RNA–Protein interactions for RNA: ENST00000478282.1

U2AF1-210, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 3,344 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-210ENST00000478282 FXR1P51114 621 aaKnown RBP eCLIP16.85■□□□□ 0.29
U2AF1-210ENST00000478282 STX17P56962 302 aa16.85■□□□□ 0.29
U2AF1-210ENST00000478282 UBE3CQ15386 1083 aa16.85■□□□□ 0.29
U2AF1-210ENST00000478282 NOM1Q5C9Z4 860 aaKnown RBP16.85■□□□□ 0.29
U2AF1-210ENST00000478282 TAF7LQ5H9L4 462 aa16.85■□□□□ 0.29
U2AF1-210ENST00000478282 ACBD3Q9H3P7 528 aa16.85■□□□□ 0.29
U2AF1-210ENST00000478282 MKRN1Q9UHC7 482 aaKnown RBP16.85■□□□□ 0.29
U2AF1-210ENST00000478282 IFIT3O14879 490 aaKnown RBP16.84■□□□□ 0.29
U2AF1-210ENST00000478282 TMTC1Q8IUR5 882 aa16.84■□□□□ 0.29
U2AF1-210ENST00000478282 TRIM22Q8IYM9 498 aa16.84■□□□□ 0.29
U2AF1-210ENST00000478282 ZBTB9Q96C00 473 aa16.84■□□□□ 0.29
U2AF1-210ENST00000478282 ZFP91Q96JP5 570 aaPredicted RBP16.84■□□□□ 0.29
U2AF1-210ENST00000478282 MED4Q9NPJ6 270 aa16.84■□□□□ 0.29
U2AF1-210ENST00000478282 TTF1Q15361 905 aaPredicted RBP16.84■□□□□ 0.29
U2AF1-210ENST00000478282 FOXR1Q6PIV2 292 aa16.84■□□□□ 0.29
U2AF1-210ENST00000478282 GOLGA6L1Q8N7Z2 621 aa16.84■□□□□ 0.29
U2AF1-210ENST00000478282 ANKRD36CQ5JPF3 1778 aa16.84■□□□□ 0.29
U2AF1-210ENST00000478282 NR5A1Q13285 461 aa16.83■□□□□ 0.29
U2AF1-210ENST00000478282 INTS5Q6P9B9 1019 aaKnown RBP16.83■□□□□ 0.29
U2AF1-210ENST00000478282 PLCD3Q8N3E9 789 aa16.83■□□□□ 0.29
U2AF1-210ENST00000478282 INCENPQ9NQS7 918 aa16.83■□□□□ 0.29
U2AF1-210ENST00000478282 WDR93Q6P2C0 686 aa16.83■□□□□ 0.28
U2AF1-210ENST00000478282 CTR9Q6PD62 1173 aa16.83■□□□□ 0.28
U2AF1-210ENST00000478282 NOA1Q8NC60 698 aaKnown RBP16.83■□□□□ 0.28
U2AF1-210ENST00000478282 CCDC85AQ96PX6 553 aaPredicted RBP16.83■□□□□ 0.28
U2AF1-210ENST00000478282 ISCA1Q9BUE6 129 aa16.83■□□□□ 0.28
U2AF1-210ENST00000478282 PIH1D3Q9NQM4 214 aaKnown RBP16.83■□□□□ 0.28
U2AF1-210ENST00000478282 ZSWIM5Q9P217 1185 aa16.83■□□□□ 0.28
U2AF1-210ENST00000478282 ZNF532Q9HCE3 1301 aa16.83■□□□□ 0.28
U2AF1-210ENST00000478282 LRRIQ3A6PVS8 624 aaPredicted RBP16.83■□□□□ 0.28
U2AF1-210ENST00000478282 ABL1P00519 1130 aa16.83■□□□□ 0.28
U2AF1-210ENST00000478282 ARHGAP25P42331 645 aa16.83■□□□□ 0.28
U2AF1-210ENST00000478282 ERVK-24P63145 666 aa16.83■□□□□ 0.28
U2AF1-210ENST00000478282 AATFQ9NY61 560 aaKnown RBP eCLIP16.83■□□□□ 0.28
U2AF1-210ENST00000478282 IDH1O75874 414 aaKnown RBP16.82■□□□□ 0.28
U2AF1-210ENST00000478282 AMPD2Q01433 879 aa16.82■□□□□ 0.28
U2AF1-210ENST00000478282 ALX1Q15699 326 aa16.82■□□□□ 0.28
U2AF1-210ENST00000478282 SH3RF1Q7Z6J0 888 aa16.82■□□□□ 0.28
U2AF1-210ENST00000478282 A0A087X0B3 334 aa16.82■□□□□ 0.28
U2AF1-210ENST00000478282 STARD3NLO95772 234 aa16.82■□□□□ 0.28
U2AF1-210ENST00000478282 MAGEA9P43362 315 aa16.82■□□□□ 0.28
U2AF1-210ENST00000478282 AFMP43652 599 aa16.82■□□□□ 0.28
U2AF1-210ENST00000478282 IFIT5Q13325 482 aaKnown RBP16.82■□□□□ 0.28
U2AF1-210ENST00000478282 ZNF512BQ96KM6 892 aaPredicted RBP16.82■□□□□ 0.28
U2AF1-210ENST00000478282 CNTNAP4Q9C0A0 1308 aa16.82■□□□□ 0.28
U2AF1-210ENST00000478282 MYO6Q9UM54 1294 aa16.82■□□□□ 0.28
U2AF1-210ENST00000478282 UBR3Q6ZT12 1888 aa16.82■□□□□ 0.28
U2AF1-210ENST00000478282 PHACTR2O75167 634 aa16.81■□□□□ 0.28
U2AF1-210ENST00000478282 DEXIO95424 95 aa16.81■□□□□ 0.28
U2AF1-210ENST00000478282 PDE6AP16499 860 aa16.81■□□□□ 0.28
U2AF1-210ENST00000478282 ATP2B1P20020 1258 aa16.81■□□□□ 0.28
U2AF1-210ENST00000478282 RTN1Q16799 776 aa16.81■□□□□ 0.28
U2AF1-210ENST00000478282 METTL24Q5JXM2 366 aa16.81■□□□□ 0.28
U2AF1-210ENST00000478282 LRRC31Q6UY01 552 aa16.81■□□□□ 0.28
U2AF1-210ENST00000478282 ABHD10Q9NUJ1 306 aa16.81■□□□□ 0.28
U2AF1-210ENST00000478282 PPP1R3GB7ZBB8 358 aa16.81■□□□□ 0.28
U2AF1-210ENST00000478282 PAGE5Q96GU1 130 aa16.81■□□□□ 0.28
U2AF1-210ENST00000478282 STRBPQ96SI9 672 aaKnown RBP16.81■□□□□ 0.28
U2AF1-210ENST00000478282 RC3H1Q5TC82 1133 aaKnown RBP16.81■□□□□ 0.28
U2AF1-210ENST00000478282 CYP26C1Q6V0L0 522 aa16.81■□□□□ 0.28
U2AF1-210ENST00000478282 OXER1Q8TDS5 423 aa16.81■□□□□ 0.28
U2AF1-210ENST00000478282 GSDMAQ96QA5 445 aa16.81■□□□□ 0.28
U2AF1-210ENST00000478282 FAM204AQ9H8W3 233 aa16.81■□□□□ 0.28
U2AF1-210ENST00000478282 VIPAS39Q9H9C1 493 aa16.81■□□□□ 0.28
U2AF1-210ENST00000478282 SCN7AQ01118 1682 aa16.81■□□□□ 0.28
U2AF1-210ENST00000478282 TIAM2Q8IVF5 1701 aa16.8■□□□□ 0.28
U2AF1-210ENST00000478282 PLSCR1O15162 318 aa16.8■□□□□ 0.28
U2AF1-210ENST00000478282 SMYD4Q8IYR2 804 aaPredicted RBP16.8■□□□□ 0.28
U2AF1-210ENST00000478282 MYH6P13533 1939 aa16.8■□□□□ 0.28
U2AF1-210ENST00000478282 TCRBV5S4A2TA0A5A2 114 aa16.8■□□□□ 0.28
U2AF1-210ENST00000478282 EIF3CLB5ME19 914 aaKnown RBP16.8■□□□□ 0.28
U2AF1-210ENST00000478282 CSF1RP07333 972 aa16.8■□□□□ 0.28
U2AF1-210ENST00000478282 CASP1P29466 404 aa16.8■□□□□ 0.28
U2AF1-210ENST00000478282 ATP6V1AP38606 617 aa16.8■□□□□ 0.28
U2AF1-210ENST00000478282 CTDSPL2Q05D32 466 aa16.8■□□□□ 0.28
U2AF1-210ENST00000478282 DPYDQ12882 1025 aa16.8■□□□□ 0.28
U2AF1-210ENST00000478282 AIDAQ96BJ3 306 aa16.8■□□□□ 0.28
U2AF1-210ENST00000478282 EIF3CQ99613 913 aaKnown RBP16.8■□□□□ 0.28
U2AF1-210ENST00000478282 PLA2G12BQ9BX93 195 aa16.8■□□□□ 0.28
U2AF1-210ENST00000478282 CNNM2Q9H8M5 875 aa16.8■□□□□ 0.28
U2AF1-210ENST00000478282 CABP5Q9NP86 173 aa16.8■□□□□ 0.28
U2AF1-210ENST00000478282 NUP98P52948 1817 aa16.8■□□□□ 0.28
U2AF1-210ENST00000478282 CCT6AP40227 531 aaKnown RBP16.8■□□□□ 0.28
U2AF1-210ENST00000478282 AARSP49588 968 aaKnown RBP eCLIP16.8■□□□□ 0.28
U2AF1-210ENST00000478282 NCAPH2Q6IBW4 605 aa16.8■□□□□ 0.28
U2AF1-210ENST00000478282 CRACR2BQ8N4Y2 399 aaPredicted RBP16.8■□□□□ 0.28
U2AF1-210ENST00000478282 LINC00116Q8NCU8 138 aa16.8■□□□□ 0.28
U2AF1-210ENST00000478282 CCDC148Q8NFR7 591 aa16.8■□□□□ 0.28
U2AF1-210ENST00000478282 EPB41L4AQ9HCS5 686 aaPredicted RBP16.8■□□□□ 0.28
U2AF1-210ENST00000478282 RIPOR2Q9Y4F9 1068 aa16.8■□□□□ 0.28
U2AF1-210ENST00000478282 TACC3Q9Y6A5 838 aa16.8■□□□□ 0.28
U2AF1-210ENST00000478282 IL6STP40189 918 aaPredicted RBP16.79■□□□□ 0.28
U2AF1-210ENST00000478282 TCIRG1Q13488 830 aa16.79■□□□□ 0.28
U2AF1-210ENST00000478282 EPSTI1Q96J88 318 aa16.79■□□□□ 0.28
U2AF1-210ENST00000478282 LIMA1Q9UHB6 759 aaKnown RBP16.79■□□□□ 0.28
U2AF1-210ENST00000478282 KRT31Q15323 416 aa16.79■□□□□ 0.28
U2AF1-210ENST00000478282 KRT23Q9C075 422 aa16.79■□□□□ 0.28
U2AF1-210ENST00000478282 NAPBQ9H115 298 aa16.79■□□□□ 0.28
U2AF1-210ENST00000478282 QSER1Q2KHR3 1735 aa16.78■□□□□ 0.28
U2AF1-210ENST00000478282 TRIM75PA6NK02 468 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms