RNA–Protein interactions for RNA: ENST00000479100.1

COL16A1-211, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 740 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-211ENST00000479100 KIAA1683Q9H0B3 1180 aa17.95■□□□□ 0.46
COL16A1-211ENST00000479100 MTMR4Q9NYA4 1195 aa17.95■□□□□ 0.46
COL16A1-211ENST00000479100 LAMA4Q16363 1823 aa17.95■□□□□ 0.46
COL16A1-211ENST00000479100 PDHXO00330 501 aa17.94■□□□□ 0.46
COL16A1-211ENST00000479100 TNRC18O15417 2968 aaPredicted RBP17.94■□□□□ 0.46
COL16A1-211ENST00000479100 TTLL1O95922 423 aa17.94■□□□□ 0.46
COL16A1-211ENST00000479100 SH3D19Q5HYK7 790 aa17.94■□□□□ 0.46
COL16A1-211ENST00000479100 TREML2Q5T2D2 321 aa17.94■□□□□ 0.46
COL16A1-211ENST00000479100 GPAT2Q6NUI2 795 aa17.94■□□□□ 0.46
COL16A1-211ENST00000479100 ANKRD23Q86SG2 305 aa17.94■□□□□ 0.46
COL16A1-211ENST00000479100 PROCA1Q8NCQ7 364 aaPredicted RBP17.94■□□□□ 0.46
COL16A1-211ENST00000479100 NKX2-3Q8TAU0 364 aa17.94■□□□□ 0.46
COL16A1-211ENST00000479100 ZKSCAN3Q9BRR0 538 aa17.94■□□□□ 0.46
COL16A1-211ENST00000479100 EMILIN3Q9NT22 766 aa17.94■□□□□ 0.46
COL16A1-211ENST00000479100 NYAP2Q9P242 653 aa17.94■□□□□ 0.46
COL16A1-211ENST00000479100 STX8Q9UNK0 236 aa17.94■□□□□ 0.46
COL16A1-211ENST00000479100 PTPN22Q9Y2R2 807 aa17.94■□□□□ 0.46
COL16A1-211ENST00000479100 PLIN4Q96Q06 1357 aa17.93■□□□□ 0.46
COL16A1-211ENST00000479100 TAF1CQ15572 869 aaPredicted RBP17.93■□□□□ 0.46
COL16A1-211ENST00000479100 STOX1Q6ZVD7 989 aa17.93■□□□□ 0.46
COL16A1-211ENST00000479100 ZFYVE28Q9HCC9 887 aa17.93■□□□□ 0.46
COL16A1-211ENST00000479100 ZCCHC17Q9NP64 241 aaKnown RBP17.93■□□□□ 0.46
COL16A1-211ENST00000479100 IL17RBQ9NRM6 502 aa17.93■□□□□ 0.46
COL16A1-211ENST00000479100 ZSWIM5Q9P217 1185 aa17.93■□□□□ 0.46
COL16A1-211ENST00000479100 AGTPBP1Q9UPW5 1226 aa17.93■□□□□ 0.46
COL16A1-211ENST00000479100 TMX2Q9Y320 296 aa17.93■□□□□ 0.46
COL16A1-211ENST00000479100 ZKSCAN1P17029 563 aaPredicted RBP17.92■□□□□ 0.46
COL16A1-211ENST00000479100 PABPC4Q13310 644 aaKnown RBP eCLIP17.92■□□□□ 0.46
COL16A1-211ENST00000479100 PPP4R3BQ5MIZ7 849 aa17.92■□□□□ 0.46
COL16A1-211ENST00000479100 IQCA1Q86XH1 822 aa17.92■□□□□ 0.46
COL16A1-211ENST00000479100 SPICE1Q8N0Z3 855 aa17.92■□□□□ 0.46
COL16A1-211ENST00000479100 LRRC47Q8N1G4 583 aaKnown RBP17.92■□□□□ 0.46
COL16A1-211ENST00000479100 NCOA7Q8NI08 942 aa17.92■□□□□ 0.46
COL16A1-211ENST00000479100 EFCC1Q9HA90 598 aa17.92■□□□□ 0.46
COL16A1-211ENST00000479100 GOPCQ9HD26 462 aa17.92■□□□□ 0.46
COL16A1-211ENST00000479100 NT5C2P49902 561 aa17.91■□□□□ 0.46
COL16A1-211ENST00000479100 CHMP4CQ96CF2 233 aa17.91■□□□□ 0.46
COL16A1-211ENST00000479100 C12orf42Q96LP6 360 aa17.91■□□□□ 0.46
COL16A1-211ENST00000479100 UBAC1Q9BSL1 405 aa17.91■□□□□ 0.46
COL16A1-211ENST00000479100 VCPKMTQ9H867 229 aa17.91■□□□□ 0.46
COL16A1-211ENST00000479100 TCP11L1Q9NUJ3 509 aa17.91■□□□□ 0.46
COL16A1-211ENST00000479100 MTMR7Q9Y216 660 aa17.91■□□□□ 0.46
COL16A1-211ENST00000479100 TLR2O60603 784 aa17.9■□□□□ 0.46
COL16A1-211ENST00000479100 CYP2C8P10632 490 aa17.9■□□□□ 0.46
COL16A1-211ENST00000479100 VCAM1P19320 739 aa17.9■□□□□ 0.46
COL16A1-211ENST00000479100 OSBPP22059 807 aa17.9■□□□□ 0.46
COL16A1-211ENST00000479100 MCCP23508 829 aa17.9■□□□□ 0.46
COL16A1-211ENST00000479100 IRX3P78415 501 aaPredicted RBP17.9■□□□□ 0.46
COL16A1-211ENST00000479100 KIAA1755Q5JYT7 1200 aa17.9■□□□□ 0.46
COL16A1-211ENST00000479100 CYB5R4Q7L1T6 521 aa17.9■□□□□ 0.46
COL16A1-211ENST00000479100 ARMC5Q96C12 935 aa17.9■□□□□ 0.46
COL16A1-211ENST00000479100 USP26Q9BXU7 913 aa17.9■□□□□ 0.46
COL16A1-211ENST00000479100 RPAP3Q9H6T3 665 aaPredicted RBP17.9■□□□□ 0.46
COL16A1-211ENST00000479100 ISY1Q9ULR0 285 aaKnown RBP17.9■□□□□ 0.46
COL16A1-211ENST00000479100 F5H6K3 240 aa17.89■□□□□ 0.45
COL16A1-211ENST00000479100 EIF5BO60841 1220 aaKnown RBP17.89■□□□□ 0.45
COL16A1-211ENST00000479100 HSPA4P34932 840 aa17.89■□□□□ 0.45
COL16A1-211ENST00000479100 KLRC3Q07444 240 aa17.89■□□□□ 0.45
COL16A1-211ENST00000479100 CCDC178Q5BJE1 867 aa17.89■□□□□ 0.45
COL16A1-211ENST00000479100 SAMD1Q6SPF0 538 aaPredicted RBP17.89■□□□□ 0.45
COL16A1-211ENST00000479100 CHST3Q7LGC8 479 aa17.89■□□□□ 0.45
COL16A1-211ENST00000479100 RASEFQ8IZ41 740 aa17.89■□□□□ 0.45
COL16A1-211ENST00000479100 MKL1Q969V6 931 aa17.89■□□□□ 0.45
COL16A1-211ENST00000479100 ZSCAN10Q96SZ4 725 aaPredicted RBP17.89■□□□□ 0.45
COL16A1-211ENST00000479100 PARK7Q99497 189 aaKnown RBP17.89■□□□□ 0.45
COL16A1-211ENST00000479100 TANGO6Q9C0B7 1094 aa17.89■□□□□ 0.45
COL16A1-211ENST00000479100 PNMA3Q9UL41 463 aa17.89■□□□□ 0.45
COL16A1-211ENST00000479100 PTPRFP10586 1907 aa17.89■□□□□ 0.45
COL16A1-211ENST00000479100 GREB1LQ9C091 1923 aaPredicted RBP17.89■□□□□ 0.45
COL16A1-211ENST00000479100 PDE4DIPQ5VU43 2346 aa17.88■□□□□ 0.45
COL16A1-211ENST00000479100 USP17L15C9J2P7 530 aa17.88■□□□□ 0.45
COL16A1-211ENST00000479100 USP17L13C9JLJ4 530 aa17.88■□□□□ 0.45
COL16A1-211ENST00000479100 USP17L11C9JVI0 530 aa17.88■□□□□ 0.45
COL16A1-211ENST00000479100 USP17L18D6R9N7 530 aa17.88■□□□□ 0.45
COL16A1-211ENST00000479100 USP17L22D6RA61 530 aa17.88■□□□□ 0.45
COL16A1-211ENST00000479100 USP17L17D6RBQ6 530 aa17.88■□□□□ 0.45
COL16A1-211ENST00000479100 USP17L19D6RCP7 530 aa17.88■□□□□ 0.45
COL16A1-211ENST00000479100 USP17L20D6RJB6 530 aa17.88■□□□□ 0.45
COL16A1-211ENST00000479100 USP17L24Q0WX57 530 aa17.88■□□□□ 0.45
COL16A1-211ENST00000479100 SLFN13Q68D06 897 aa17.88■□□□□ 0.45
COL16A1-211ENST00000479100 SMCR8Q8TEV9 937 aaPredicted RBP17.88■□□□□ 0.45
COL16A1-211ENST00000479100 LPAR1Q92633 364 aa17.88■□□□□ 0.45
COL16A1-211ENST00000479100 TMEM47Q9BQJ4 181 aa17.88■□□□□ 0.45
COL16A1-211ENST00000479100 ASCC2Q9H1I8 757 aaPredicted RBP17.88■□□□□ 0.45
COL16A1-211ENST00000479100 SLC45A1Q9Y2W3 748 aa17.88■□□□□ 0.45
COL16A1-211ENST00000479100 ERICH2A1L162 156 aa17.87■□□□□ 0.45
COL16A1-211ENST00000479100 IFIT3O14879 490 aaKnown RBP17.87■□□□□ 0.45
COL16A1-211ENST00000479100 EPB41L2O43491 1005 aaKnown RBP17.87■□□□□ 0.45
COL16A1-211ENST00000479100 SEC24BO95487 1268 aa17.87■□□□□ 0.45
COL16A1-211ENST00000479100 NDUFB10O96000 172 aa17.87■□□□□ 0.45
COL16A1-211ENST00000479100 TOP1P11387 765 aaKnown RBP17.87■□□□□ 0.45
COL16A1-211ENST00000479100 HOXA7P31268 230 aaPredicted RBP17.87■□□□□ 0.45
COL16A1-211ENST00000479100 KRT32Q14532 448 aa17.87■□□□□ 0.45
COL16A1-211ENST00000479100 C8orf34Q49A92 452 aa17.87■□□□□ 0.45
COL16A1-211ENST00000479100 FAM83BQ5T0W9 1011 aa17.87■□□□□ 0.45
COL16A1-211ENST00000479100 C17orf99Q6UX52 265 aa17.87■□□□□ 0.45
COL16A1-211ENST00000479100 MB21D2Q8IYB1 491 aaPredicted RBP17.87■□□□□ 0.45
COL16A1-211ENST00000479100 ENAHQ8N8S7 591 aaPredicted RBP17.87■□□□□ 0.45
COL16A1-211ENST00000479100 TTC14Q96N46 770 aa17.87■□□□□ 0.45
COL16A1-211ENST00000479100 NUP88Q99567 741 aaPredicted RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 265.4 ms