RNA–Protein interactions for RNA: ENST00000479596.5

CCNL1-222, Transcript of cyclin L1, humanhuman

TSL 3

Gene CCNL1, Length 883 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-222ENST00000479596 TRIB2Q92519 343 aa18.01■□□□□ 0.47
CCNL1-222ENST00000479596 FOXP2O15409 715 aa18■□□□□ 0.47
CCNL1-222ENST00000479596 HMGCRP04035 888 aa18■□□□□ 0.47
CCNL1-222ENST00000479596 GNAT2P19087 354 aa18■□□□□ 0.47
CCNL1-222ENST00000479596 PDE1AP54750 535 aa18■□□□□ 0.47
CCNL1-222ENST00000479596 MORN1Q5T089 497 aa18■□□□□ 0.47
CCNL1-222ENST00000479596 SMC5Q8IY18 1101 aa18■□□□□ 0.47
CCNL1-222ENST00000479596 EXOC6Q8TAG9 804 aa18■□□□□ 0.47
CCNL1-222ENST00000479596 NKX2-3Q8TAU0 364 aa18■□□□□ 0.47
CCNL1-222ENST00000479596 SOCS4Q8WXH5 440 aa18■□□□□ 0.47
CCNL1-222ENST00000479596 VCPKMTQ9H867 229 aa18■□□□□ 0.47
CCNL1-222ENST00000479596 ARHGEF10LQ9HCE6 1279 aa18■□□□□ 0.47
CCNL1-222ENST00000479596 MINDY4BA8MYZ0 360 aa17.99■□□□□ 0.47
CCNL1-222ENST00000479596 PATL2C9JE40 543 aaKnown RBP17.99■□□□□ 0.47
CCNL1-222ENST00000479596 SGPL1O95470 568 aa17.99■□□□□ 0.47
CCNL1-222ENST00000479596 EEF2P13639 858 aaKnown RBP17.99■□□□□ 0.47
CCNL1-222ENST00000479596 CYP2B6P20813 491 aa17.99■□□□□ 0.47
CCNL1-222ENST00000479596 LRRFIP1Q32MZ4 808 aaKnown RBP17.99■□□□□ 0.47
CCNL1-222ENST00000479596 PLEKHH3Q7Z736 793 aa17.99■□□□□ 0.47
CCNL1-222ENST00000479596 IFNL3Q8IZI9 196 aa17.99■□□□□ 0.47
CCNL1-222ENST00000479596 SPICE1Q8N0Z3 855 aa17.99■□□□□ 0.47
CCNL1-222ENST00000479596 LPAR1Q92633 364 aa17.99■□□□□ 0.47
CCNL1-222ENST00000479596 NUDT12Q9BQG2 462 aa17.99■□□□□ 0.47
CCNL1-222ENST00000479596 TANGO6Q9C0B7 1094 aa17.99■□□□□ 0.47
CCNL1-222ENST00000479596 KANSL2Q9H9L4 492 aa17.99■□□□□ 0.47
CCNL1-222ENST00000479596 IGHDP01880 384 aa17.98■□□□□ 0.47
CCNL1-222ENST00000479596 XRCC5P13010 732 aaKnown RBP17.98■□□□□ 0.47
CCNL1-222ENST00000479596 TDO2P48775 406 aa17.98■□□□□ 0.47
CCNL1-222ENST00000479596 COG2Q14746 738 aa17.98■□□□□ 0.47
CCNL1-222ENST00000479596 STK11IPQ8N1F8 1099 aa17.98■□□□□ 0.47
CCNL1-222ENST00000479596 DEFB118Q96PH6 123 aa17.98■□□□□ 0.47
CCNL1-222ENST00000479596 SH2D4AQ9H788 454 aa17.98■□□□□ 0.47
CCNL1-222ENST00000479596 PARP14Q460N5 1801 aa17.98■□□□□ 0.47
CCNL1-222ENST00000479596 IGKV6D-41A0A0C4DH26 115 aa17.97■□□□□ 0.47
CCNL1-222ENST00000479596 MAP3K21Q5TCX8 1036 aa17.97■□□□□ 0.47
CCNL1-222ENST00000479596 CCDC129Q6ZRS4 1044 aa17.97■□□□□ 0.47
CCNL1-222ENST00000479596 LNPKQ9C0E8 428 aa17.97■□□□□ 0.47
CCNL1-222ENST00000479596 CRISPLD2Q9H0B8 497 aa17.97■□□□□ 0.47
CCNL1-222ENST00000479596 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.97■□□□□ 0.472e-7■■■□□ 18.8
CCNL1-222ENST00000479596 ZBTB47Q9UFB7 747 aaPredicted RBP17.97■□□□□ 0.47
CCNL1-222ENST00000479596 WDR46O15213 610 aaKnown RBP17.96■□□□□ 0.47
CCNL1-222ENST00000479596 APPP05067 770 aa17.96■□□□□ 0.47
CCNL1-222ENST00000479596 DSG3P32926 999 aa17.96■□□□□ 0.47
CCNL1-222ENST00000479596 CCNA1P78396 465 aa17.96■□□□□ 0.47
CCNL1-222ENST00000479596 ATP2B2Q01814 1243 aa17.96■□□□□ 0.47
CCNL1-222ENST00000479596 CCL14Q16627 93 aa17.96■□□□□ 0.47
CCNL1-222ENST00000479596 EVI5LQ96CN4 794 aa17.96■□□□□ 0.47
CCNL1-222ENST00000479596 HOXC10Q9NYD6 342 aa17.96■□□□□ 0.47
CCNL1-222ENST00000479596 PRDM1O75626 825 aa17.95■□□□□ 0.46
CCNL1-222ENST00000479596 PTPREP23469 700 aa17.95■□□□□ 0.46
CCNL1-222ENST00000479596 RGS2P41220 211 aa17.95■□□□□ 0.46
CCNL1-222ENST00000479596 MAP2K5Q13163 448 aa17.95■□□□□ 0.46
CCNL1-222ENST00000479596 GRB14Q14449 540 aa17.95■□□□□ 0.46
CCNL1-222ENST00000479596 CCAR1Q8IX12 1150 aaKnown RBP17.95■□□□□ 0.46
CCNL1-222ENST00000479596 ATG4CQ96DT6 458 aa17.95■□□□□ 0.46
CCNL1-222ENST00000479596 APBA2Q99767 749 aa17.95■□□□□ 0.46
CCNL1-222ENST00000479596 MOV10L1Q9BXT6 1211 aaKnown RBP17.95■□□□□ 0.46
CCNL1-222ENST00000479596 RWDD1Q9H446 243 aaPredicted RBP17.95■□□□□ 0.46
CCNL1-222ENST00000479596 MKNK2Q9HBH9 465 aa17.95■□□□□ 0.46
CCNL1-222ENST00000479596 RPTORQ8N122 1335 aa17.95■□□□□ 0.46
CCNL1-222ENST00000479596 FLOT1O75955 427 aa17.94■□□□□ 0.46
CCNL1-222ENST00000479596 FARP2O94887 1054 aaPredicted RBP17.94■□□□□ 0.46
CCNL1-222ENST00000479596 PRKAR2AP13861 404 aaKnown RBP17.94■□□□□ 0.46
CCNL1-222ENST00000479596 ZKSCAN1P17029 563 aaPredicted RBP17.94■□□□□ 0.46
CCNL1-222ENST00000479596 VPS53Q5VIR6 699 aa17.94■□□□□ 0.46
CCNL1-222ENST00000479596 B4GALNT3Q6L9W6 998 aa17.94■□□□□ 0.46
CCNL1-222ENST00000479596 NACAP1Q9BZK3 213 aa17.94■□□□□ 0.46
CCNL1-222ENST00000479596 SPATC1LQ9H0A9 340 aa17.94■□□□□ 0.46
CCNL1-222ENST00000479596 FBXO28Q9NVF7 368 aa17.94■□□□□ 0.46
CCNL1-222ENST00000479596 FLRT1Q9NZU1 646 aa17.94■□□□□ 0.46
CCNL1-222ENST00000479596 NYAP2Q9P242 653 aa17.94■□□□□ 0.46
CCNL1-222ENST00000479596 ADAMTS5Q9UNA0 930 aa17.94■□□□□ 0.46
CCNL1-222ENST00000479596 ZNF236Q9UL36 1845 aa17.93■□□□□ 0.46
CCNL1-222ENST00000479596 PLIN4Q96Q06 1357 aa17.93■□□□□ 0.46
CCNL1-222ENST00000479596 SLC15A5A6NIM6 579 aa17.93■□□□□ 0.46
CCNL1-222ENST00000479596 HOXC6P09630 235 aa17.93■□□□□ 0.46
CCNL1-222ENST00000479596 NUCB1Q02818 461 aa17.93■□□□□ 0.46
CCNL1-222ENST00000479596 PPARAQ07869 468 aa17.93■□□□□ 0.46
CCNL1-222ENST00000479596 CACNB2Q08289 660 aaPredicted RBP17.93■□□□□ 0.46
CCNL1-222ENST00000479596 WDR78Q5VTH9 848 aa17.93■□□□□ 0.46
CCNL1-222ENST00000479596 CHD1LQ86WJ1 897 aa17.93■□□□□ 0.46
CCNL1-222ENST00000479596 TRMT44Q8IYL2 757 aaKnown RBP17.93■□□□□ 0.46
CCNL1-222ENST00000479596 MB21D1Q8N884 522 aa17.93■□□□□ 0.46
CCNL1-222ENST00000479596 FAM227BQ96M60 508 aa17.93■□□□□ 0.46
CCNL1-222ENST00000479596 NAPBQ9H115 298 aa17.93■□□□□ 0.46
CCNL1-222ENST00000479596 GOPCQ9HD26 462 aa17.93■□□□□ 0.46
CCNL1-222ENST00000479596 HMX1Q9NP08 348 aaPredicted RBP17.93■□□□□ 0.46
CCNL1-222ENST00000479596 SUPT16HQ9Y5B9 1047 aaKnown RBP17.93■□□□□ 0.46
CCNL1-222ENST00000479596 A0A0D9SFI3 127 aa17.92■□□□□ 0.46
CCNL1-222ENST00000479596 IGHA2P01877 340 aa17.92■□□□□ 0.46
CCNL1-222ENST00000479596 TFRCP02786 760 aaKnown RBP17.92■□□□□ 0.46
CCNL1-222ENST00000479596 ERCC3P19447 782 aa17.92■□□□□ 0.46
CCNL1-222ENST00000479596 MNX1P50219 401 aaPredicted RBP17.92■□□□□ 0.46
CCNL1-222ENST00000479596 FAM83BQ5T0W9 1011 aa17.92■□□□□ 0.46
CCNL1-222ENST00000479596 SHCBP1Q8NEM2 672 aa17.92■□□□□ 0.46
CCNL1-222ENST00000479596 CWC22Q9HCG8 908 aaKnown RBP17.92■□□□□ 0.46
CCNL1-222ENST00000479596 TACC3Q9Y6A5 838 aa17.92■□□□□ 0.46
CCNL1-222ENST00000479596 NDUFB10O96000 172 aa17.91■□□□□ 0.46
CCNL1-222ENST00000479596 CAPN2P17655 700 aa17.91■□□□□ 0.46
CCNL1-222ENST00000479596 TMEM132BQ14DG7 1078 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms