RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 KRBA2Q6ZNG9 492 aa15.88■□□□□ 0.13
NPHP4-208ENST00000478423 NEK8Q86SG6 692 aa15.88■□□□□ 0.13
NPHP4-208ENST00000478423 BSDC1Q9NW68 430 aaPredicted RBP15.88■□□□□ 0.13
NPHP4-208ENST00000478423 PCDHA12Q9UN75 941 aa15.88■□□□□ 0.13
NPHP4-208ENST00000478423 ARHGAP6O43182 974 aa15.88■□□□□ 0.13
NPHP4-208ENST00000478423 CYP19A1P11511 503 aaPredicted RBP15.88■□□□□ 0.13
NPHP4-208ENST00000478423 PRPHP41219 470 aa15.88■□□□□ 0.13
NPHP4-208ENST00000478423 SMTNP53814 917 aa15.88■□□□□ 0.13
NPHP4-208ENST00000478423 KRT222Q8N1A0 295 aa15.88■□□□□ 0.13
NPHP4-208ENST00000478423 STRBPQ96SI9 672 aaKnown RBP15.88■□□□□ 0.13
NPHP4-208ENST00000478423 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.88■□□□□ 0.13
NPHP4-208ENST00000478423 ZBED4O75132 1171 aa15.88■□□□□ 0.13
NPHP4-208ENST00000478423 PCDHA5Q9Y5H7 936 aa15.88■□□□□ 0.13
NPHP4-208ENST00000478423 GCOM1H8Y6P7 765 aaPredicted RBP15.87■□□□□ 0.13
NPHP4-208ENST00000478423 RHOXF2BP0C7M4 288 aa15.87■□□□□ 0.13
NPHP4-208ENST00000478423 MYZAPP0CAP1 466 aa15.87■□□□□ 0.13
NPHP4-208ENST00000478423 IFNAR1P17181 557 aa15.87■□□□□ 0.13
NPHP4-208ENST00000478423 BIRC3Q13489 604 aa15.87■□□□□ 0.13
NPHP4-208ENST00000478423 TNFAIP1Q13829 316 aa15.87■□□□□ 0.13
NPHP4-208ENST00000478423 RHOXF2Q9BQY4 288 aa15.87■□□□□ 0.13
NPHP4-208ENST00000478423 DBNDD1Q9H9R9 158 aa15.87■□□□□ 0.13
NPHP4-208ENST00000478423 A0A1W2PQ27 194 aa15.87■□□□□ 0.13
NPHP4-208ENST00000478423 A0A1W2PQ64 194 aa15.87■□□□□ 0.13
NPHP4-208ENST00000478423 A0A1W2PQD8 194 aa15.87■□□□□ 0.13
NPHP4-208ENST00000478423 SLFN13Q68D06 897 aa15.87■□□□□ 0.13
NPHP4-208ENST00000478423 GPIHBP1Q8IV16 184 aa15.87■□□□□ 0.13
NPHP4-208ENST00000478423 HOOK2Q96ED9 719 aa15.87■□□□□ 0.13
NPHP4-208ENST00000478423 ISCA1Q9BUE6 129 aa15.87■□□□□ 0.13
NPHP4-208ENST00000478423 ZNF408Q9H9D4 720 aa15.87■□□□□ 0.13
NPHP4-208ENST00000478423 INO80Q9ULG1 1556 aaPredicted RBP15.87■□□□□ 0.13
NPHP4-208ENST00000478423 CAMSAP1Q5T5Y3 1602 aa15.87■□□□□ 0.13
NPHP4-208ENST00000478423 H7C1D1 291 aa15.87■□□□□ 0.13
NPHP4-208ENST00000478423 GTF2F1P35269 517 aaKnown RBP eCLIP15.87■□□□□ 0.132e-6■■■■■ 27.9
NPHP4-208ENST00000478423 GJC1P36383 396 aa15.87■□□□□ 0.13
NPHP4-208ENST00000478423 SPECC1LQ69YQ0 1117 aa15.87■□□□□ 0.13
NPHP4-208ENST00000478423 NT5C3AQ9H0P0 336 aa15.87■□□□□ 0.13
NPHP4-208ENST00000478423 TMEM110-MUSTN1A8MSY1 372 aa15.86■□□□□ 0.13
NPHP4-208ENST00000478423 SH2B2O14492 632 aaPredicted RBP15.86■□□□□ 0.13
NPHP4-208ENST00000478423 OR52Z1P0C646 297 aa15.86■□□□□ 0.13
NPHP4-208ENST00000478423 USP17L8P0C7I0 530 aa15.86■□□□□ 0.13
NPHP4-208ENST00000478423 SERPINB13Q9UIV8 391 aa15.86■□□□□ 0.13
NPHP4-208ENST00000478423 CYP2E1P05181 493 aaPredicted RBP15.86■□□□□ 0.13
NPHP4-208ENST00000478423 LMAN1P49257 510 aa15.86■□□□□ 0.13
NPHP4-208ENST00000478423 NR5A1Q13285 461 aa15.86■□□□□ 0.13
NPHP4-208ENST00000478423 CYP26C1Q6V0L0 522 aa15.86■□□□□ 0.13
NPHP4-208ENST00000478423 MYCT1Q8N699 235 aa15.86■□□□□ 0.13
NPHP4-208ENST00000478423 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.86■□□□□ 0.13
NPHP4-208ENST00000478423 ZBTB9Q96C00 473 aa15.86■□□□□ 0.13
NPHP4-208ENST00000478423 AIFM3Q96NN9 605 aa15.86■□□□□ 0.13
NPHP4-208ENST00000478423 FNBP1Q96RU3 617 aa15.86■□□□□ 0.13
NPHP4-208ENST00000478423 C1orf167Q5SNV9 1468 aa15.86■□□□□ 0.13
NPHP4-208ENST00000478423 KIF23Q02241 960 aaPredicted RBP15.86■□□□□ 0.13
NPHP4-208ENST00000478423 DPH6Q7L8W6 267 aa15.86■□□□□ 0.13
NPHP4-208ENST00000478423 TMC4Q7Z404 712 aa15.86■□□□□ 0.13
NPHP4-208ENST00000478423 CCDC17Q96LX7 622 aa15.86■□□□□ 0.13
NPHP4-208ENST00000478423 RCOR1Q9UKL0 485 aa15.86■□□□□ 0.13
NPHP4-208ENST00000478423 PCDHA1Q9Y5I3 950 aa15.86■□□□□ 0.13
NPHP4-208ENST00000478423 EEF2P13639 858 aaKnown RBP15.86■□□□□ 0.13
NPHP4-208ENST00000478423 EZRP15311 586 aaKnown RBP15.86■□□□□ 0.13
NPHP4-208ENST00000478423 LIFRP42702 1097 aa15.86■□□□□ 0.13
NPHP4-208ENST00000478423 PRR16Q569H4 304 aa15.86■□□□□ 0.13
NPHP4-208ENST00000478423 GALNT17Q6IS24 598 aa15.86■□□□□ 0.13
NPHP4-208ENST00000478423 CCDC84Q86UT8 332 aaPredicted RBP15.86■□□□□ 0.13
NPHP4-208ENST00000478423 TMTC1Q8IUR5 882 aa15.86■□□□□ 0.13
NPHP4-208ENST00000478423 FOXP1Q9H334 677 aaPredicted RBP15.86■□□□□ 0.13
NPHP4-208ENST00000478423 POLR3EQ9NVU0 708 aa15.86■□□□□ 0.13
NPHP4-208ENST00000478423 CRB1P82279 1406 aa15.85■□□□□ 0.13
NPHP4-208ENST00000478423 RBM6P78332 1123 aaKnown RBP15.85■□□□□ 0.13
NPHP4-208ENST00000478423 MAP2K1Q02750 393 aaPredicted RBP15.85■□□□□ 0.13
NPHP4-208ENST00000478423 MECOMQ03112 1051 aa15.85■□□□□ 0.13
NPHP4-208ENST00000478423 NCBP1Q09161 790 aaKnown RBP15.85■□□□□ 0.13
NPHP4-208ENST00000478423 GRAPQ13588 217 aa15.85■□□□□ 0.13
NPHP4-208ENST00000478423 TPH2Q8IWU9 490 aa15.85■□□□□ 0.13
NPHP4-208ENST00000478423 GRAPLQ8TC17 118 aaPredicted RBP15.85■□□□□ 0.13
NPHP4-208ENST00000478423 RASGRP4Q8TDF6 673 aa15.85■□□□□ 0.13
NPHP4-208ENST00000478423 VTI1AQ96AJ9 217 aa15.85■□□□□ 0.13
NPHP4-208ENST00000478423 SOS2Q07890 1332 aaPredicted RBP15.85■□□□□ 0.13
NPHP4-208ENST00000478423 NEXMIFQ5QGS0 1516 aa15.85■□□□□ 0.13
NPHP4-208ENST00000478423 GAS7O60861 476 aa15.85■□□□□ 0.13
NPHP4-208ENST00000478423 FANCLQ9NW38 375 aa15.85■□□□□ 0.13
NPHP4-208ENST00000478423 ADAMTS13Q76LX8 1427 aa15.85■□□□□ 0.13
NPHP4-208ENST00000478423 KCNQ2O43526 872 aa15.85■□□□□ 0.13
NPHP4-208ENST00000478423 GCNT3O95395 438 aa15.85■□□□□ 0.13
NPHP4-208ENST00000478423 FMNL1O95466 1100 aaPredicted RBP15.85■□□□□ 0.13
NPHP4-208ENST00000478423 TRIM28Q13263 835 aaKnown RBP15.85■□□□□ 0.13
NPHP4-208ENST00000478423 FBXO11Q86XK2 927 aa15.85■□□□□ 0.13
NPHP4-208ENST00000478423 NARFQ9UHQ1 456 aa15.85■□□□□ 0.13
NPHP4-208ENST00000478423 HSF2BPO75031 334 aa15.84■□□□□ 0.13
NPHP4-208ENST00000478423 EVCP57679 992 aa15.84■□□□□ 0.13
NPHP4-208ENST00000478423 SYMPKQ92797 1274 aaKnown RBP15.84■□□□□ 0.13
NPHP4-208ENST00000478423 NUP58Q9BVL2 599 aa15.84■□□□□ 0.13
NPHP4-208ENST00000478423 MRPL44Q9H9J2 332 aaKnown RBP15.84■□□□□ 0.13
NPHP4-208ENST00000478423 TMEM232C9JQI7 657 aa15.84■□□□□ 0.13
NPHP4-208ENST00000478423 EXOC3O60645 756 aa15.84■□□□□ 0.13
NPHP4-208ENST00000478423 LINC00301Q8NCQ3 95 aa15.84■□□□□ 0.13
NPHP4-208ENST00000478423 DYNLL2Q96FJ2 89 aa15.84■□□□□ 0.13
NPHP4-208ENST00000478423 GPR101Q96P66 508 aaPredicted RBP15.84■□□□□ 0.13
NPHP4-208ENST00000478423 OVOS2A0A0J9YW53 1432 aa15.84■□□□□ 0.13
NPHP4-208ENST00000478423 CLRN2A0PK11 232 aa15.84■□□□□ 0.13
NPHP4-208ENST00000478423 LRMPQ12912 555 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms