RNA–Protein interactions for RNA: ENST00000480549.5

SH3D21-203, Transcript of SH3 domain containing 21, humanhuman

TSL 2

Gene SH3D21, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-203ENST00000480549 SLC44A5Q8NCS7 719 aa19.25■□□□□ 0.67
SH3D21-203ENST00000480549 MASTLQ96GX5 879 aa19.25■□□□□ 0.67
SH3D21-203ENST00000480549 V9GY48 417 aaPredicted RBP19.25■□□□□ 0.67
SH3D21-203ENST00000480549 FLT1P17948 1338 aa19.25■□□□□ 0.67
SH3D21-203ENST00000480549 hCG_1642624A0A1W2PR95 340 aa19.25■□□□□ 0.67
SH3D21-203ENST00000480549 AMOTL1Q8IY63 956 aa19.25■□□□□ 0.67
SH3D21-203ENST00000480549 TEX11Q8IYF3 940 aa19.25■□□□□ 0.67
SH3D21-203ENST00000480549 PHF20Q9BVI0 1012 aa19.25■□□□□ 0.67
SH3D21-203ENST00000480549 DNAJC25Q9H1X3 360 aa19.25■□□□□ 0.67
SH3D21-203ENST00000480549 VPS54Q9P1Q0 977 aa19.25■□□□□ 0.67
SH3D21-203ENST00000480549 RSPH14Q9UHP6 348 aa19.25■□□□□ 0.67
SH3D21-203ENST00000480549 ADAMTSL1Q8N6G6 1762 aa19.25■□□□□ 0.67
SH3D21-203ENST00000480549 SNED1Q8TER0 1413 aa19.24■□□□□ 0.67
SH3D21-203ENST00000480549 PFKFB1P16118 471 aa19.24■□□□□ 0.67
SH3D21-203ENST00000480549 AKAP17AQ02040 695 aaKnown RBP19.24■□□□□ 0.67
SH3D21-203ENST00000480549 DGKHQ86XP1 1220 aa19.24■□□□□ 0.67
SH3D21-203ENST00000480549 PLCG2P16885 1265 aa19.24■□□□□ 0.67
SH3D21-203ENST00000480549 SLF2Q8IX21 1173 aa19.24■□□□□ 0.67
SH3D21-203ENST00000480549 CTCFLQ8NI51 663 aaPredicted RBP19.24■□□□□ 0.67
SH3D21-203ENST00000480549 SHC4Q6S5L8 630 aa19.24■□□□□ 0.67
SH3D21-203ENST00000480549 CERS5Q8N5B7 392 aa19.24■□□□□ 0.67
SH3D21-203ENST00000480549 MKNK2Q9HBH9 465 aa19.24■□□□□ 0.67
SH3D21-203ENST00000480549 TCP11L1Q9NUJ3 509 aa19.24■□□□□ 0.67
SH3D21-203ENST00000480549 HPSEQ9Y251 543 aa19.24■□□□□ 0.67
SH3D21-203ENST00000480549 DAGLAQ9Y4D2 1042 aa19.24■□□□□ 0.67
SH3D21-203ENST00000480549 FAM237AA0A1B0GTK4 181 aa19.23■□□□□ 0.67
SH3D21-203ENST00000480549 RASA1P20936 1047 aa19.23■□□□□ 0.67
SH3D21-203ENST00000480549 JMYQ8N9B5 988 aa19.23■□□□□ 0.67
SH3D21-203ENST00000480549 DPP8Q6V1X1 898 aaPredicted RBP19.23■□□□□ 0.67
SH3D21-203ENST00000480549 ZC3H12CQ9C0D7 883 aaKnown RBP19.23■□□□□ 0.67
SH3D21-203ENST00000480549 KCNF1Q9H3M0 494 aa19.23■□□□□ 0.67
SH3D21-203ENST00000480549 ZNF646O15015 1829 aaPredicted RBP19.23■□□□□ 0.67
SH3D21-203ENST00000480549 USP17L3A6NCW0 530 aa19.22■□□□□ 0.67
SH3D21-203ENST00000480549 USP17L4A6NCW7 530 aa19.22■□□□□ 0.67
SH3D21-203ENST00000480549 ZNF202O95125 648 aa19.22■□□□□ 0.67
SH3D21-203ENST00000480549 RAD51AP2Q09MP3 1159 aa19.22■□□□□ 0.67
SH3D21-203ENST00000480549 RILPL1Q5EBL4 403 aa19.22■□□□□ 0.67
SH3D21-203ENST00000480549 USP17L1Q7RTZ2 530 aa19.22■□□□□ 0.67
SH3D21-203ENST00000480549 ZNF165P49910 485 aa19.22■□□□□ 0.67
SH3D21-203ENST00000480549 STX1AQ16623 288 aa19.22■□□□□ 0.67
SH3D21-203ENST00000480549 C11orf57Q6ZUT1 292 aaPredicted RBP19.22■□□□□ 0.67
SH3D21-203ENST00000480549 C16orf86Q6ZW13 317 aa19.22■□□□□ 0.67
SH3D21-203ENST00000480549 ERCC4Q92889 916 aaPredicted RBP19.22■□□□□ 0.67
SH3D21-203ENST00000480549 KAT14Q9H8E8 782 aa19.22■□□□□ 0.67
SH3D21-203ENST00000480549 SUGT1Q9Y2Z0 365 aa19.22■□□□□ 0.67
SH3D21-203ENST00000480549 CAVIN2O95810 425 aa19.22■□□□□ 0.67
SH3D21-203ENST00000480549 NPY5RQ15761 445 aa19.22■□□□□ 0.67
SH3D21-203ENST00000480549 RESP18Q5W5W9 173 aa19.22■□□□□ 0.67
SH3D21-203ENST00000480549 C16orf45Q96MC5 204 aaPredicted RBP19.22■□□□□ 0.67
SH3D21-203ENST00000480549 CLIC6Q96NY7 704 aa19.22■□□□□ 0.67
SH3D21-203ENST00000480549 SLX4Q8IY92 1834 aa19.22■□□□□ 0.67
SH3D21-203ENST00000480549 TSPY3P0CV98 308 aa19.21■□□□□ 0.67
SH3D21-203ENST00000480549 TSPY8P0CW00 308 aa19.21■□□□□ 0.67
SH3D21-203ENST00000480549 XBP1P17861 261 aa19.21■□□□□ 0.67
SH3D21-203ENST00000480549 CUTAO60888 179 aa19.21■□□□□ 0.67
SH3D21-203ENST00000480549 PNMA1Q8ND90 353 aa19.21■□□□□ 0.67
SH3D21-203ENST00000480549 SDF4Q9BRK5 362 aa19.21■□□□□ 0.67
SH3D21-203ENST00000480549 RGS17Q9UGC6 210 aaPredicted RBP19.21■□□□□ 0.67
SH3D21-203ENST00000480549 BAZ2BQ9UIF8 2168 aaKnown RBP19.21■□□□□ 0.67
SH3D21-203ENST00000480549 CDK8P49336 464 aa19.2■□□□□ 0.66
SH3D21-203ENST00000480549 IQCB1Q15051 598 aa19.2■□□□□ 0.66
SH3D21-203ENST00000480549 DOK7Q18PE1 504 aa19.2■□□□□ 0.66
SH3D21-203ENST00000480549 ZNF444Q8N0Y2 327 aaPredicted RBP19.2■□□□□ 0.66
SH3D21-203ENST00000480549 PCDHB6Q9Y5E3 794 aa19.2■□□□□ 0.66
SH3D21-203ENST00000480549 A0A087WWV3 80 aa19.2■□□□□ 0.66
SH3D21-203ENST00000480549 KRT2P35908 639 aa19.2■□□□□ 0.66
SH3D21-203ENST00000480549 CCDC178Q5BJE1 867 aa19.2■□□□□ 0.66
SH3D21-203ENST00000480549 EARS2Q5JPH6 523 aaKnown RBP19.2■□□□□ 0.66
SH3D21-203ENST00000480549 FAM205CA6NFA0 338 aa19.2■□□□□ 0.66
SH3D21-203ENST00000480549 TNFRSF25Q93038 417 aa19.2■□□□□ 0.66
SH3D21-203ENST00000480549 MXD3Q9BW11 206 aa19.2■□□□□ 0.66
SH3D21-203ENST00000480549 CABP5Q9NP86 173 aa19.2■□□□□ 0.66
SH3D21-203ENST00000480549 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.2■□□□□ 0.66
SH3D21-203ENST00000480549 V9GYY5 206 aaPredicted RBP19.2■□□□□ 0.66
SH3D21-203ENST00000480549 GRM4Q14833 912 aa19.19■□□□□ 0.66
SH3D21-203ENST00000480549 EFCC1Q9HA90 598 aa19.19■□□□□ 0.66
SH3D21-203ENST00000480549 KIAA1468Q9P260 1216 aa19.19■□□□□ 0.66
SH3D21-203ENST00000480549 FBXO2Q9UK22 296 aaPredicted RBP19.19■□□□□ 0.66
SH3D21-203ENST00000480549 KIF5BP33176 963 aa19.19■□□□□ 0.66
SH3D21-203ENST00000480549 C2CD5Q86YS7 1000 aa19.19■□□□□ 0.66
SH3D21-203ENST00000480549 KRI1Q8N9T8 703 aaKnown RBP19.19■□□□□ 0.66
SH3D21-203ENST00000480549 FBXW7Q969H0 707 aa19.19■□□□□ 0.66
SH3D21-203ENST00000480549 ZNF622Q969S3 477 aaKnown RBP eCLIP19.19■□□□□ 0.661e-7■□□□□ 10.6
SH3D21-203ENST00000480549 GEMIN8Q9NWZ8 242 aaKnown RBP19.19■□□□□ 0.66
SH3D21-203ENST00000480549 KCNG1Q9UIX4 513 aa19.19■□□□□ 0.66
SH3D21-203ENST00000480549 PRR29P0C7W0 189 aa19.18■□□□□ 0.66
SH3D21-203ENST00000480549 VEGFAP15692 232 aaPredicted RBP19.18■□□□□ 0.66
SH3D21-203ENST00000480549 PSEN1P49768 467 aa19.18■□□□□ 0.66
SH3D21-203ENST00000480549 PFKFB3Q16875 520 aaPredicted RBP19.18■□□□□ 0.66
SH3D21-203ENST00000480549 ZNF287Q9HBT7 754 aa19.18■□□□□ 0.66
SH3D21-203ENST00000480549 MYH8P13535 1937 aa19.18■□□□□ 0.66
SH3D21-203ENST00000480549 SCG2P13521 617 aa19.18■□□□□ 0.66
SH3D21-203ENST00000480549 SYKP43405 635 aa19.18■□□□□ 0.66
SH3D21-203ENST00000480549 MMP14P50281 582 aa19.18■□□□□ 0.66
SH3D21-203ENST00000480549 STAG2Q8N3U4 1231 aa19.18■□□□□ 0.66
SH3D21-203ENST00000480549 ANO10Q9NW15 660 aa19.18■□□□□ 0.66
SH3D21-203ENST00000480549 MAD2L2Q9UI95 211 aa19.18■□□□□ 0.66
SH3D21-203ENST00000480549 F8W031 263 aaPredicted RBP19.18■□□□□ 0.66
SH3D21-203ENST00000480549 PTPREP23469 700 aa19.18■□□□□ 0.66
SH3D21-203ENST00000480549 GTF2A1P52655 376 aaPredicted RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms