RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 FEZ1Q99689 392 aa31.66■■■□□ 2.66
CCM2-211ENST00000478582 EMILIN3Q9NT22 766 aa31.66■■■□□ 2.66
CCM2-211ENST00000478582 MTMR4Q9NYA4 1195 aa31.66■■■□□ 2.66
CCM2-211ENST00000478582 TMOD4Q9NZQ9 345 aa31.66■■■□□ 2.66
CCM2-211ENST00000478582 RRP12Q5JTH9 1297 aaKnown RBP31.65■■■□□ 2.66
CCM2-211ENST00000478582 ESR2Q92731 530 aa31.65■■■□□ 2.66
CCM2-211ENST00000478582 CEP95Q96GE4 821 aa31.65■■■□□ 2.66
CCM2-211ENST00000478582 SH2D4AQ9H788 454 aa31.65■■■□□ 2.66
CCM2-211ENST00000478582 CNNM2Q9H8M5 875 aa31.65■■■□□ 2.66
CCM2-211ENST00000478582 TCP11L1Q9NUJ3 509 aa31.65■■■□□ 2.66
CCM2-211ENST00000478582 NEDD4P46934 1319 aa31.65■■■□□ 2.66
CCM2-211ENST00000478582 LOC285556D6RIA3 1793 aa31.64■■■□□ 2.66
CCM2-211ENST00000478582 PPP4R3BQ5MIZ7 849 aa31.64■■■□□ 2.66
CCM2-211ENST00000478582 MKL1Q969V6 931 aa31.64■■■□□ 2.66
CCM2-211ENST00000478582 KRT23Q9C075 422 aa31.64■■■□□ 2.66
CCM2-211ENST00000478582 ARHGAP39Q9C0H5 1083 aa31.64■■■□□ 2.66
CCM2-211ENST00000478582 IL17RBQ9NRM6 502 aa31.64■■■□□ 2.66
CCM2-211ENST00000478582 EPB41L2O43491 1005 aaKnown RBP31.63■■■□□ 2.65
CCM2-211ENST00000478582 REC8O95072 547 aa31.63■■■□□ 2.65
CCM2-211ENST00000478582 GNRH1P01148 92 aa31.63■■■□□ 2.65
CCM2-211ENST00000478582 BCRP11274 1271 aa31.63■■■□□ 2.65
CCM2-211ENST00000478582 NOVP48745 357 aa31.63■■■□□ 2.65
CCM2-211ENST00000478582 TREML2Q5T2D2 321 aa31.63■■■□□ 2.65
CCM2-211ENST00000478582 SYNPO2Q9UMS6 1093 aa31.63■■■□□ 2.65
CCM2-211ENST00000478582 TTLL1O95922 423 aa31.62■■■□□ 2.65
CCM2-211ENST00000478582 SLC27A2O14975 620 aa31.61■■■□□ 2.65
CCM2-211ENST00000478582 SOX10P56693 466 aa31.61■■■□□ 2.65
CCM2-211ENST00000478582 CREB3L3Q68CJ9 461 aa31.61■■■□□ 2.65
CCM2-211ENST00000478582 NKX2-3Q8TAU0 364 aa31.61■■■□□ 2.65
CCM2-211ENST00000478582 CLIP2Q9UDT6 1046 aa31.61■■■□□ 2.65
CCM2-211ENST00000478582 PNMA3Q9UL41 463 aa31.61■■■□□ 2.65
CCM2-211ENST00000478582 E7EWF7 191 aa31.6■■■□□ 2.65
CCM2-211ENST00000478582 HOXA7P31268 230 aaPredicted RBP31.6■■■□□ 2.65
CCM2-211ENST00000478582 ATP2B2Q01814 1243 aa31.6■■■□□ 2.65
CCM2-211ENST00000478582 PABPC4Q13310 644 aaKnown RBP eCLIP31.6■■■□□ 2.65
CCM2-211ENST00000478582 ZYXQ15942 572 aaKnown RBP31.6■■■□□ 2.65
CCM2-211ENST00000478582 SMCR8Q8TEV9 937 aaPredicted RBP31.6■■■□□ 2.65
CCM2-211ENST00000478582 VCPKMTQ9H867 229 aa31.6■■■□□ 2.65
CCM2-211ENST00000478582 TAF6LQ9Y6J9 622 aa31.6■■■□□ 2.65
CCM2-211ENST00000478582 ZSWIM8A7E2V4 1837 aa31.59■■■□□ 2.65
CCM2-211ENST00000478582 B4E1Z4 1266 aa31.59■■■□□ 2.65
CCM2-211ENST00000478582 KDM4AO75164 1064 aa31.59■■■□□ 2.65
CCM2-211ENST00000478582 PSMC4P43686 418 aa31.59■■■□□ 2.65
CCM2-211ENST00000478582 LPAR1Q92633 364 aa31.59■■■□□ 2.65
CCM2-211ENST00000478582 CTGFP29279 349 aa31.58■■■□□ 2.65
CCM2-211ENST00000478582 PRMT2P55345 433 aa31.58■■■□□ 2.65
CCM2-211ENST00000478582 TRDNQ13061 729 aa31.58■■■□□ 2.65
CCM2-211ENST00000478582 RNF20Q5VTR2 975 aa31.58■■■□□ 2.65
CCM2-211ENST00000478582 ZSWIM5Q9P217 1185 aa31.58■■■□□ 2.65
CCM2-211ENST00000478582 NMT2O60551 498 aa31.57■■■□□ 2.64
CCM2-211ENST00000478582 VCAM1P19320 739 aa31.57■■■□□ 2.64
CCM2-211ENST00000478582 OSBPP22059 807 aa31.57■■■□□ 2.64
CCM2-211ENST00000478582 MLLT1Q03111 559 aaPredicted RBP31.57■■■□□ 2.64
CCM2-211ENST00000478582 CCDC178Q5BJE1 867 aa31.57■■■□□ 2.64
CCM2-211ENST00000478582 STOX1Q6ZVD7 989 aa31.57■■■□□ 2.64
CCM2-211ENST00000478582 TRIM47Q96LD4 638 aa31.57■■■□□ 2.64
CCM2-211ENST00000478582 TTC14Q96N46 770 aa31.57■■■□□ 2.64
CCM2-211ENST00000478582 GOPCQ9HD26 462 aa31.57■■■□□ 2.64
CCM2-211ENST00000478582 PTCH2Q9Y6C5 1203 aa31.57■■■□□ 2.64
CCM2-211ENST00000478582 ECM2O94769 699 aaPredicted RBP31.56■■■□□ 2.64
CCM2-211ENST00000478582 FMNL1O95466 1100 aaPredicted RBP31.56■■■□□ 2.64
CCM2-211ENST00000478582 HOXD10P28358 340 aa31.56■■■□□ 2.64
CCM2-211ENST00000478582 TSGA10IPQ3SY00 556 aa31.56■■■□□ 2.64
CCM2-211ENST00000478582 KIAA1755Q5JYT7 1200 aa31.56■■■□□ 2.64
CCM2-211ENST00000478582 NCOA7Q8NI08 942 aa31.56■■■□□ 2.64
CCM2-211ENST00000478582 ARMC5Q96C12 935 aa31.56■■■□□ 2.64
CCM2-211ENST00000478582 IQCA1Q86XH1 822 aa31.55■■■□□ 2.64
CCM2-211ENST00000478582 KCNB2Q92953 911 aa31.55■■■□□ 2.64
CCM2-211ENST00000478582 ASCC2Q9H1I8 757 aaPredicted RBP31.55■■■□□ 2.64
CCM2-211ENST00000478582 STX8Q9UNK0 236 aa31.55■■■□□ 2.64
CCM2-211ENST00000478582 USP17L15C9J2P7 530 aa31.54■■■□□ 2.64
CCM2-211ENST00000478582 USP17L13C9JLJ4 530 aa31.54■■■□□ 2.64
CCM2-211ENST00000478582 USP17L11C9JVI0 530 aa31.54■■■□□ 2.64
CCM2-211ENST00000478582 USP17L18D6R9N7 530 aa31.54■■■□□ 2.64
CCM2-211ENST00000478582 USP17L22D6RA61 530 aa31.54■■■□□ 2.64
CCM2-211ENST00000478582 USP17L17D6RBQ6 530 aa31.54■■■□□ 2.64
CCM2-211ENST00000478582 USP17L19D6RCP7 530 aa31.54■■■□□ 2.64
CCM2-211ENST00000478582 USP17L20D6RJB6 530 aa31.54■■■□□ 2.64
CCM2-211ENST00000478582 EIF5BO60841 1220 aaKnown RBP31.54■■■□□ 2.64
CCM2-211ENST00000478582 USP17L24Q0WX57 530 aa31.54■■■□□ 2.64
CCM2-211ENST00000478582 GMCL1P1Q8NEA9 526 aa31.54■■■□□ 2.64
CCM2-211ENST00000478582 SRRDQ9UH36 339 aa31.54■■■□□ 2.64
CCM2-211ENST00000478582 F5H6K3 240 aa31.53■■■□□ 2.64
CCM2-211ENST00000478582 HSPA4P34932 840 aa31.53■■■□□ 2.64
CCM2-211ENST00000478582 GCLCP48506 637 aaPredicted RBP31.53■■■□□ 2.64
CCM2-211ENST00000478582 FCGRTP55899 365 aa31.53■■■□□ 2.64
CCM2-211ENST00000478582 KLRC3Q07444 240 aa31.53■■■□□ 2.64
CCM2-211ENST00000478582 RCSD1Q6JBY9 416 aa31.53■■■□□ 2.64
CCM2-211ENST00000478582 CATSPERGQ6ZRH7 1159 aa31.53■■■□□ 2.64
CCM2-211ENST00000478582 RALYLQ86SE5 291 aaKnown RBP31.53■■■□□ 2.64
CCM2-211ENST00000478582 DGKHQ86XP1 1220 aa31.53■■■□□ 2.64
CCM2-211ENST00000478582 ANKS1AQ92625 1134 aa31.53■■■□□ 2.64
CCM2-211ENST00000478582 USP26Q9BXU7 913 aa31.53■■■□□ 2.64
CCM2-211ENST00000478582 WDR46O15213 610 aaKnown RBP31.52■■■□□ 2.64
CCM2-211ENST00000478582 NBPF11Q86T75 865 aa31.52■■■□□ 2.64
CCM2-211ENST00000478582 ANKRD13CQ8N6S4 541 aa31.52■■■□□ 2.64
CCM2-211ENST00000478582 ZSCAN10Q96SZ4 725 aaPredicted RBP31.52■■■□□ 2.64
CCM2-211ENST00000478582 RPAP3Q9H6T3 665 aaPredicted RBP31.52■■■□□ 2.64
CCM2-211ENST00000478582 MGAMO43451 1857 aa31.51■■■□□ 2.63
CCM2-211ENST00000478582 FAM110CQ1W6H9 321 aa31.51■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms