RNA–Protein interactions for RNA: ENST00000479539.1

SP140-210, Transcript of SP140 nuclear body protein, humanhuman

TSL 5

Gene SP140, Length 550 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-210ENST00000479539 KIAA1755Q5JYT7 1200 aa12.56□□□□□ -0.4
SP140-210ENST00000479539 VPS53Q5VIR6 699 aa12.56□□□□□ -0.4
SP140-210ENST00000479539 CLEC10AQ8IUN9 316 aa12.56□□□□□ -0.4
SP140-210ENST00000479539 STK11IPQ8N1F8 1099 aa12.56□□□□□ -0.4
SP140-210ENST00000479539 LPAR1Q92633 364 aa12.56□□□□□ -0.4
SP140-210ENST00000479539 COA7Q96BR5 231 aa12.56□□□□□ -0.4
SP140-210ENST00000479539 RPAP3Q9H6T3 665 aaPredicted RBP12.56□□□□□ -0.4
SP140-210ENST00000479539 VCPKMTQ9H867 229 aa12.56□□□□□ -0.4
SP140-210ENST00000479539 HOXC10Q9NYD6 342 aa12.56□□□□□ -0.4
SP140-210ENST00000479539 GJD2Q9UKL4 321 aa12.56□□□□□ -0.4
SP140-210ENST00000479539 GABRQQ9UN88 632 aa12.56□□□□□ -0.4
SP140-210ENST00000479539 RABGAP1Q9Y3P9 1069 aa12.56□□□□□ -0.4
SP140-210ENST00000479539 CDK5RAP2Q96SN8 1893 aa12.55□□□□□ -0.4
SP140-210ENST00000479539 IGKV6D-41A0A0C4DH26 115 aa12.55□□□□□ -0.4
SP140-210ENST00000479539 PRDM1O75626 825 aa12.55□□□□□ -0.4
SP140-210ENST00000479539 CNMDO75829 334 aa12.55□□□□□ -0.4
SP140-210ENST00000479539 SLC3A2P08195 630 aaKnown RBP12.55□□□□□ -0.4
SP140-210ENST00000479539 GRK4P32298 578 aa12.55□□□□□ -0.4
SP140-210ENST00000479539 ERVK-9P63128 1117 aa12.55□□□□□ -0.4
SP140-210ENST00000479539 ERVK-24P63145 666 aa12.55□□□□□ -0.4
SP140-210ENST00000479539 PDE4BQ07343 736 aa12.55□□□□□ -0.4
SP140-210ENST00000479539 COG2Q14746 738 aa12.55□□□□□ -0.4
SP140-210ENST00000479539 ZNF444Q8N0Y2 327 aaPredicted RBP12.55□□□□□ -0.4
SP140-210ENST00000479539 SH3TC2Q8TF17 1288 aa12.55□□□□□ -0.4
SP140-210ENST00000479539 NYAP2Q9P242 653 aa12.55□□□□□ -0.4
SP140-210ENST00000479539 ANAPC4Q9UJX5 808 aa12.55□□□□□ -0.4
SP140-210ENST00000479539 SPDYE16A6NNV3 312 aaPredicted RBP12.54□□□□□ -0.4
SP140-210ENST00000479539 PEX10O60683 326 aa12.54□□□□□ -0.4
SP140-210ENST00000479539 FGAP02671 866 aa12.54□□□□□ -0.4
SP140-210ENST00000479539 HSPD1P10809 573 aaKnown RBP12.54□□□□□ -0.4
SP140-210ENST00000479539 MLLT1Q03111 559 aaPredicted RBP12.54□□□□□ -0.4
SP140-210ENST00000479539 ZNF589Q86UQ0 364 aaPredicted RBP12.54□□□□□ -0.4
SP140-210ENST00000479539 SLAIN1Q8ND83 568 aa12.54□□□□□ -0.4
SP140-210ENST00000479539 NEDD1Q8NHV4 660 aa12.54□□□□□ -0.4
SP140-210ENST00000479539 PXYLP1Q8TE99 480 aa12.54□□□□□ -0.4
SP140-210ENST00000479539 MKL1Q969V6 931 aa12.54□□□□□ -0.4
SP140-210ENST00000479539 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.54□□□□□ -0.4
SP140-210ENST00000479539 MYH1P12882 1939 aa12.54□□□□□ -0.4
SP140-210ENST00000479539 HIP1O00291 1037 aa12.53□□□□□ -0.4
SP140-210ENST00000479539 WDR46O15213 610 aaKnown RBP12.53□□□□□ -0.4
SP140-210ENST00000479539 ADCY3O60266 1144 aa12.53□□□□□ -0.4
SP140-210ENST00000479539 FGRP09769 529 aa12.53□□□□□ -0.4
SP140-210ENST00000479539 MAPK4P31152 587 aa12.53□□□□□ -0.4
SP140-210ENST00000479539 ATP2B2Q01814 1243 aa12.53□□□□□ -0.4
SP140-210ENST00000479539 SPICE1Q8N0Z3 855 aa12.53□□□□□ -0.4
SP140-210ENST00000479539 PAGR1Q9BTK6 254 aa12.53□□□□□ -0.4
SP140-210ENST00000479539 TMEM106CQ9BVX2 250 aa12.53□□□□□ -0.4
SP140-210ENST00000479539 PORCNQ9H237 461 aa12.53□□□□□ -0.4
SP140-210ENST00000479539 MTMR4Q9NYA4 1195 aa12.53□□□□□ -0.4
SP140-210ENST00000479539 BTBD7Q9P203 1132 aa12.53□□□□□ -0.4
SP140-210ENST00000479539 CCDC171Q6TFL3 1326 aa12.53□□□□□ -0.4
SP140-210ENST00000479539 LOC285556D6RIA3 1793 aa12.52□□□□□ -0.41
SP140-210ENST00000479539 POTEFA5A3E0 1075 aa12.52□□□□□ -0.41
SP140-210ENST00000479539 MFAP1P55081 439 aaKnown RBP12.52□□□□□ -0.41
SP140-210ENST00000479539 CCNA1P78396 465 aa12.52□□□□□ -0.41
SP140-210ENST00000479539 TFAP4Q01664 338 aa12.52□□□□□ -0.41
SP140-210ENST00000479539 CTDSPL2Q05D32 466 aa12.52□□□□□ -0.41
SP140-210ENST00000479539 TTC22Q5TAA0 569 aa12.52□□□□□ -0.41
SP140-210ENST00000479539 CEP95Q96GE4 821 aa12.52□□□□□ -0.41
SP140-210ENST00000479539 TANGO6Q9C0B7 1094 aa12.52□□□□□ -0.41
SP140-210ENST00000479539 GOPCQ9HD26 462 aa12.52□□□□□ -0.41
SP140-210ENST00000479539 CLIP2Q9UDT6 1046 aa12.52□□□□□ -0.41
SP140-210ENST00000479539 SYNPO2Q9UMS6 1093 aa12.52□□□□□ -0.41
SP140-210ENST00000479539 TACC3Q9Y6A5 838 aa12.52□□□□□ -0.41
SP140-210ENST00000479539 ZMYM6O95789 1325 aa12.52□□□□□ -0.41
SP140-210ENST00000479539 KIAA0100Q14667 2235 aaKnown RBP12.52□□□□□ -0.41
SP140-210ENST00000479539 NAV1Q8NEY1 1877 aa12.51□□□□□ -0.41
SP140-210ENST00000479539 PTPRFP10586 1907 aa12.51□□□□□ -0.41
SP140-210ENST00000479539 F5H6K3 240 aa12.51□□□□□ -0.41
SP140-210ENST00000479539 ORC4O43929 436 aa12.51□□□□□ -0.41
SP140-210ENST00000479539 FLOT1O75955 427 aa12.51□□□□□ -0.41
SP140-210ENST00000479539 TTLL1O95922 423 aa12.51□□□□□ -0.41
SP140-210ENST00000479539 TSPY3P0CV98 308 aa12.51□□□□□ -0.41
SP140-210ENST00000479539 TSPY8P0CW00 308 aa12.51□□□□□ -0.41
SP140-210ENST00000479539 XRCC5P13010 732 aaKnown RBP12.51□□□□□ -0.41
SP140-210ENST00000479539 GSPT1P15170 499 aaKnown RBP12.51□□□□□ -0.41
SP140-210ENST00000479539 ELNP15502 786 aa12.51□□□□□ -0.41
SP140-210ENST00000479539 UBXN2AP68543 259 aa12.51□□□□□ -0.41
SP140-210ENST00000479539 KLRC3Q07444 240 aa12.51□□□□□ -0.41
SP140-210ENST00000479539 MTFR1Q15390 333 aa12.51□□□□□ -0.41
SP140-210ENST00000479539 FAM47AQ5JRC9 791 aa12.51□□□□□ -0.41
SP140-210ENST00000479539 CWC27Q6UX04 472 aaKnown RBP12.51□□□□□ -0.41
SP140-210ENST00000479539 GPR142Q7Z601 462 aa12.51□□□□□ -0.41
SP140-210ENST00000479539 PLEKHH3Q7Z736 793 aa12.51□□□□□ -0.41
SP140-210ENST00000479539 MB21D1Q8N884 522 aa12.51□□□□□ -0.41
SP140-210ENST00000479539 USP6NLQ92738 828 aa12.51□□□□□ -0.41
SP140-210ENST00000479539 INCENPQ9NQS7 918 aa12.51□□□□□ -0.41
SP140-210ENST00000479539 DIAPH3Q9NSV4 1193 aa12.51□□□□□ -0.41
SP140-210ENST00000479539 ADAMTS5Q9UNA0 930 aa12.51□□□□□ -0.41
SP140-210ENST00000479539 PLIN4Q96Q06 1357 aa12.51□□□□□ -0.41
SP140-210ENST00000479539 NDUFB10O96000 172 aa12.5□□□□□ -0.41
SP140-210ENST00000479539 EN2P19622 333 aaPredicted RBP12.5□□□□□ -0.41
SP140-210ENST00000479539 PPP4R3BQ5MIZ7 849 aa12.5□□□□□ -0.41
SP140-210ENST00000479539 MORN1Q5T089 497 aa12.5□□□□□ -0.41
SP140-210ENST00000479539 CCAR1Q8IX12 1150 aaKnown RBP12.5□□□□□ -0.41
SP140-210ENST00000479539 SOCS4Q8WXH5 440 aa12.5□□□□□ -0.41
SP140-210ENST00000479539 ATG4CQ96DT6 458 aa12.5□□□□□ -0.41
SP140-210ENST00000479539 NUDT12Q9BQG2 462 aa12.5□□□□□ -0.41
SP140-210ENST00000479539 BIN2Q9UBW5 565 aaPredicted RBP12.5□□□□□ -0.41
SP140-210ENST00000479539 MYCP01106 439 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms