RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 DBN1Q16643 649 aa10.51□□□□□ -0.73
VEGFA-212ENST00000480614 JARID2Q92833 1246 aaPredicted RBP10.51□□□□□ -0.73
VEGFA-212ENST00000480614 A0A1B0GVL5 298 aa10.51□□□□□ -0.73
VEGFA-212ENST00000480614 EXOC3O60645 756 aa10.51□□□□□ -0.73
VEGFA-212ENST00000480614 RBBP5Q15291 538 aaKnown RBP10.51□□□□□ -0.73
VEGFA-212ENST00000480614 FBXO31Q5XUX0 539 aaPredicted RBP10.51□□□□□ -0.73
VEGFA-212ENST00000480614 KRBA2Q6ZNG9 492 aa10.51□□□□□ -0.73
VEGFA-212ENST00000480614 UBAP1LF5GYI3 381 aa10.51□□□□□ -0.73
VEGFA-212ENST00000480614 C8orf37Q96NL8 207 aa10.51□□□□□ -0.73
VEGFA-212ENST00000480614 MED4Q9NPJ6 270 aa10.51□□□□□ -0.73
VEGFA-212ENST00000480614 KRT71Q3SY84 523 aa10.51□□□□□ -0.73
VEGFA-212ENST00000480614 PPP1R2P3Q6NXS1 205 aa10.51□□□□□ -0.73
VEGFA-212ENST00000480614 MYCT1Q8N699 235 aa10.51□□□□□ -0.73
VEGFA-212ENST00000480614 OATP04181 439 aa10.51□□□□□ -0.73
VEGFA-212ENST00000480614 GTF3C6Q969F1 213 aa10.51□□□□□ -0.73
VEGFA-212ENST00000480614 HOMER3Q9NSC5 361 aa10.51□□□□□ -0.73
VEGFA-212ENST00000480614 GAS7O60861 476 aa10.51□□□□□ -0.73
VEGFA-212ENST00000480614 COG7P83436 770 aa10.51□□□□□ -0.73
VEGFA-212ENST00000480614 TRIM58Q8NG06 486 aa10.51□□□□□ -0.73
VEGFA-212ENST00000480614 DDX21Q9NR30 783 aaKnown RBP eCLIP10.51□□□□□ -0.73
VEGFA-212ENST00000480614 THAP12O43422 761 aa10.51□□□□□ -0.73
VEGFA-212ENST00000480614 GRM1Q13255 1194 aa10.51□□□□□ -0.73
VEGFA-212ENST00000480614 STK32BQ9NY57 414 aa10.51□□□□□ -0.73
VEGFA-212ENST00000480614 SOS2Q07890 1332 aaPredicted RBP10.51□□□□□ -0.73
VEGFA-212ENST00000480614 CEP104O60308 925 aa10.51□□□□□ -0.73
VEGFA-212ENST00000480614 POLR2BP30876 1174 aaKnown RBP10.51□□□□□ -0.73
VEGFA-212ENST00000480614 NLRX1Q86UT6 975 aa10.51□□□□□ -0.73
VEGFA-212ENST00000480614 ZBTB8OSQ8IWT0 167 aa10.51□□□□□ -0.73
VEGFA-212ENST00000480614 PLBD2Q8NHP8 589 aa10.51□□□□□ -0.73
VEGFA-212ENST00000480614 FAM71BQ8TC56 605 aa10.51□□□□□ -0.73
VEGFA-212ENST00000480614 C1orf112Q9NSG2 853 aa10.51□□□□□ -0.73
VEGFA-212ENST00000480614 RAB20Q9NX57 234 aa10.51□□□□□ -0.73
VEGFA-212ENST00000480614 KLHL14Q9P2G3 628 aa10.51□□□□□ -0.73
VEGFA-212ENST00000480614 PCDHB15Q9Y5E8 787 aa10.51□□□□□ -0.73
VEGFA-212ENST00000480614 PDE8AO60658 829 aa10.5□□□□□ -0.73
VEGFA-212ENST00000480614 HIBADHP31937 336 aaKnown RBP10.5□□□□□ -0.73
VEGFA-212ENST00000480614 KLHL30Q0D2K2 578 aa10.5□□□□□ -0.73
VEGFA-212ENST00000480614 EIF4A2Q14240 407 aaKnown RBP10.5□□□□□ -0.73
VEGFA-212ENST00000480614 NCAPH2Q6IBW4 605 aa10.5□□□□□ -0.73
VEGFA-212ENST00000480614 FAM81BQ96LP2 452 aa10.5□□□□□ -0.73
VEGFA-212ENST00000480614 CCDC68Q9H2F9 335 aa10.5□□□□□ -0.73
VEGFA-212ENST00000480614 SNX29Q8TEQ0 813 aa10.5□□□□□ -0.73
VEGFA-212ENST00000480614 KRT26Q7Z3Y9 468 aa10.5□□□□□ -0.73
VEGFA-212ENST00000480614 RILPQ96NA2 401 aa10.5□□□□□ -0.73
VEGFA-212ENST00000480614 PPP1R12CQ9BZL4 782 aa10.5□□□□□ -0.73
VEGFA-212ENST00000480614 NFE2L3Q9Y4A8 694 aa10.5□□□□□ -0.73
VEGFA-212ENST00000480614 CHURC1Q8WUH1 139 aa10.5□□□□□ -0.73
VEGFA-212ENST00000480614 EYA2O00167 538 aa10.5□□□□□ -0.73
VEGFA-212ENST00000480614 GNPATO15228 680 aa10.5□□□□□ -0.73
VEGFA-212ENST00000480614 SRGAP2BP0DMP2 458 aa10.5□□□□□ -0.73
VEGFA-212ENST00000480614 HOXA7P31268 230 aaPredicted RBP10.5□□□□□ -0.73
VEGFA-212ENST00000480614 PIK3AP1Q6ZUJ8 805 aa10.5□□□□□ -0.73
VEGFA-212ENST00000480614 ACSBG1Q96GR2 724 aa10.5□□□□□ -0.73
VEGFA-212ENST00000480614 METTL22Q9BUU2 404 aaPredicted RBP10.5□□□□□ -0.73
VEGFA-212ENST00000480614 SLC8A1P32418 973 aa10.5□□□□□ -0.73
VEGFA-212ENST00000480614 STAM2O75886 525 aa10.5□□□□□ -0.73
VEGFA-212ENST00000480614 CD19P15391 556 aa10.5□□□□□ -0.73
VEGFA-212ENST00000480614 EIF6P56537 245 aaKnown RBP10.5□□□□□ -0.73
VEGFA-212ENST00000480614 NFATC2IPQ8NCF5 419 aa10.5□□□□□ -0.73
VEGFA-212ENST00000480614 ORC6Q9Y5N6 252 aa10.5□□□□□ -0.73
VEGFA-212ENST00000480614 ZMYM3Q14202 1370 aa10.5□□□□□ -0.73
VEGFA-212ENST00000480614 ABCD1P33897 745 aa10.5□□□□□ -0.73
VEGFA-212ENST00000480614 GARSP41250 739 aaKnown RBP10.5□□□□□ -0.73
VEGFA-212ENST00000480614 RINT1Q6NUQ1 792 aa10.5□□□□□ -0.73
VEGFA-212ENST00000480614 DEPTORQ8TB45 409 aa10.5□□□□□ -0.73
VEGFA-212ENST00000480614 EPS15L1Q9UBC2 864 aa10.5□□□□□ -0.73
VEGFA-212ENST00000480614 PSPC1Q8WXF1 523 aaKnown RBP10.5□□□□□ -0.73
VEGFA-212ENST00000480614 ARHGEF10O15013 1369 aa10.5□□□□□ -0.73
VEGFA-212ENST00000480614 KIF24Q5T7B8 1368 aa10.49□□□□□ -0.73
VEGFA-212ENST00000480614 LMNB2Q03252 620 aa10.49□□□□□ -0.73
VEGFA-212ENST00000480614 DMP1Q13316 513 aaPredicted RBP10.49□□□□□ -0.73
VEGFA-212ENST00000480614 PKD2L1Q9P0L9 805 aa10.49□□□□□ -0.73
VEGFA-212ENST00000480614 PCP11498 1178 aaKnown RBP10.49□□□□□ -0.73
VEGFA-212ENST00000480614 CHST3Q7LGC8 479 aa10.49□□□□□ -0.73
VEGFA-212ENST00000480614 CCDC124Q96CT7 223 aaKnown RBP10.49□□□□□ -0.73
VEGFA-212ENST00000480614 EDC4Q6P2E9 1401 aaKnown RBP10.49□□□□□ -0.73
VEGFA-212ENST00000480614 TYW5A2RUC4 315 aaKnown RBP10.49□□□□□ -0.73
VEGFA-212ENST00000480614 MAGEA1P43355 309 aa10.49□□□□□ -0.73
VEGFA-212ENST00000480614 PNMA8AQ86V59 439 aaPredicted RBP10.49□□□□□ -0.73
VEGFA-212ENST00000480614 PALM2Q8IXS6 379 aa10.49□□□□□ -0.73
VEGFA-212ENST00000480614 RNF168Q8IYW5 571 aaPredicted RBP10.49□□□□□ -0.73
VEGFA-212ENST00000480614 ZC3H15Q8WU90 426 aaKnown RBP10.49□□□□□ -0.73
VEGFA-212ENST00000480614 SLC27A2O14975 620 aa10.49□□□□□ -0.73
VEGFA-212ENST00000480614 GSTA1P08263 222 aa10.49□□□□□ -0.73
VEGFA-212ENST00000480614 GSTA2P09210 222 aa10.49□□□□□ -0.73
VEGFA-212ENST00000480614 IRX5P78411 483 aaPredicted RBP10.49□□□□□ -0.73
VEGFA-212ENST00000480614 SLC39A6Q13433 755 aa10.49□□□□□ -0.73
VEGFA-212ENST00000480614 LRRC59Q96AG4 307 aaKnown RBP10.49□□□□□ -0.73
VEGFA-212ENST00000480614 ZBTB40Q9NUA8 1239 aa10.49□□□□□ -0.73
VEGFA-212ENST00000480614 PCDHB13Q9Y5F0 798 aa10.49□□□□□ -0.73
VEGFA-212ENST00000480614 GPAA1O43292 621 aa10.49□□□□□ -0.73
VEGFA-212ENST00000480614 MYCLP12524 364 aaPredicted RBP10.49□□□□□ -0.73
VEGFA-212ENST00000480614 ZBTB17Q13105 803 aa10.49□□□□□ -0.73
VEGFA-212ENST00000480614 TNNI3KQ59H18 835 aa10.49□□□□□ -0.73
VEGFA-212ENST00000480614 FPGT-TNNI3KV9GXZ4 949 aa10.49□□□□□ -0.73
VEGFA-212ENST00000480614 F8W8V4 182 aa10.49□□□□□ -0.73
VEGFA-212ENST00000480614 TRIM42Q8IWZ5 723 aa10.49□□□□□ -0.73
VEGFA-212ENST00000480614 IFT122Q9HBG6 1241 aa10.49□□□□□ -0.73
VEGFA-212ENST00000480614 TSPYL2Q9H2G4 693 aaPredicted RBP10.49□□□□□ -0.73
VEGFA-212ENST00000480614 LRWD1Q9UFC0 647 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms