RNA–Protein interactions for RNA: ENST00000479348.2

PCIF1-202, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

TSL 1 (best)

Gene PCIF1, Length 1,324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-202ENST00000479348 LOC285556D6RIA3 1793 aa16.46■□□□□ 0.23
PCIF1-202ENST00000479348 HSPA1AP0DMV8 641 aaKnown RBP16.46■□□□□ 0.23
PCIF1-202ENST00000479348 HSPA1BP0DMV9 641 aaKnown RBP16.46■□□□□ 0.23
PCIF1-202ENST00000479348 HSPA4P34932 840 aa16.46■□□□□ 0.23
PCIF1-202ENST00000479348 TAF1CQ15572 869 aaPredicted RBP16.46■□□□□ 0.23
PCIF1-202ENST00000479348 ZYXQ15942 572 aaKnown RBP16.46■□□□□ 0.23
PCIF1-202ENST00000479348 NOM1Q5C9Z4 860 aaKnown RBP16.46■□□□□ 0.23
PCIF1-202ENST00000479348 USP26Q9BXU7 913 aa16.46■□□□□ 0.23
PCIF1-202ENST00000479348 STX8Q9UNK0 236 aa16.46■□□□□ 0.23
PCIF1-202ENST00000479348 TAF6LQ9Y6J9 622 aa16.46■□□□□ 0.23
PCIF1-202ENST00000479348 USP17L15C9J2P7 530 aa16.45■□□□□ 0.22
PCIF1-202ENST00000479348 USP17L13C9JLJ4 530 aa16.45■□□□□ 0.22
PCIF1-202ENST00000479348 USP17L11C9JVI0 530 aa16.45■□□□□ 0.22
PCIF1-202ENST00000479348 USP17L18D6R9N7 530 aa16.45■□□□□ 0.22
PCIF1-202ENST00000479348 USP17L22D6RA61 530 aa16.45■□□□□ 0.22
PCIF1-202ENST00000479348 USP17L17D6RBQ6 530 aa16.45■□□□□ 0.22
PCIF1-202ENST00000479348 USP17L19D6RCP7 530 aa16.45■□□□□ 0.22
PCIF1-202ENST00000479348 USP17L20D6RJB6 530 aa16.45■□□□□ 0.22
PCIF1-202ENST00000479348 NMT2O60551 498 aa16.45■□□□□ 0.22
PCIF1-202ENST00000479348 TOP1P11387 765 aaKnown RBP16.45■□□□□ 0.22
PCIF1-202ENST00000479348 VCAM1P19320 739 aa16.45■□□□□ 0.22
PCIF1-202ENST00000479348 OSBPP22059 807 aa16.45■□□□□ 0.22
PCIF1-202ENST00000479348 MCCP23508 829 aa16.45■□□□□ 0.22
PCIF1-202ENST00000479348 USP17L24Q0WX57 530 aa16.45■□□□□ 0.22
PCIF1-202ENST00000479348 TREML2Q5T2D2 321 aa16.45■□□□□ 0.22
PCIF1-202ENST00000479348 STOX1Q6ZVD7 989 aa16.45■□□□□ 0.22
PCIF1-202ENST00000479348 GMCL1P1Q8NEA9 526 aa16.45■□□□□ 0.22
PCIF1-202ENST00000479348 ANKS1AQ92625 1134 aa16.45■□□□□ 0.22
PCIF1-202ENST00000479348 ZSCAN10Q96SZ4 725 aaPredicted RBP16.45■□□□□ 0.22
PCIF1-202ENST00000479348 PARK7Q99497 189 aaKnown RBP16.45■□□□□ 0.22
PCIF1-202ENST00000479348 UBAC1Q9BSL1 405 aa16.45■□□□□ 0.22
PCIF1-202ENST00000479348 MTA3Q9BTC8 594 aa16.45■□□□□ 0.22
PCIF1-202ENST00000479348 F5H6K3 240 aa16.45■□□□□ 0.22
PCIF1-202ENST00000479348 WDR46O15213 610 aaKnown RBP16.45■□□□□ 0.22
PCIF1-202ENST00000479348 KLRC3Q07444 240 aa16.45■□□□□ 0.22
PCIF1-202ENST00000479348 SART3Q15020 963 aaKnown RBP16.45■□□□□ 0.22
PCIF1-202ENST00000479348 ERICH2A1L162 156 aa16.44■□□□□ 0.22
PCIF1-202ENST00000479348 TLR2O60603 784 aa16.44■□□□□ 0.22
PCIF1-202ENST00000479348 HMGB1P09429 215 aaKnown RBP16.44■□□□□ 0.22
PCIF1-202ENST00000479348 MCM5P33992 734 aa16.44■□□□□ 0.22
PCIF1-202ENST00000479348 CTCFP49711 727 aaPredicted RBP16.44■□□□□ 0.22
PCIF1-202ENST00000479348 IRX3P78415 501 aaPredicted RBP16.44■□□□□ 0.22
PCIF1-202ENST00000479348 CRHR2Q13324 411 aa16.44■□□□□ 0.22
PCIF1-202ENST00000479348 DGKZQ13574 1117 aa16.44■□□□□ 0.22
PCIF1-202ENST00000479348 RCSD1Q6JBY9 416 aa16.44■□□□□ 0.22
PCIF1-202ENST00000479348 CATSPERGQ6ZRH7 1159 aa16.44■□□□□ 0.22
PCIF1-202ENST00000479348 CYB5R4Q7L1T6 521 aa16.44■□□□□ 0.22
PCIF1-202ENST00000479348 MB21D2Q8IYB1 491 aaPredicted RBP16.44■□□□□ 0.22
PCIF1-202ENST00000479348 NKX2-3Q8TAU0 364 aa16.44■□□□□ 0.22
PCIF1-202ENST00000479348 GTF3C2Q8WUA4 911 aaPredicted RBP16.44■□□□□ 0.22
PCIF1-202ENST00000479348 ASCC2Q9H1I8 757 aaPredicted RBP16.44■□□□□ 0.22
PCIF1-202ENST00000479348 RPAP3Q9H6T3 665 aaPredicted RBP16.44■□□□□ 0.22
PCIF1-202ENST00000479348 TNKSO95271 1327 aa16.43■□□□□ 0.22
PCIF1-202ENST00000479348 FOXN1O15353 648 aa16.43■□□□□ 0.22
PCIF1-202ENST00000479348 TBC1D8O95759 1140 aa16.43■□□□□ 0.22
PCIF1-202ENST00000479348 GCLCP48506 637 aaPredicted RBP16.43■□□□□ 0.22
PCIF1-202ENST00000479348 C8orf34Q49A92 452 aa16.43■□□□□ 0.22
PCIF1-202ENST00000479348 KIAA1755Q5JYT7 1200 aa16.43■□□□□ 0.22
PCIF1-202ENST00000479348 RASEFQ8IZ41 740 aa16.43■□□□□ 0.22
PCIF1-202ENST00000479348 LRRC47Q8N1G4 583 aaKnown RBP16.43■□□□□ 0.22
PCIF1-202ENST00000479348 SMCR8Q8TEV9 937 aaPredicted RBP16.43■□□□□ 0.22
PCIF1-202ENST00000479348 GMCL1Q96IK5 515 aa16.43■□□□□ 0.22
PCIF1-202ENST00000479348 NEK1Q96PY6 1258 aa16.43■□□□□ 0.22
PCIF1-202ENST00000479348 TMEM47Q9BQJ4 181 aa16.43■□□□□ 0.22
PCIF1-202ENST00000479348 ZKSCAN3Q9BRR0 538 aa16.43■□□□□ 0.22
PCIF1-202ENST00000479348 MYH4Q9Y623 1939 aa16.42■□□□□ 0.22
PCIF1-202ENST00000479348 MYPNQ86TC9 1320 aa16.42■□□□□ 0.22
PCIF1-202ENST00000479348 WDR19Q8NEZ3 1342 aa16.42■□□□□ 0.22
PCIF1-202ENST00000479348 IFIT3O14879 490 aaKnown RBP16.42■□□□□ 0.22
PCIF1-202ENST00000479348 NDUFB10O96000 172 aa16.42■□□□□ 0.22
PCIF1-202ENST00000479348 COG2Q14746 738 aa16.42■□□□□ 0.22
PCIF1-202ENST00000479348 SEC23AQ15436 765 aa16.42■□□□□ 0.22
PCIF1-202ENST00000479348 SPICE1Q8N0Z3 855 aa16.42■□□□□ 0.22
PCIF1-202ENST00000479348 TMTC2Q8N394 836 aa16.42■□□□□ 0.22
PCIF1-202ENST00000479348 ENAHQ8N8S7 591 aaPredicted RBP16.42■□□□□ 0.22
PCIF1-202ENST00000479348 TMEM87BQ96K49 555 aa16.42■□□□□ 0.22
PCIF1-202ENST00000479348 HOXC10Q9NYD6 342 aa16.42■□□□□ 0.22
PCIF1-202ENST00000479348 SNX14Q9Y5W7 946 aa16.42■□□□□ 0.22
PCIF1-202ENST00000479348 ADGRA2Q96PE1 1338 aa16.41■□□□□ 0.22
PCIF1-202ENST00000479348 GPR25O00155 361 aa16.41■□□□□ 0.22
PCIF1-202ENST00000479348 RAD21O60216 631 aa16.41■□□□□ 0.22
PCIF1-202ENST00000479348 CYP2C8P10632 490 aa16.41■□□□□ 0.22
PCIF1-202ENST00000479348 HSPA8P11142 646 aaKnown RBP16.41■□□□□ 0.22
PCIF1-202ENST00000479348 PSMA5P28066 241 aa16.41■□□□□ 0.22
PCIF1-202ENST00000479348 IFIT1BQ5T764 474 aaKnown RBP16.41■□□□□ 0.22
PCIF1-202ENST00000479348 SLFN13Q68D06 897 aa16.41■□□□□ 0.22
PCIF1-202ENST00000479348 LBX2Q6XYB7 198 aa16.41■□□□□ 0.22
PCIF1-202ENST00000479348 TANGO6Q9C0B7 1094 aa16.41■□□□□ 0.22
PCIF1-202ENST00000479348 KAT14Q9H8E8 782 aa16.41■□□□□ 0.22
PCIF1-202ENST00000479348 PRC1O43663 620 aa16.4■□□□□ 0.22
PCIF1-202ENST00000479348 ANTXR2P58335 489 aa16.4■□□□□ 0.22
PCIF1-202ENST00000479348 ANAPC15P60006 121 aa16.4■□□□□ 0.22
PCIF1-202ENST00000479348 HERVK_113P62684 666 aa16.4■□□□□ 0.22
PCIF1-202ENST00000479348 TMEM67Q5HYA8 995 aa16.4■□□□□ 0.22
PCIF1-202ENST00000479348 FAM83BQ5T0W9 1011 aa16.4■□□□□ 0.22
PCIF1-202ENST00000479348 C17orf99Q6UX52 265 aa16.4■□□□□ 0.22
PCIF1-202ENST00000479348 DHX32Q7L7V1 743 aaKnown RBP16.4■□□□□ 0.22
PCIF1-202ENST00000479348 IGDCC4Q8TDY8 1250 aa16.4■□□□□ 0.22
PCIF1-202ENST00000479348 DCAF4Q8WV16 495 aa16.4■□□□□ 0.22
PCIF1-202ENST00000479348 P2RX7Q99572 595 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms