RNA–Protein interactions for RNA: ENST00000481077.6

CNKSR1-206, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 3

Gene CNKSR1, Length 865 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-206ENST00000481077 B4E1Z4 1266 aa18.4■□□□□ 0.54
CNKSR1-206ENST00000481077 USP17L15C9J2P7 530 aa18.4■□□□□ 0.54
CNKSR1-206ENST00000481077 USP17L13C9JLJ4 530 aa18.4■□□□□ 0.54
CNKSR1-206ENST00000481077 USP17L11C9JVI0 530 aa18.4■□□□□ 0.54
CNKSR1-206ENST00000481077 USP17L18D6R9N7 530 aa18.4■□□□□ 0.54
CNKSR1-206ENST00000481077 USP17L22D6RA61 530 aa18.4■□□□□ 0.54
CNKSR1-206ENST00000481077 USP17L17D6RBQ6 530 aa18.4■□□□□ 0.54
CNKSR1-206ENST00000481077 USP17L19D6RCP7 530 aa18.4■□□□□ 0.54
CNKSR1-206ENST00000481077 USP17L20D6RJB6 530 aa18.4■□□□□ 0.54
CNKSR1-206ENST00000481077 NMT2O60551 498 aa18.4■□□□□ 0.54
CNKSR1-206ENST00000481077 KDM4AO75164 1064 aa18.4■□□□□ 0.54
CNKSR1-206ENST00000481077 REC8O95072 547 aa18.4■□□□□ 0.54
CNKSR1-206ENST00000481077 USP17L24Q0WX57 530 aa18.4■□□□□ 0.54
CNKSR1-206ENST00000481077 SPICE1Q8N0Z3 855 aa18.4■□□□□ 0.54
CNKSR1-206ENST00000481077 MKL1Q969V6 931 aa18.4■□□□□ 0.54
CNKSR1-206ENST00000481077 ASCC2Q9H1I8 757 aaPredicted RBP18.4■□□□□ 0.54
CNKSR1-206ENST00000481077 RPAP3Q9H6T3 665 aaPredicted RBP18.4■□□□□ 0.54
CNKSR1-206ENST00000481077 PRDM10Q9NQV6 1147 aa18.4■□□□□ 0.54
CNKSR1-206ENST00000481077 TCP11L1Q9NUJ3 509 aa18.4■□□□□ 0.54
CNKSR1-206ENST00000481077 SYNPO2Q9UMS6 1093 aa18.4■□□□□ 0.54
CNKSR1-206ENST00000481077 GTF3C3Q9Y5Q9 886 aa18.4■□□□□ 0.54
CNKSR1-206ENST00000481077 NECTIN1Q15223 517 aa18.39■□□□□ 0.53
CNKSR1-206ENST00000481077 RNF20Q5VTR2 975 aa18.39■□□□□ 0.53
CNKSR1-206ENST00000481077 IQCA1Q86XH1 822 aa18.39■□□□□ 0.53
CNKSR1-206ENST00000481077 E7EWF7 191 aa18.38■□□□□ 0.53
CNKSR1-206ENST00000481077 SLC27A2O14975 620 aa18.38■□□□□ 0.53
CNKSR1-206ENST00000481077 WDR46O15213 610 aaKnown RBP18.38■□□□□ 0.53
CNKSR1-206ENST00000481077 FKTNO75072 461 aa18.38■□□□□ 0.53
CNKSR1-206ENST00000481077 CCDC178Q5BJE1 867 aa18.38■□□□□ 0.53
CNKSR1-206ENST00000481077 KIAA1755Q5JYT7 1200 aa18.38■□□□□ 0.53
CNKSR1-206ENST00000481077 CREB3L3Q68CJ9 461 aa18.38■□□□□ 0.53
CNKSR1-206ENST00000481077 RALYLQ86SE5 291 aaKnown RBP18.38■□□□□ 0.53
CNKSR1-206ENST00000481077 LRRC47Q8N1G4 583 aaKnown RBP18.38■□□□□ 0.53
CNKSR1-206ENST00000481077 ZNF296Q8WUU4 475 aaPredicted RBP18.38■□□□□ 0.53
CNKSR1-206ENST00000481077 TANGO6Q9C0B7 1094 aa18.38■□□□□ 0.53
CNKSR1-206ENST00000481077 ZSWIM5Q9P217 1185 aa18.38■□□□□ 0.53
CNKSR1-206ENST00000481077 CPA4Q9UI42 421 aa18.38■□□□□ 0.53
CNKSR1-206ENST00000481077 MYH4Q9Y623 1939 aa18.37■□□□□ 0.53
CNKSR1-206ENST00000481077 F5H6K3 240 aa18.37■□□□□ 0.53
CNKSR1-206ENST00000481077 GCLCP48506 637 aaPredicted RBP18.37■□□□□ 0.53
CNKSR1-206ENST00000481077 NOVP48745 357 aa18.37■□□□□ 0.53
CNKSR1-206ENST00000481077 SP3Q02447 781 aa18.37■□□□□ 0.53
CNKSR1-206ENST00000481077 KLRC3Q07444 240 aa18.37■□□□□ 0.53
CNKSR1-206ENST00000481077 C17orf99Q6UX52 265 aa18.37■□□□□ 0.53
CNKSR1-206ENST00000481077 CATSPERGQ6ZRH7 1159 aa18.37■□□□□ 0.53
CNKSR1-206ENST00000481077 NCOA7Q8NI08 942 aa18.37■□□□□ 0.53
CNKSR1-206ENST00000481077 NKX2-3Q8TAU0 364 aa18.37■□□□□ 0.53
CNKSR1-206ENST00000481077 TTC14Q96N46 770 aa18.37■□□□□ 0.53
CNKSR1-206ENST00000481077 ZKSCAN3Q9BRR0 538 aa18.37■□□□□ 0.53
CNKSR1-206ENST00000481077 TAF6LQ9Y6J9 622 aa18.37■□□□□ 0.53
CNKSR1-206ENST00000481077 ADGRA2Q96PE1 1338 aa18.37■□□□□ 0.53
CNKSR1-206ENST00000481077 NDUFB10O96000 172 aa18.36■□□□□ 0.53
CNKSR1-206ENST00000481077 HERVK_113P62684 666 aa18.36■□□□□ 0.53
CNKSR1-206ENST00000481077 GMCL1P1Q8NEA9 526 aa18.36■□□□□ 0.53
CNKSR1-206ENST00000481077 P2RX7Q99572 595 aaKnown RBP18.36■□□□□ 0.53
CNKSR1-206ENST00000481077 UBAC1Q9BSL1 405 aa18.36■□□□□ 0.53
CNKSR1-206ENST00000481077 TOP1P11387 765 aaKnown RBP18.35■□□□□ 0.53
CNKSR1-206ENST00000481077 STOX1Q6ZVD7 989 aa18.35■□□□□ 0.53
CNKSR1-206ENST00000481077 GTF3C2Q8WUA4 911 aaPredicted RBP18.35■□□□□ 0.53
CNKSR1-206ENST00000481077 ZSCAN10Q96SZ4 725 aaPredicted RBP18.35■□□□□ 0.53
CNKSR1-206ENST00000481077 FLOT1O75955 427 aa18.34■□□□□ 0.53
CNKSR1-206ENST00000481077 BCRP11274 1271 aa18.34■□□□□ 0.53
CNKSR1-206ENST00000481077 ZKSCAN1P17029 563 aaPredicted RBP18.34■□□□□ 0.53
CNKSR1-206ENST00000481077 COG2Q14746 738 aa18.34■□□□□ 0.53
CNKSR1-206ENST00000481077 KIF22Q14807 665 aa18.34■□□□□ 0.53
CNKSR1-206ENST00000481077 FAM83BQ5T0W9 1011 aa18.34■□□□□ 0.53
CNKSR1-206ENST00000481077 SLFN13Q68D06 897 aa18.34■□□□□ 0.53
CNKSR1-206ENST00000481077 DGKHQ86XP1 1220 aa18.34■□□□□ 0.53
CNKSR1-206ENST00000481077 ANKRD13CQ8N6S4 541 aa18.34■□□□□ 0.53
CNKSR1-206ENST00000481077 ERO1AQ96HE7 468 aa18.34■□□□□ 0.53
CNKSR1-206ENST00000481077 TMEM47Q9BQJ4 181 aa18.34■□□□□ 0.53
CNKSR1-206ENST00000481077 HOXC10Q9NYD6 342 aa18.34■□□□□ 0.53
CNKSR1-206ENST00000481077 TNKSO95271 1327 aa18.33■□□□□ 0.53
CNKSR1-206ENST00000481077 EPB41L2O43491 1005 aaKnown RBP18.33■□□□□ 0.52
CNKSR1-206ENST00000481077 EIF5BO60841 1220 aaKnown RBP18.33■□□□□ 0.52
CNKSR1-206ENST00000481077 RCSD1Q6JBY9 416 aa18.33■□□□□ 0.52
CNKSR1-206ENST00000481077 CYB5R4Q7L1T6 521 aa18.33■□□□□ 0.52
CNKSR1-206ENST00000481077 ENAHQ8N8S7 591 aaPredicted RBP18.33■□□□□ 0.52
CNKSR1-206ENST00000481077 GMCL1Q96IK5 515 aa18.33■□□□□ 0.52
CNKSR1-206ENST00000481077 NUP88Q99567 741 aaPredicted RBP18.33■□□□□ 0.52
CNKSR1-206ENST00000481077 ISY1Q9ULR0 285 aaKnown RBP18.33■□□□□ 0.52
CNKSR1-206ENST00000481077 MYPNQ86TC9 1320 aa18.32■□□□□ 0.52
CNKSR1-206ENST00000481077 CASP8AP2Q9UKL3 1982 aa18.32■□□□□ 0.52
CNKSR1-206ENST00000481077 ERICH2A1L162 156 aa18.32■□□□□ 0.52
CNKSR1-206ENST00000481077 SLC1A4P43007 532 aa18.32■□□□□ 0.52
CNKSR1-206ENST00000481077 LACTBP83111 547 aaPredicted RBP18.32■□□□□ 0.52
CNKSR1-206ENST00000481077 SART3Q15020 963 aaKnown RBP18.32■□□□□ 0.52
CNKSR1-206ENST00000481077 ARHGEF6Q15052 776 aa18.32■□□□□ 0.52
CNKSR1-206ENST00000481077 FAM110CQ1W6H9 321 aa18.32■□□□□ 0.52
CNKSR1-206ENST00000481077 SAMD1Q6SPF0 538 aaPredicted RBP18.32■□□□□ 0.52
CNKSR1-206ENST00000481077 LBX2Q6XYB7 198 aa18.32■□□□□ 0.52
CNKSR1-206ENST00000481077 CD99L2Q8TCZ2 262 aa18.32■□□□□ 0.52
CNKSR1-206ENST00000481077 ANKS1AQ92625 1134 aa18.32■□□□□ 0.52
CNKSR1-206ENST00000481077 MTMR7Q9Y216 660 aa18.32■□□□□ 0.52
CNKSR1-206ENST00000481077 SPDYE16A6NNV3 312 aaPredicted RBP18.31■□□□□ 0.52
CNKSR1-206ENST00000481077 IFIT3O14879 490 aaKnown RBP18.31■□□□□ 0.52
CNKSR1-206ENST00000481077 BMP3P12645 472 aa18.31■□□□□ 0.52
CNKSR1-206ENST00000481077 MCCP23508 829 aa18.31■□□□□ 0.52
CNKSR1-206ENST00000481077 HSPA4P34932 840 aa18.31■□□□□ 0.52
CNKSR1-206ENST00000481077 KRT32Q14532 448 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms