□□□□□ -1.31
CHCHD3-205ENST00000481152 CTNND2Q9UQB3 1225 aa6.88□□□□□ -1.31
CHCHD3-205ENST00000481152 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.88□□□□□ -1.31
CHCHD3-205ENST00000481152 CRKP46108 304 aa6.87□□□□□ -1.31
CHCHD3-205ENST00000481152 TNNI2P48788 182 aa6.87□□□□□ -1.31
CHCHD3-205ENST00000481152 OGFOD2Q6N063 350 aa6.87□□□□□ -1.31
CHCHD3-205ENST00000481152 FAM168AQ92567 244 aa6.87□□□□□ -1.31
CHCHD3-205ENST00000481152 BRMS1Q9HCU9 246 aa6.87□□□□□ -1.31
CHCHD3-205ENST00000481152 CCNB3Q8WWL7 1395 aa6.87□□□□□ -1.31
CHCHD3-205ENST00000481152 TAF7LQ5H9L4 462 aa6.86□□□□□ -1.31
CHCHD3-205ENST00000481152 TMPRSS7Q7RTY8 843 aa6.86□□□□□ -1.31
CHCHD3-205ENST00000481152 DTWD2Q8NBA8 298 aa6.86□□□□□ -1.31
CHCHD3-205ENST00000481152 TMEM87AQ8NBN3 555 aa6.86□□□□□ -1.31
CHCHD3-205ENST00000481152 BAHD1Q8TBE0 780 aaPredicted RBP6.86□□□□□ -1.31
CHCHD3-205ENST00000481152 RNF141Q8WVD5 230 aa6.86□□□□□ -1.31
CHCHD3-205ENST00000481152 CCDC74BQ96LY2 380 aa6.86□□□□□ -1.31
CHCHD3-205ENST00000481152 PSMD1Q99460 953 aa6.86□□□□□ -1.31
CHCHD3-205ENST00000481152 DUSP15Q9H1R2 295 aaPredicted RBP6.86□□□□□ -1.31
CHCHD3-205ENST00000481152 PCDHB14Q9Y5E9 798 aa6.86□□□□□ -1.31
CHCHD3-205ENST00000481152 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.86□□□□□ -1.31
CHCHD3-205ENST00000481152 TIAM1Q13009 1591 aa6.86□□□□□ -1.31
CHCHD3-205ENST00000481152 CFAP43Q8NDM7 1665 aa6.86□□□□□ -1.31
CHCHD3-205ENST00000481152 CUX1P39880 1505 aa6.85□□□□□ -1.31
CHCHD3-205ENST00000481152 CFTRP13569 1480 aa6.85□□□□□ -1.31
CHCHD3-205ENST00000481152 ARHGAP35Q9NRY4 1499 aa6.85□□□□□ -1.31
CHCHD3-205ENST00000481152 MLECQ14165 292 aa6.85□□□□□ -1.31
CHCHD3-205ENST00000481152 PHACTR4Q8IZ21 702 aa6.85□□□□□ -1.31
CHCHD3-205ENST00000481152 KREMEN1Q96MU8 473 aa6.85□□□□□ -1.31
CHCHD3-205ENST00000481152 TRIT1Q9H3H1 467 aaKnown RBP6.85□□□□□ -1.31
CHCHD3-205ENST00000481152 KCNH3Q9ULD8 1083 aa6.85□□□□□ -1.31
CHCHD3-205ENST00000481152 WASH4PA8MWX3 477 aa6.84□□□□□ -1.31
CHCHD3-205ENST00000481152 ATE1O95260 518 aa6.84□□□□□ -1.31
CHCHD3-205ENST00000481152 ESR1P03372 595 aa6.84□□□□□ -1.31
CHCHD3-205ENST00000481152 GAB4Q2WGN9 574 aa6.84□□□□□ -1.31
CHCHD3-205ENST00000481152 POU5F2Q8N7G0 328 aa6.84□□□□□ -1.31
CHCHD3-205ENST00000481152 ALPK1Q96QP1 1244 aa6.84□□□□□ -1.31
CHCHD3-205ENST00000481152 KIF2CQ99661 725 aa6.84□□□□□ -1.31
CHCHD3-205ENST00000481152 ASPNQ9BXN1 380 aa6.84□□□□□ -1.31
CHCHD3-205ENST00000481152 GPR62Q9BZJ7 368 aa6.84□□□□□ -1.31
CHCHD3-205ENST00000481152 C19orf73Q9NVV2 129 aa6.84□□□□□ -1.31
CHCHD3-205ENST00000481152 UBP1Q9NZI7 540 aa6.84□□□□□ -1.31
CHCHD3-205ENST00000481152 MAPKBP1O60336 1514 aa6.84□□□□□ -1.31
CHCHD3-205ENST00000481152 ANKRD62A6NC57 917 aa6.83□□□□□ -1.32
CHCHD3-205ENST00000481152 SLC22A31A6NKX4 558 aa6.83□□□□□ -1.32
CHCHD3-205ENST00000481152 LRRN2O75325 713 aa6.83□□□□□ -1.32
CHCHD3-205ENST00000481152 SRFP11831 508 aa6.83□□□□□ -1.32
CHCHD3-205ENST00000481152 TPP2P29144 1249 aaPredicted RBP6.83□□□□□ -1.32
CHCHD3-205ENST00000481152 ZNF76P36508 570 aa6.83□□□□□ -1.32
CHCHD3-205ENST00000481152 APOBRQ0VD83 1088 aa6.83□□□□□ -1.32
CHCHD3-205ENST00000481152 SEZ6Q53EL9 994 aa6.83□□□□□ -1.32
CHCHD3-205ENST00000481152 ARSHQ5FYA8 562 aa6.83□□□□□ -1.32
CHCHD3-205ENST00000481152 ZSWIM9Q86XI8 627 aa6.83□□□□□ -1.32
CHCHD3-205ENST00000481152 CREG2Q8IUH2 290 aa6.83□□□□□ -1.32
CHCHD3-205ENST00000481152 UBXN4Q92575 508 aa6.83□□□□□ -1.32
CHCHD3-205ENST00000481152 YTHDC1Q96MU7 727 aaKnown RBP6.83□□□□□ -1.32
CHCHD3-205ENST00000481152 BACH2Q9BYV9 841 aa6.83□□□□□ -1.32
CHCHD3-205ENST00000481152 GPATCH2Q9NW75 528 aa6.83□□□□□ -1.32
CHCHD3-205ENST00000481152 SLAMF8Q9P0V8 285 aa6.83□□□□□ -1.32
CHCHD3-205ENST00000481152 GMIPQ9P107 970 aa6.83□□□□□ -1.32
CHCHD3-205ENST00000481152 RGS13O14921 159 aa6.82□□□□□ -1.32
CHCHD3-205ENST00000481152 RAG1P15918 1043 aa6.82□□□□□ -1.32
CHCHD3-205ENST00000481152 GBP1P32455 592 aa6.82□□□□□ -1.32
CHCHD3-205ENST00000481152 GDNFP39905 211 aa6.82□□□□□ -1.32
CHCHD3-205ENST00000481152 AFMP43652 599 aa6.82□□□□□ -1.32
CHCHD3-205ENST00000481152 KCNMB1Q16558 191 aa6.82□□□□□ -1.32
CHCHD3-205ENST00000481152 LCE3BQ5TA77 95 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms