RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 CRNKL1Q9BZJ0 848 aaKnown RBP27.97■■■□□ 2.07
SYNGAP1-206ENST00000479510 ITIH6Q6UXX5 1313 aa27.97■■■□□ 2.07
SYNGAP1-206ENST00000479510 ATP8B1O43520 1251 aa27.96■■■□□ 2.07
SYNGAP1-206ENST00000479510 CLCN6P51797 869 aa27.96■■■□□ 2.07
SYNGAP1-206ENST00000479510 GNG11P61952 73 aa27.96■■■□□ 2.07
SYNGAP1-206ENST00000479510 SBK1Q52WX2 424 aa27.96■■■□□ 2.07
SYNGAP1-206ENST00000479510 PPFIBP1Q86W92 1011 aa27.96■■■□□ 2.07
SYNGAP1-206ENST00000479510 COL5A3P25940 1745 aaPredicted RBP27.96■■■□□ 2.07
SYNGAP1-206ENST00000479510 PPP1R3GB7ZBB8 358 aa27.96■■■□□ 2.07
SYNGAP1-206ENST00000479510 PRDM1O75626 825 aa27.96■■■□□ 2.07
SYNGAP1-206ENST00000479510 CCDC175P0C221 793 aa27.96■■■□□ 2.07
SYNGAP1-206ENST00000479510 TOGARAM2Q6ZUX3 1019 aa27.96■■■□□ 2.07
SYNGAP1-206ENST00000479510 ZNF384Q8TF68 577 aa27.96■■■□□ 2.07
SYNGAP1-206ENST00000479510 NSUN4Q96CB9 384 aaKnown RBP27.96■■■□□ 2.07
SYNGAP1-206ENST00000479510 NRAPQ86VF7 1730 aa27.95■■■□□ 2.07
SYNGAP1-206ENST00000479510 USP17L12C9JPN9 530 aa27.95■■■□□ 2.07
SYNGAP1-206ENST00000479510 USP17L21D6R901 530 aa27.95■■■□□ 2.07
SYNGAP1-206ENST00000479510 AFMP43652 599 aa27.95■■■□□ 2.07
SYNGAP1-206ENST00000479510 ARPP21Q9UBL0 812 aaPredicted RBP27.95■■■□□ 2.07
SYNGAP1-206ENST00000479510 ROBO1Q9Y6N7 1651 aa27.95■■■□□ 2.06
SYNGAP1-206ENST00000479510 SCG2P13521 617 aa27.95■■■□□ 2.06
SYNGAP1-206ENST00000479510 CD44P16070 742 aaKnown RBP27.95■■■□□ 2.06
SYNGAP1-206ENST00000479510 ACSBG1Q96GR2 724 aa27.95■■■□□ 2.06
SYNGAP1-206ENST00000479510 CARD6Q9BX69 1037 aa27.95■■■□□ 2.06
SYNGAP1-206ENST00000479510 MRFAP1Q9Y605 127 aa27.95■■■□□ 2.06
SYNGAP1-206ENST00000479510 CYP2D7A0A087X1C5 515 aa27.94■■■□□ 2.06
SYNGAP1-206ENST00000479510 NPHP1O15259 732 aa27.94■■■□□ 2.06
SYNGAP1-206ENST00000479510 FECHP22830 423 aa27.94■■■□□ 2.06
SYNGAP1-206ENST00000479510 PTGDRQ13258 359 aa27.94■■■□□ 2.06
SYNGAP1-206ENST00000479510 ZNF174Q15697 407 aa27.94■■■□□ 2.06
SYNGAP1-206ENST00000479510 E2F4Q16254 413 aa27.94■■■□□ 2.06
SYNGAP1-206ENST00000479510 PTPN21Q16825 1174 aa27.94■■■□□ 2.06
SYNGAP1-206ENST00000479510 ARL6IP4Q66PJ3 421 aaKnown RBP27.94■■■□□ 2.06
SYNGAP1-206ENST00000479510 KIFC2Q96AC6 838 aa27.94■■■□□ 2.06
SYNGAP1-206ENST00000479510 SMIM22K7EJ46 135 aa27.93■■■□□ 2.06
SYNGAP1-206ENST00000479510 CALML3P27482 149 aa27.93■■■□□ 2.06
SYNGAP1-206ENST00000479510 PFKFB3Q16875 520 aaPredicted RBP27.93■■■□□ 2.06
SYNGAP1-206ENST00000479510 SRBD1Q8N5C6 995 aaKnown RBP27.93■■■□□ 2.06
SYNGAP1-206ENST00000479510 IGSF22Q8N9C0 903 aa27.93■■■□□ 2.06
SYNGAP1-206ENST00000479510 BAZ2AQ9UIF9 1905 aaKnown RBP27.93■■■□□ 2.06
SYNGAP1-206ENST00000479510 LAMB1P07942 1786 aa27.93■■■□□ 2.06
SYNGAP1-206ENST00000479510 KIF5BP33176 963 aa27.93■■■□□ 2.06
SYNGAP1-206ENST00000479510 SPAG1Q07617 926 aa27.93■■■□□ 2.06
SYNGAP1-206ENST00000479510 TMCO3Q6UWJ1 677 aa27.93■■■□□ 2.06
SYNGAP1-206ENST00000479510 CNGA4Q8IV77 575 aa27.93■■■□□ 2.06
SYNGAP1-206ENST00000479510 DCP1AQ9NPI6 582 aaPredicted RBP27.93■■■□□ 2.06
SYNGAP1-206ENST00000479510 LRRC10BA6NIK2 292 aa27.92■■■□□ 2.06
SYNGAP1-206ENST00000479510 GTPBP6O43824 516 aaPredicted RBP27.92■■■□□ 2.06
SYNGAP1-206ENST00000479510 ZRANB2O95218 330 aaKnown RBP eCLIP27.92■■■□□ 2.063e-6■■■■■ 27.8
SYNGAP1-206ENST00000479510 GPR161Q8N6U8 529 aaKnown RBP27.92■■■□□ 2.06
SYNGAP1-206ENST00000479510 WDR24Q96S15 920 aa27.92■■■□□ 2.06
SYNGAP1-206ENST00000479510 ANKRD2Q9GZV1 360 aa27.92■■■□□ 2.06
SYNGAP1-206ENST00000479510 SH3GLB2Q9NR46 395 aa27.92■■■□□ 2.06
SYNGAP1-206ENST00000479510 FHOD1Q9Y613 1164 aa27.92■■■□□ 2.06
SYNGAP1-206ENST00000479510 TUBB2AQ13885 445 aa27.91■■■□□ 2.06
SYNGAP1-206ENST00000479510 TERF2Q15554 542 aa27.91■■■□□ 2.06
SYNGAP1-206ENST00000479510 C3orf67Q6ZVT6 689 aa27.91■■■□□ 2.06
SYNGAP1-206ENST00000479510 TUBB2BQ9BVA1 445 aa27.91■■■□□ 2.06
SYNGAP1-206ENST00000479510 RMND1Q9NWS8 449 aa27.91■■■□□ 2.06
SYNGAP1-206ENST00000479510 MAST2Q6P0Q8 1798 aa27.91■■■□□ 2.06
SYNGAP1-206ENST00000479510 NLRP5P59047 1200 aa27.91■■■□□ 2.06
SYNGAP1-206ENST00000479510 MECOMQ03112 1051 aa27.91■■■□□ 2.06
SYNGAP1-206ENST00000479510 PDXDC2PQ6P474 469 aa27.91■■■□□ 2.06
SYNGAP1-206ENST00000479510 LIMA1Q9UHB6 759 aaKnown RBP27.91■■■□□ 2.06
SYNGAP1-206ENST00000479510 RWDD2AQ9UIY3 292 aa27.91■■■□□ 2.06
SYNGAP1-206ENST00000479510 A0A0G2JS52 829 aa27.9■■■□□ 2.06
SYNGAP1-206ENST00000479510 hCG_1642624A0A1W2PR95 340 aa27.9■■■□□ 2.06
SYNGAP1-206ENST00000479510 TEX33O43247 280 aa27.9■■■□□ 2.06
SYNGAP1-206ENST00000479510 MFAP3LO75121 409 aa27.9■■■□□ 2.06
SYNGAP1-206ENST00000479510 BARGINQ6ZT62 677 aa27.9■■■□□ 2.06
SYNGAP1-206ENST00000479510 WNT7AO00755 349 aa27.9■■■□□ 2.06
SYNGAP1-206ENST00000479510 ADAMTS2O95450 1211 aa27.9■■■□□ 2.06
SYNGAP1-206ENST00000479510 LONP1P36776 959 aaKnown RBP27.9■■■□□ 2.06
SYNGAP1-206ENST00000479510 RBL2Q08999 1139 aa27.9■■■□□ 2.06
SYNGAP1-206ENST00000479510 SEMA3FQ13275 785 aa27.9■■■□□ 2.06
SYNGAP1-206ENST00000479510 KLHL10Q6JEL2 608 aa27.9■■■□□ 2.06
SYNGAP1-206ENST00000479510 NYXQ9GZU5 481 aa27.9■■■□□ 2.06
SYNGAP1-206ENST00000479510 ADGRG1Q9Y653 693 aa27.9■■■□□ 2.06
SYNGAP1-206ENST00000479510 XDHP47989 1333 aa27.9■■■□□ 2.06
SYNGAP1-206ENST00000479510 PNMA6AP0CW24 399 aaPredicted RBP27.89■■■□□ 2.06
SYNGAP1-206ENST00000479510 PPP2R3AQ06190 1150 aa27.89■■■□□ 2.06
SYNGAP1-206ENST00000479510 RSRC2Q7L4I2 434 aaKnown RBP27.89■■■□□ 2.06
SYNGAP1-206ENST00000479510 TRIM14Q14142 442 aa27.88■■■□□ 2.05
SYNGAP1-206ENST00000479510 FAM177A1Q8N128 213 aaPredicted RBP27.88■■■□□ 2.05
SYNGAP1-206ENST00000479510 RABGGTAQ92696 567 aa27.88■■■□□ 2.05
SYNGAP1-206ENST00000479510 HIBADHP31937 336 aaKnown RBP27.88■■■□□ 2.05
SYNGAP1-206ENST00000479510 RPS8P62241 208 aaKnown RBP27.88■■■□□ 2.05
SYNGAP1-206ENST00000479510 TUBB4BP68371 445 aa27.88■■■□□ 2.05
SYNGAP1-206ENST00000479510 CCDC178Q5BJE1 867 aa27.88■■■□□ 2.05
SYNGAP1-206ENST00000479510 RASGRP2Q7LDG7 609 aa27.88■■■□□ 2.05
SYNGAP1-206ENST00000479510 ANKRD20A12PQ8NF67 263 aa27.88■■■□□ 2.05
SYNGAP1-206ENST00000479510 ANKS1AQ92625 1134 aa27.88■■■□□ 2.05
SYNGAP1-206ENST00000479510 CELF1Q92879 486 aaKnown RBP27.88■■■□□ 2.05
SYNGAP1-206ENST00000479510 ZHX1Q9UKY1 873 aaPredicted RBP27.88■■■□□ 2.05
SYNGAP1-206ENST00000479510 SPATA31A5Q5VU36 1347 aa27.87■■■□□ 2.05
SYNGAP1-206ENST00000479510 SPATA31A7Q8IWB4 1347 aa27.87■■■□□ 2.05
SYNGAP1-206ENST00000479510 STX17P56962 302 aa27.87■■■□□ 2.05
SYNGAP1-206ENST00000479510 JAKMIP3Q5VZ66 844 aa27.87■■■□□ 2.05
SYNGAP1-206ENST00000479510 PIK3AP1Q6ZUJ8 805 aa27.87■■■□□ 2.05
SYNGAP1-206ENST00000479510 CASZ1Q86V15 1759 aa27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms