RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 CCDC69A6NI79 296 aa15.34■□□□□ 0.05
CHD3-210ENST00000479080 DDAH1O94760 285 aa15.34■□□□□ 0.05
CHD3-210ENST00000479080 NF2P35240 595 aa15.34■□□□□ 0.05
CHD3-210ENST00000479080 CCT2P78371 535 aaKnown RBP15.34■□□□□ 0.05
CHD3-210ENST00000479080 ATP2B2Q01814 1243 aa15.34■□□□□ 0.05
CHD3-210ENST00000479080 FUT2Q10981 343 aa15.34■□□□□ 0.05
CHD3-210ENST00000479080 GRM4Q14833 912 aa15.34■□□□□ 0.05
CHD3-210ENST00000479080 NFXL1Q6ZNB6 911 aa15.34■□□□□ 0.05
CHD3-210ENST00000479080 RBM46Q8TBY0 533 aaKnown RBP15.34■□□□□ 0.05
CHD3-210ENST00000479080 CHMP4CQ96CF2 233 aa15.34■□□□□ 0.05
CHD3-210ENST00000479080 WDR18Q9BV38 432 aa15.34■□□□□ 0.05
CHD3-210ENST00000479080 KAT14Q9H8E8 782 aa15.34■□□□□ 0.05
CHD3-210ENST00000479080 ELP3Q9H9T3 547 aa15.34■□□□□ 0.05
CHD3-210ENST00000479080 SLC12A7Q9Y666 1083 aa15.34■□□□□ 0.05
CHD3-210ENST00000479080 TRPM7Q96QT4 1865 aa15.33■□□□□ 0.05
CHD3-210ENST00000479080 MYH4Q9Y623 1939 aa15.33■□□□□ 0.05
CHD3-210ENST00000479080 GOLGA8AA7E2F4 631 aa15.33■□□□□ 0.04
CHD3-210ENST00000479080 USP17L5A8MUK1 530 aa15.33■□□□□ 0.04
CHD3-210ENST00000479080 ZBTB43O43298 467 aa15.33■□□□□ 0.04
CHD3-210ENST00000479080 PLEKHA8P1O95397 391 aa15.33■□□□□ 0.04
CHD3-210ENST00000479080 NDUFB10O96000 172 aa15.33■□□□□ 0.04
CHD3-210ENST00000479080 PDHBP11177 359 aa15.33■□□□□ 0.04
CHD3-210ENST00000479080 ADD1P35611 737 aaKnown RBP15.33■□□□□ 0.04
CHD3-210ENST00000479080 RCAN1P53805 252 aa15.33■□□□□ 0.04
CHD3-210ENST00000479080 NTRK3Q16288 839 aa15.33■□□□□ 0.04
CHD3-210ENST00000479080 ARMC9Q7Z3E5 817 aa15.33■□□□□ 0.04
CHD3-210ENST00000479080 NBPF11Q86T75 865 aa15.33■□□□□ 0.04
CHD3-210ENST00000479080 ANKRD13AQ8IZ07 590 aa15.33■□□□□ 0.04
CHD3-210ENST00000479080 TMTC2Q8N394 836 aa15.33■□□□□ 0.04
CHD3-210ENST00000479080 STAG2Q8N3U4 1231 aa15.33■□□□□ 0.04
CHD3-210ENST00000479080 SMC1BQ8NDV3 1235 aa15.33■□□□□ 0.04
CHD3-210ENST00000479080 ZSCAN31Q96LW9 406 aaPredicted RBP15.33■□□□□ 0.04
CHD3-210ENST00000479080 SH2B1Q9NRF2 756 aaPredicted RBP15.33■□□□□ 0.04
CHD3-210ENST00000479080 MAD2L2Q9UI95 211 aa15.33■□□□□ 0.04
CHD3-210ENST00000479080 SPDYE5A6NIY4 337 aa15.32■□□□□ 0.04
CHD3-210ENST00000479080 JAK2O60674 1132 aa15.32■□□□□ 0.04
CHD3-210ENST00000479080 TOMM70O94826 608 aa15.32■□□□□ 0.04
CHD3-210ENST00000479080 METAP2P50579 478 aaKnown RBP eCLIP15.32■□□□□ 0.04
CHD3-210ENST00000479080 TTLL12Q14166 644 aaPredicted RBP15.32■□□□□ 0.04
CHD3-210ENST00000479080 USP17L2Q6R6M4 530 aa15.32■□□□□ 0.04
CHD3-210ENST00000479080 GMCL1P1Q8NEA9 526 aa15.32■□□□□ 0.04
CHD3-210ENST00000479080 NUP133Q8WUM0 1156 aa15.32■□□□□ 0.04
CHD3-210ENST00000479080 NUP88Q99567 741 aaPredicted RBP15.32■□□□□ 0.04
CHD3-210ENST00000479080 SLKQ9H2G2 1235 aaPredicted RBP15.32■□□□□ 0.04
CHD3-210ENST00000479080 CPVLQ9H3G5 476 aa15.32■□□□□ 0.04
CHD3-210ENST00000479080 VCPKMTQ9H867 229 aa15.32■□□□□ 0.04
CHD3-210ENST00000479080 MTMR7Q9Y216 660 aa15.32■□□□□ 0.04
CHD3-210ENST00000479080 AFG3L2Q9Y4W6 797 aa15.32■□□□□ 0.04
CHD3-210ENST00000479080 PALM3A6NDB9 673 aaPredicted RBP15.31■□□□□ 0.04
CHD3-210ENST00000479080 F5H6K3 240 aa15.31■□□□□ 0.04
CHD3-210ENST00000479080 PPFIA3O75145 1194 aa15.31■□□□□ 0.04
CHD3-210ENST00000479080 GOLGA8HP0CJ92 632 aa15.31■□□□□ 0.04
CHD3-210ENST00000479080 FKBP1BP68106 108 aa15.31■□□□□ 0.04
CHD3-210ENST00000479080 KLRC3Q07444 240 aa15.31■□□□□ 0.04
CHD3-210ENST00000479080 SPP2Q13103 211 aa15.31■□□□□ 0.04
CHD3-210ENST00000479080 MOGSQ13724 837 aa15.31■□□□□ 0.04
CHD3-210ENST00000479080 ZYXQ15942 572 aaKnown RBP15.31■□□□□ 0.04
CHD3-210ENST00000479080 TMTC3Q6ZXV5 915 aa15.31■□□□□ 0.04
CHD3-210ENST00000479080 CATIPQ7Z7H3 387 aa15.31■□□□□ 0.04
CHD3-210ENST00000479080 CMTR1Q8N1G2 835 aaKnown RBP15.31■□□□□ 0.04
CHD3-210ENST00000479080 FANCBQ8NB91 859 aa15.31■□□□□ 0.04
CHD3-210ENST00000479080 NSUN7Q8NE18 718 aaKnown RBP15.31■□□□□ 0.04
CHD3-210ENST00000479080 SMARCC2Q8TAQ2 1214 aa15.31■□□□□ 0.04
CHD3-210ENST00000479080 KIAA1683Q9H0B3 1180 aa15.31■□□□□ 0.04
CHD3-210ENST00000479080 PICK1Q9NRD5 415 aa15.31■□□□□ 0.04
CHD3-210ENST00000479080 EMILIN3Q9NT22 766 aa15.31■□□□□ 0.04
CHD3-210ENST00000479080 FOXD4L1Q9NU39 408 aa15.31■□□□□ 0.04
CHD3-210ENST00000479080 NAP1L2Q9ULW6 460 aaPredicted RBP15.31■□□□□ 0.04
CHD3-210ENST00000479080 SYNPO2Q9UMS6 1093 aa15.31■□□□□ 0.04
CHD3-210ENST00000479080 CSADQ9Y600 493 aa15.31■□□□□ 0.04
CHD3-210ENST00000479080 ZHX2Q9Y6X8 837 aa15.31■□□□□ 0.04
CHD3-210ENST00000479080 TRIM75PA6NK02 468 aa15.3■□□□□ 0.04
CHD3-210ENST00000479080 FDPSP14324 419 aaKnown RBP15.3■□□□□ 0.04
CHD3-210ENST00000479080 ZNF543Q08ER8 600 aa15.3■□□□□ 0.04
CHD3-210ENST00000479080 MTMR2Q13614 643 aa15.3■□□□□ 0.04
CHD3-210ENST00000479080 RTN1Q16799 776 aa15.3■□□□□ 0.04
CHD3-210ENST00000479080 PPP4R3BQ5MIZ7 849 aa15.3■□□□□ 0.04
CHD3-210ENST00000479080 SLFN13Q68D06 897 aa15.3■□□□□ 0.04
CHD3-210ENST00000479080 FRMPD2Q68DX3 1309 aaPredicted RBP15.3■□□□□ 0.04
CHD3-210ENST00000479080 TTBK2Q6IQ55 1244 aa15.3■□□□□ 0.04
CHD3-210ENST00000479080 SRBD1Q8N5C6 995 aaKnown RBP15.3■□□□□ 0.04
CHD3-210ENST00000479080 ZNF280CQ8ND82 737 aa15.3■□□□□ 0.04
CHD3-210ENST00000479080 CNTNAP5Q8WYK1 1306 aa15.3■□□□□ 0.04
CHD3-210ENST00000479080 GMCL1Q96IK5 515 aa15.3■□□□□ 0.04
CHD3-210ENST00000479080 MAP3K14Q99558 947 aa15.3■□□□□ 0.04
CHD3-210ENST00000479080 ARHGEF10LQ9HCE6 1279 aa15.3■□□□□ 0.04
CHD3-210ENST00000479080 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.3■□□□□ 0.04
CHD3-210ENST00000479080 KCNH4Q9UQ05 1017 aa15.3■□□□□ 0.04
CHD3-210ENST00000479080 LOC285556D6RIA3 1793 aa15.29■□□□□ 0.04
CHD3-210ENST00000479080 IRF6O14896 467 aa15.29■□□□□ 0.04
CHD3-210ENST00000479080 CYTH3O43739 400 aa15.29■□□□□ 0.04
CHD3-210ENST00000479080 PPATQ06203 517 aa15.29■□□□□ 0.04
CHD3-210ENST00000479080 SH3D19Q5HYK7 790 aa15.29■□□□□ 0.04
CHD3-210ENST00000479080 ERO1BQ86YB8 467 aa15.29■□□□□ 0.04
CHD3-210ENST00000479080 SPICE1Q8N0Z3 855 aa15.29■□□□□ 0.04
CHD3-210ENST00000479080 SPRYD3Q8NCJ5 442 aa15.29■□□□□ 0.04
CHD3-210ENST00000479080 OPTNQ96CV9 577 aa15.29■□□□□ 0.04
CHD3-210ENST00000479080 SHISA4Q96DD7 197 aa15.29■□□□□ 0.04
CHD3-210ENST00000479080 OTUD5Q96G74 571 aa15.29■□□□□ 0.04
CHD3-210ENST00000479080 C12orf42Q96LP6 360 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms